Tachysurus fulvidraco (yellow catfish): 113649205
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Entry
113649205 CDS
T08119
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tfd01001
]
113649205 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tfd04054
]
113649205 (ciita)
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
113649205 (ciita)
Protein kinases [BR:
tfd01001
]
Serine/threonine kinases: Other
TAF1 family
113649205 (ciita)
Pattern recognition receptors [BR:
tfd04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113649205 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
nSTAND3
nSTAND_NTPase5
AAA_16
NB-ARC
AAA_25
AAA_22
RsgA_GTPase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
113649205
NCBI-ProteinID:
XP_027012677
LinkDB
All DBs
Position
15:2400253..2413913
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AA seq
1146 aa
AA seq
DB search
MVPFKEVLSEVRKVLQEENLLPSLLAQLVEAQIFSAQYYQTFISENLCDVDVDEMARRLA
LPVWEKWDASKVILSSVLMENEPENHEPEDIMTNVDQGETPPDRLLDLIVSTPLEEFPFE
EFLDTSYSDDVWDAVADGLEDKATLVCEVYDKISPARKVRKRKRGDVGRGSEKTPRSKRS
KRSLIPSSPPKRCETAPGFTTTVQEGDFHKNDVSSLIHFPLTIATTASLMPSGAPGMQII
QTFNPLSSPVIKSILPVGHTYVLVSPQSLTPVPVPQIAPLSPLDGTVAPLELSMFIQPAS
SLSDSASRSRSPSQSAPVSPSEEKPPTKEHLPATQDIKKMPVIPENVQNFIKRFKSHLGE
TCSVMQEGMSMESHYIDTPLVQRKLIIRTGKNANKCLEKELVVLSDSERTKGMMHRSHVF
QNCGSNNKHLITVLGKAGMGKSTLIQRLALDWSSGGLQQFQFIFLLNCKVLDLTQTCFSL
KSLLLDSSTCPRCDDPEAVFKHVLAFPENVLVVFDSFDELKDLEGLLQSPATSPTDGNYS
VRQLFSGLFQKRILSGCTVLIVTRPKDVLNQLLRKVDRILEICCFSPKDIETYVSNYFAD
ESEKEDTLKKIKKQKYIFSLCSNPLLCRLTCFLAKHQTSSGLPSTLTDLYQRVLSRCLEP
NDDLQGSRQDFVKLCNVAWDGFKTQNSLLDQNQNQNLLDYGLSSGILMTHSLNVEQSNSK
VTYFANLFVQNLLSALFLVHSRELNDKTLLAQTTLHQRKKKFQGEWQNLLQQFTMGLLFQ
KNSPPCCRVFQNNADLQPKRKAVEVHLENLKPGELIPSRLLELFHCVYEAKNVKLAKLLV
KNLPDNLSFCGAQLSPVDHYVVWHLLSQTKGLKRTFSVDLRDTCVPLGGLKELVTLDIVA
SFRAPTMDTINLWEDLHRSSDQPSLKNSIKKFTINPLKVSQVSHVENLVVLVQIHKEKKL
PLCEVESALEDGVPAVRHLHKLEYELGQQHNPEVFLQLVEILPALQSLHHLDLENNKMGD
DEAAQLAGVLSSLSSLKLLNLSQNCIGDGGVRRLSETLPSASSLQSLSLYGNVIGDGGAE
SLAAVLPLMTSLLDLDVKYNKFTDVGAKKLGAALKNSSSVTSLQMWNDCIPFGVLDHLQI
QDCRIN
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctttcaaagaggttctttctgaagtgaggaaggtcctgcaggaggagaacctc
cttccttcacttcttgcccagcttgtagaggctcagatcttctcagctcagtactaccag
acctttatttcggagaatctgtgcgatgtggatgtagatgaaatggcaaggagactcgcg
ctccctgtttgggagaaatgggatgccagtaaagtcatcctctcctcagtgctcatggag
aatgagccagagaaccatgaacctgaagacatcatgactaatgtggatcaaggggaaaca
cctcctgaccggttactggacctcatcgtctccactccgcttgaagaatttccatttgaa
gaatttctcgacacgagttactcagatgacgtctgggacgctgtcgcagatggactagaa
gataaagccacactggtttgtgaagtttacgacaagatctcacctgcccgaaaagtgcgc
aaaaggaagcgtggagatgttggacgaggatcagagaaaacacctcgctctaaacgcagt
aaaagaagtctcatcccgtcatcacccccaaagagatgtgaaacagcccctgggttcact
acgactgtgcaggaaggggatttccacaaaaatgacgtgtcctcacttattcatttccca
ttaacgatagccaccactgcctctctgatgccatctggtgcaccaggaatgcaaatcata
caaacattcaatcctctttcttctccggtcattaaaagcattcttccagttggccacacc
tacgttttggtttcacctcagtctctgactccagtgccggtaccacagatcgcccctctg
tcacctctggacggtacagtggctcctttagagctcagcatgttcatccaacctgcaagc
tcgttatcggacagtgcgagtcggagtcggtctccgtcccaatcggctcctgtttcaccc
tcagaagaaaaaccacccaccaaggagcatcttcctgcaacccaggacatcaagaagatg
ccagtgataccagaaaatgttcaaaactttatcaagcgttttaaatcccacctcggagaa
acgtgcagcgtgatgcaagaaggaatgagcatggaatcgcactacatagacacgccgctg
gtgcagaggaagcttattatcaggaccggcaagaacgcaaacaaatgtctggagaaggaa
ctcgtggtgctcagtgactccgagcggacgaaaggtatgatgcacaggagccatgttttc
cagaactgtgggtccaacaacaaacacctaatcaccgtcctcgggaaagccggcatggga
aaaagcactttaatccagcgcttggccttggactggtccagcggtggccttcaacagttc
cagtttatctttttactaaattgcaaggttctcgatctgactcagacctgcttcagtttg
aagagtttgcttctcgactcgtccacgtgtcctcggtgtgacgatccagaagccgtcttc
aaacacgtcctcgccttcccggagaacgtcctcgtagtcttcgacagtttcgatgaattg
aaggacctcgaagggctccttcagtcacctgctacctcgcccacggatggaaactacagt
gtcaggcagctgttttccggtttgttccaaaaaaggatcctgtcaggttgcacggtttta
atcgtcacccgacccaaagacgtcttgaaccagcttctgcgtaaagtagaccggatcttg
gagatatgttgcttttctccgaaggacatagaaacgtacgtgtcaaactattttgcggac
gaatcagagaaagaggatacactaaaaaaaataaaaaaacagaagtacattttcagctta
tgctcgaaccctttgctgtgtcgccttacatgctttttggcgaagcatcagacgagcagc
ggtttaccttcgactcttacggatttataccaaagagtgcttagccggtgtcttgagccg
aacgatgaccttcagggatccagacaggatttcgtgaagttgtgcaacgtagcatgggat
ggatttaagactcaaaactcccttttagaccaaaatcaaaaccaaaacttgctagactac
ggtctgagctccgggatactcatgacgcattcgctaaacgtagaacagagcaacagcaag
gtgacttattttgctaatctttttgtgcagaaccttctgagtgctttgtttttggtgcat
tccagagagttgaacgataaaacactgctggcacagaccacactccaccaacggaagaag
aagtttcagggagaatggcagaacctgcttcagcagttcacaatgggattactcttccag
aaaaactctcctccttgctgtagggttttccaaaacaatgctgacctccagccaaagaga
aaagcagtggaagtccatctggagaatctgaagccgggtgagctgatccccagcaggtta
ctggaactgtttcactgtgtgtacgaggccaaaaatgtcaaactcgccaaacttctggtc
aaaaaccttcctgacaatctgtcgttttgtggagctcagctctctccagtggaccactat
gtggtttggcatcttctctcacaaaccaaagggctgaagcggacgttctccgtcgacttg
agggacacgtgtgttcctctcggtggtctcaaagagctggtcacgctggacatcgtggca
tcgttccgggcacctacgatggacaccattaacctgtgggaggatctgcatcgcagcagc
gatcaacccagtttgaaaaacagcatcaaaaagtttactataaatcctctgaaggtgtcg
caggtgtctcatgtggagaacctggtggttcttgtacaaatccacaaggagaagaagctg
ccgttatgcgaggtcgagtcggctctggaagacggcgttcctgcagtgagacatcttcac
aagctggagtatgagctcggtcagcagcacaaccctgaggttttcctccagctggtggag
atcttacctgctcttcagtctctacatcacctggatctggagaataacaaaatgggagat
gatgaagctgcgcagttagctggtgtcctgagctcactgtcgtctctgaagctgctgaat
ctttctcagaactgtatcggagacggcggagtgcggcgactgtctgagacgctgccgtcc
gcgtcctcgctgcagagcctcagtctgtatgggaacgtgatcggggacggcggagctgag
agcctggcggcggttttaccgctcatgacgtctctgctggacctggatgtaaagtacaac
aagttcacagacgtcggagccaaaaagctcggcgctgcgttaaagaactcatcgagtgtg
acatctcttcaaatgtggaacgactgtattccttttggagttttggatcatcttcagatt
caagactgcaggataaattaa
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