Tachysurus fulvidraco (yellow catfish): 113649271
Help
Entry
113649271 CDS
T08119
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113649271 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113649271 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Alanine_zipper
EGF_Teneurin
RNAseD_HRDC_C
Death
SlyX
Motif
Other DBs
NCBI-GeneID:
113649271
NCBI-ProteinID:
XP_047672803
LinkDB
All DBs
Position
1:21643448..21698908
Genome browser
AA seq
1612 aa
AA seq
DB search
MVLFLTGGKGQDARRHKIMRCAALVLSLLTLCATRVHAAMDECVDESNQHAQRCLPEFYN
AAFNVTVVATNTCGSPPEEYCVQTGVTGVTKSCHICDARDPRLHHSAVYLTDYNNQADTT
WWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWIPYQ
YYSGSCEKTYSKTNRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDN
SPVLQNWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECV
KNEYSRLVCNCKHNTEGDDCNVCKPFYNDHPWRRATADNANECQQCNCNGKSNECFFDPA
LFRATGHGGHCRNCAHNTDGPNCERCLDNYYRLDPAQHCLPCSCNPVGSLSTQCDTTGRC
SCKPGVMGDKCDRCQPGYHSLSEAGCSPCSCNPAGSTQECDVSTGRCQCKENVDGFSCDR
CKLGFFNLDVQNPQGCTPCFCFHHSTVCESAEGYSIHTITSNFERGDESWKGQRRDGSSV
PVQWSPTSQEISLMSEDYFPMYFVAPEKFLGNHILSYGQNLTLHFRVDRRDARLSEEDIV
LEGAGQRIAVPLIAQGNAYPEDQIKTFVFRLHHTPDSPWRPVLRHTEFQKLLHNLTSIKI
RGTYSERSAGYLDSVSLVTARRGHGEPARWVEKCSCPAGYEGQHCGKCTLGYRRSQPELG
QYSPCETCNCNGHSDTCDPVTGMCDCEDNTAGMSCERCKDGFYGDATAGSPSDCKPCPCP
AGATCALVPKTKEVVCTNCPLGTTGKRCELCDDGFFGNPQGINGQMRPCRACNCNSNIDP
NAVGNCDRDSGECLKCIYNTNGFFCDRCKEGYYGNALATNPADKCKPCTCSPHGTVDRQK
TCMQVTGQCECLPHVTKRDCSACEPGYYDLKSGDGCQRCNCNPIGSTNGQCDIETGQCEC
QPGVKGQHCERCEVNFFGFSSSGCKPCDCDPEGSRTAQCRDNGRCECRPGFVGNRCDMCE
ENYFYNRSVSGCQQCPNCYSLVRDKVNQQRQKLHDLQNLIDNLGSQDTVSDKAFEDRLKE
AEKTIMDLLKEAQASKELDSDLLDRLRNLNNTLTTQWNRLQNIRNTVDNTGDLADKARGR
VHETEKLIERARDELDKAKDAISKVDIKIPTTTGDPNNMTLLAEEARSLAEKHKTDADQI
EKIAKDANDTSTKAYNLLMKTLDSESKINKDIDDLNKKYNEAKDLAKNLEKQATKIRTEA
EEAGDKAMKIYANLTSLPPFDVKSLEDEANKIKKEASDLDKLIDKTEREYNDLREDLRGK
ENDVRRLLEKGKTEQQTADQLLARADAAKALAEEAAKKGLSTFQEAQDILNNLRDFDKRV
NDNKTTAEEALRRIPQINATINAANEKTRQAEAALGNAVANAKEAKSKAEEAEKIANNVQ
KGSAKTKAEAEKAFGDTMKLDDEVKDMMKQLADAEKELEKKKDEAAQDMMMASMASDNAK
EAEENARKAKNSVRTVLSAITDLLGQLGNIDKVDLSKLEQINRSLNEAKEKMAGSDLDRK
LKELNDVAKSQEDMISDYDRQIREIRADIANLNDIKNTLPNGCFNTPSLERP
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggttttatttctaactgggggaaagggccaggacgcacggagacacaaaataatgcgc
tgcgcggctcttgtgttgagtttactgactttgtgcgcaacgcgcgttcacgcagcaatg
gacgagtgcgtggacgagtcgaaccaacacgctcagcgctgcttgcctgagttctataac
gcggcgttcaacgtgaccgttgtggccactaacacgtgcggatcaccgcctgaagaatac
tgcgtgcaaaccggcgtgaccggagtcacaaagtcgtgccacatctgcgatgcccgagat
ccgagactacatcacagcgccgtctacctcaccgattacaacaaccaagcggacaccacc
tggtggcaaagccagaccatgctagcaggcgtccagtaccccagttccatcaacttaacc
ctgcacctaggcaaggcctttgacatcacctacgtacgtctcaagttccacaccagtcgc
ccagagagcttcgccatctacaagcgcacgagcgaggatggcccatggatcccgtaccag
tactacagcggctcgtgcgagaaaacctacagcaagacgaaccgcggattcatccgcacc
ggcgaagacgagcagcaggctctctgcacggatgagttcagcgacatctctccgctcact
ggaggaaacgtggccttctcgacactcgagggccgccccagcgcatacaactttgacaat
agcccggtgcttcagaattgggtgactgcaacagacatcagagtgaccctgaacaggctg
aacacgtttggagacgaagtgttcaatgaccccaaagtcctcaagtcgtactactacgcc
atctccgacttcgccgtaggaggaaggtgcaaatgtaacggtcatgccagcgagtgtgtg
aagaatgaatacagcaggttggtgtgtaactgcaagcacaacaccgagggtgatgactgc
aacgtgtgtaagcccttctataacgaccacccatggagaagagccacggctgacaacgcc
aacgagtgtcagcaatgcaactgcaacggcaagagcaacgaatgcttttttgacccggct
ctgttccgtgccacgggtcacggaggtcactgccgcaactgcgcccacaacacggacgga
cccaactgtgagcgctgccttgacaactactacagactggatccagcccagcactgcctg
ccctgcagctgtaaccctgttggctctctgagcactcagtgtgacacaacaggacgttgc
agttgcaaaccgggagtcatgggagataagtgtgaccgctgccagcctgggtaccactcg
ctgtctgaggcgggctgcagtccctgctcctgcaaccctgccggaagcacacaggagtgt
gatgtcagtacgggacgctgtcagtgtaaggaaaatgtggacggcttcagctgtgacagg
tgtaaactaggcttcttcaacctggatgttcagaatcctcagggatgtacgccgtgcttc
tgcttccatcattccaccgtgtgcgagagcgccgagggctacagcatacacaccatcacg
tccaacttcgaacgaggtgacgaaagctggaagggtcagcggagagacggctccagcgtg
ccagtgcagtggtctccgacctctcaggagatctcgctcatgtcagaagattacttcccc
atgtactttgtggctccagaaaaatttttggggaaccacatcctgagctacggtcagaac
ctgactctccatttccgggtggatcggcgcgatgctcgcctttcagaagaggacattgtg
cttgaaggggcggggcagcgcatcgccgtgccactcatcgctcagggaaacgcttacccc
gaagaccaaataaagacctttgtgttcaggctccatcacacccctgactctccctggaga
ccagtgctgaggcacacagagttccagaagcttctccacaacctgacgtccatcaagatc
cgcggaacctacagcgagagaagtgctgggtatctggacagcgtgtctctggtgaccgct
cggcgaggtcacggagagccagcgcgctgggtggagaagtgttcgtgtcctgccggctac
gagggtcagcactgtggcaaatgcactctgggatacaggaggagccaaccggagctgggt
caatacagcccctgtgaaacttgcaactgcaacggccacagcgacacctgcgaccctgta
acaggaatgtgtgactgcgaggacaatactgctggcatgagctgcgagaggtgtaaggac
ggtttctatggcgatgccacggcgggttcaccatctgactgtaaaccttgcccatgtcct
gcaggcgccacctgcgctcttgttcccaaaactaaagaggtggtgtgcaccaactgtccg
ctcggcaccacagggaaacgatgcgagctgtgcgacgacggattcttcggcaacccgcaa
ggcatcaacggtcaaatgaggccgtgccgtgcgtgcaactgcaacagcaacattgacccc
aacgctgtgggcaactgcgatcgagacagcggcgagtgcctcaagtgcatctacaacacg
aacggctttttctgcgatcgctgcaaagaaggttactacggcaacgccttggctaccaac
ccagcagataagtgcaaaccttgcacctgctcacctcacggcaccgtggacaggcagaag
acctgcatgcaagtaacggggcagtgtgagtgtctccctcatgtcaccaagcgagactgc
agcgcctgtgagcccggctactacgacctgaaaagtggagacggctgccaaaggtgcaac
tgcaaccctatcggctctactaacggccagtgcgacattgagaccggacaatgcgagtgt
cagcccggggtcaaagggcagcactgcgagcgctgcgaagtcaacttcttcggcttcagc
tcatccggatgcaaaccctgcgactgtgaccctgagggctcgcgtacagctcaatgcaga
gacaacggccgttgcgagtgtcgccccggcttcgtcggtaaccgctgcgatatgtgcgag
gagaactacttctacaaccgctctgtttcaggctgccagcagtgtcccaactgctacagt
ctcgtcagggacaaggtgaaccagcagagacagaagctccatgacctgcagaatctgatc
gacaacctgggcagccaggacacagtgagtgacaaagccttcgaagaccgtctcaaggag
gctgagaaaaccatcatggatctgttaaaggaggctcaggccagcaaagagttggacagt
gacctgttggatcgcctgaggaacctcaacaacacgctgacaacacagtggaaccggctg
cagaacatccggaacacggtggacaacaccggagacctggcggacaaggcacgcggcagg
gtgcatgagacggaaaaactcatcgagcgggcgagagatgagctggacaaagcaaaggat
gccatcagcaaagtggatatcaaaattcccacaaccactggagatccaaacaacatgaca
ctcctggctgaggaggctcgcagtctggcagagaagcataagacggatgcagatcagatt
gaaaaaattgccaaagatgccaacgacacttcaacgaaggcctacaacctgctgatgaag
actctggacagtgaaagcaagatcaacaaggacatcgatgacctgaacaagaagtacaat
gaggccaaggacctggccaagaacctggagaaacaggccactaaaatccgaaccgaagca
gaagaagcaggagacaaagccatgaagatctacgctaacctgaccagcctgcctccattt
gatgtcaaatcactagaggatgaagccaataaaattaagaaggaggcgtcagacctggat
aagctcatcgataaaaccgagagggaatacaacgacctgagagaagacctgagaggcaaa
gaaaacgatgtccgcagactgctggaaaagggcaagaccgagcaacagacagcggatcag
ttgctggcgcgcgcggatgcagccaaggctctggcagaagaggcagctaagaaaggcctt
tccacattccaggaggcccaggacatcctcaacaacctccgagacttcgataagcgagtg
aacgacaacaagaccacagcggaggaggcactgagacgtattccgcaaatcaatgcgacg
atcaacgcagccaatgagaagacccggcaggccgaggcagccctgggcaacgcggtggcc
aacgccaaagaagccaaatccaaggcggaggaagctgagaagatcgccaacaacgttcag
aagggttcggctaaaaccaaagccgaggcagagaaagcctttggcgacacaatgaaactg
gacgacgaggtgaaggacatgatgaagcagctggcagacgcagaaaaggagctggagaag
aagaaagacgaggcagcacaggacatgatgatggcttcgatggcatcagacaacgccaag
gaagcagaagaaaatgcccgcaaagccaaaaactccgtccgcaccgttctcagcgccatc
accgacttactcggccaactgggcaacatcgacaaggtggacttgagcaaactggagcag
atcaacagatcgctaaacgaagccaaggagaaaatggcgggcagcgacctggataggaag
ctgaaggagctgaacgatgtggccaagagccaagaggatatgatcagcgattacgaccgg
cagatccgtgagatccgcgccgacatcgccaacctgaacgacatcaagaacactcttcct
aatggctgcttcaacacgccatccctcgagcggccttaa
DBGET
integrated database retrieval system
