Tachysurus fulvidraco (yellow catfish): 113649186
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Entry
113649186 CDS
T08119
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tfd00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
tfd01100
Metabolic pathways
Module
tfd_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
113649186 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
113649186 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tfd01003
]
113649186 (xylt1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
113649186 (xylt1)
Glycosyltransferases [BR:
tfd01003
]
O-Glycan biosynthesis
Glycosaminoglycan
113649186 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
113649186
NCBI-ProteinID:
XP_027012639
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All DBs
Position
15:2583431..2648744
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AA seq
911 aa
AA seq
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MMIGGPCARKSARRSRSALIAALTVLLVQTLIVWNFSSLDSGDDAENGGGAGGGGAGGTG
GAGREKRDRLGVNKADGEYARGRRQQPGKGTLRHKRQSDVYYSHRPREKVRVDSNNENSV
PKDFESIDNSNSAARLLAQRHASNKRQQETPEKVKSSNELVHYGQNRTGVRIRHDSALRQ
PTSPHHNQQVKKSGVATSEIKYDQPPKCEITGKEAISALSRAKTSECRQQIAEVYCRHKD
KQLMPEKVTRYCPLEGKASVNVHWEDDSMETVPAVPVRIAFALVVHGRAARQVMRLFKAI
YHTSHFYYIHVDKRSDYLHRQMLALAKRYPNVRVTTWRKATIWGGASLLSMYLQSMTDLL
AMSHWPWDFFINLSAADYPIRTNDQLVAFLSKYRNMNFIKSHGRDNARFIRKQGLDRLFY
ECDTHMWRLGDRKIPEGIAVDGGSDWFLLNRAFVEYVINSDDDLVTSMKRFYAYTLLPAE
SFFHTVLENSPHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQQ
TARPTFFARKFEASVNQEIVNQLDAFLFGSYPQGTPGLKAYWENVYDEPDGVHSLSDSLL
THYHAFARLGLARATNSLQGDAHDNHCRYFAMGHLVAVHIYFLYDEFQGYLVKHHATNLA
TSKLETLETWVMPKKFFKFTNSPNNFNRLQYAEIGSDWDAKERIFRNFGNLMGPMEELVG
MQKWAKGSNVTVTVVWIDPTNVIAATYDVLIDSTAEFTHYRPPLNTPLRPGMWTVRVLHH
WNAVAETRFLITPLTHHKHLPIRQDDALKMHNGPAKNSYMEQSFHGLNPILNIPVHLGQV
EEAERNAGLTGMRLEHWVDNLVGEAWAAADICSATPSGCPVLQSCRDTAWSSLSPDPKSQ
LGNPKANGTIR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcggcggtccgtgcgcgcgcaagtcggctcgccgctcgcgctccgctctgatc
gccgcgctcacggtgctgctcgtgcagacgctcatcgtgtggaacttcagcagcctggac
tcgggggacgacgcggagaacggcggcggtgccgggggtggtggtgccggtggtaccggt
ggcgcaggcagggagaaaagagaccggctcggtgtcaacaaagcggacggtgaatatgcg
aggggcaggaggcagcagcccgggaaaggaaccctgcgtcacaagcggcaatcggacgtc
tactactcgcaccgtcccagggagaaggtccgtgtggacagcaacaatgagaactccgtg
cccaaagacttcgagagcatcgacaacagcaactccgcggcacgtctcctggcgcagcgt
cacgcctccaacaagcggcaacaggagacgcccgagaaggtcaagagctccaatgagctt
gtgcactacggccagaaccgcaccggggtgaggatccgtcatgactccgccctcagacag
cccacttcaccgcatcacaaccagcaggtcaagaagtcgggcgttgctacatctgagatc
aaatacgaccagccgcccaaatgcgagatcacgggcaaagaggcaatctcagctctgtca
cgtgctaaaaccagtgagtgcagacagcagatcgcagaggtgtactgtcgacacaaagac
aagcaactcatgcctgagaaagtcactcgctactgccccctagagggtaaggcgagtgtg
aacgtgcactgggaggacgactccatggagacggtgccggctgtacctgtgcgcatcgcc
ttcgcgctggtggtccatggccgagccgcgcgccaagtgatgcgtctcttcaaagccatt
taccacacatcacatttctattacatccatgtggacaagcgctcagactacctccacagg
cagatgctagcactggctaagcgctacccaaatgtccgcgtgacgacctggcggaaggcg
acgatctggggtggagccagtctcctcagtatgtaccttcagagcatgacagacctgctg
gccatgagccactggccctgggacttcttcatcaacctgagcgctgccgactaccccatc
aggactaatgatcagctggtggctttcctttccaagtatcgcaacatgaacttcattaag
tctcatgggagagataatgctcgatttatcagaaagcagggcctggaccggctcttctac
gagtgtgatacacacatgtggcgcctgggggacaggaagattccagaaggcattgctgtg
gatggaggctctgattggttcttgctaaatcgcgccttcgtggagtacgtgatcaactcc
gatgacgacttggtcaccagcatgaagcgattctacgcttacactctcttgccagccgag
tcgttttttcacactgtgctggagaacagtcctcactgcgagagcatggtggacaacaac
ctgcgtatcaccaactggaaccggaaactgggctgcaagtgccagtataagcacattgtg
gactggtgtggttgctctcccaatgacttcaaaccgtctgatcttccacgcttccagcaa
acggctcggcccacgttttttgctcgcaagtttgaggccagcgtgaatcaggagatcgtg
aatcagctggatgccttcctatttggaagctatcctcaagggactccaggacttaaagcc
tactgggagaacgtatatgatgaacctgatggagtccacagcctcagtgattcgcttctc
acccactaccatgccttcgcccgcctcggcctggcacgagccacaaactccctgcaagga
gacgctcatgacaaccattgtaggtacttcgctatgggacatcttgtggctgtccatata
tacttcctatatgatgagttccagggatacctggtgaagcatcatgcaaccaatctggct
accagcaagctggaaaccctggagacctgggtgatgcctaagaagttcttcaaattcacc
aactcaccaaacaattttaacagactgcaatatgctgagatcgggtcagactgggatgct
aaggagagaattttccggaattttggtaacctgatggggccgatggaggagctggtgggg
atgcagaagtgggccaaagggtccaacgtgacagtgacggtggtgtggattgaccctact
aacgtgatcgctgccacctatgatgtcttaattgactccactgcagagttcacacactac
aggcctccgttgaacacaccgctccggccaggcatgtggactgtccgagtgctgcaccac
tggaacgccgtggccgaaacacgcttcctcatcacgccgcttacacaccacaaacatctg
cccatccgccaagatgatgccttgaaaatgcacaacggcccagccaagaacagctacatg
gagcagagcttccacgggcttaaccccatcctgaacatcccagtgcatttaggccaggtg
gaggaggcagagcgtaatgctgggctgacgggtatgaggttagagcactgggtggacaac
ctggttggcgaggcctgggcagctgcagacatttgctcggcaacgccctctggctgtccg
gtcctgcaatcgtgcagggacacggcatggagctcacttagccccgatcccaaatcacag
cttgggaatcccaaagctaacggcaccataaggtag
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