Tachysurus fulvidraco (yellow catfish): 113649351
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Entry
113649351 CDS
T08119
Symbol
hmbox1a
Name
(RefSeq) homeobox-containing protein 1a isoform X1
KO
K24885
homeobox-containing protein 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113649351 (hmbox1a)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113649351 (hmbox1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_31
CUT
HTH_37
NOC3p
Motif
Other DBs
NCBI-GeneID:
113649351
NCBI-ProteinID:
XP_027012897
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All DBs
Position
12:complement(1068158..1078319)
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AA seq
440 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRGSGMTKQEILHALDTLERLEREHVQKFGPRHPHAGGTR
GGGGGGGVGSHGSSSSAAPSSTAPTSPSSASVATQTVFHGSTPSPSPTSYDTSPPPTITV
PMGVVALAAQNGRDSLAPVSNGKLSPTQYPVPARAFGFEPAEEEVDIDDRVEELMRKDSN
IIKEEIKAFLGSRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTT
PGATLAMRPAPMALEDIVEWHQSAPPINCSPGSFRLRRGSRFTWRKECLAVMESYFNDNQ
YPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILET
HGLDVQSPGGHSNSDEIDGNDFSEPGAEPGLGTDESTGASEHQDPISLAVEMAAVNHSIL
ALSQQGRGGSDVKAEVLDDD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattacaccgacgagcctcgctttaccatcgagcagatcgatctgctgcagcgg
ctgcgcgggagcggcatgacgaagcaggagatcctacatgcactggacacgttggagcgt
ctggagcgcgagcatgtgcagaagtttggcccacgtcacccccatgctggagggacgaga
ggaggaggaggaggtggaggcgtcggcagccacggcagctccagttccgcggcaccgtcc
agcaccgctcccacttcgccttcatctgcctctgtggccactcagaccgtgttccacggc
agtactccgtccccgtcaccgaccagctacgacacctcaccgccccccaccatcaccgtg
cccatgggtgtggtggcgctggcagctcaaaacggccgcgacagcttagcgcctgtcagc
aatgggaagctgtcgcctactcagtatcccgtacctgctcgggccttcggctttgagccc
gccgaggaggaagtggacatcgatgaccgcgtggaggagctcatgagaaaggacagtaat
ataattaaagaggagatcaaggccttcttagggagccggagaatttcacaagccgtcgtc
gctcaagtcacaggcatcagtcagagtcggatctcccactggctcctgcagcagggttct
gacctgagcgagcagaagaagagagccttctatcgctggtaccagttggagaagaccaca
cctggtgccactctggctatgagacccgcccccatggcactggaggacatcgtagagtgg
caccagagcgctccgcccatcaactgcagccccgggagcttccgcctgcgccgtggcagc
cgcttcacctggaggaaagagtgtctcgctgtcatggagagttactttaatgacaaccag
tatcctgacgaggccaagagggaggaaatcgccaacgcctgcaacgccgtgatacagaag
ccagggaagaagctctctgatctagagcgggtcacgtctctaaaagtgtacaactggttt
gcgaaccggcgaaaggagattaagagaagagccaatatagaagcagcaatcctggagact
catgggcttgacgtgcagagtccaggtggtcactccaacagtgacgagatcgacggcaac
gacttcagcgagccgggcgccgagccggggttagggacggacgagagcacgggagcgagc
gagcaccaggaccccatcagcctggcagtggagatggcggcagtcaatcactccatcctg
gcgctgtcacagcagggcaggggcggcagcgacgtcaaggccgaggtgcttgatgacgac
tga
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