Tachysurus fulvidraco (yellow catfish): 113649368
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Entry
113649368 CDS
T08119
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113649368 (jmjd1cb)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
113649368 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
zf-C5HC2
C1_2
Motif
Other DBs
NCBI-GeneID:
113649368
NCBI-ProteinID:
XP_047673644
LinkDB
All DBs
Position
8:complement(26073658..26187570)
Genome browser
AA seq
2582 aa
AA seq
DB search
MAVVVEARPELVGKRFLCVSGEAPPELAEIVHWPWRVGVIRAVSHRDTDNPELTVYVEFD
DLEWEKREWVKVYEDFQIFLLEQQLVWAKRKESSQLQGTRAKQIQWPALTFKPLVGKSVL
GSITAVEFFSDRQLDFLTDDGACQPYQDEVDNLSPVLRDNPQLHEEVKSWVKDQKVQEIF
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRTMVVMNDQVLEPQNVDPSMVQMTF
LDNVVHSLLKGENIGITSRRRSRSSQNSNTAHQTTGGRPSGNTGSTQGHYTRAQANSPRP
VMNSSSSATKQGSQAQQQQSQHAQQQVSQQHQQQLQSSPGQQRLSRSTRRKGSDSSIPDD
DKIKEEKMDSGGGRGDVTRNKSKQMVSKRRKAEDEEKKAGLKRIKMEASDLSESSDSENS
NKRHLDSSSEPCSENELKSKSSLKASEEEENSQSCKDLEEPDANSRMSPWGEESTVDKIV
KPTAMEVVPTAKSEHTGERRSPVQPPLQPPPSPCAHPQNLGPAEVQGCIVEIKSTVKTLP
KDHFSAGAQRTHTPKCVIDITEESSSHPTARENLEAVSALLASQKHETFVPEARHVVLNP
SASECRKPEGELQHHLGQNFGSKIEFANSEVIRPVASVSESAAVAEREREKIQQQYPSIM
PCIKNASLAEDVRKPQKLSSSPDVAKSKSNPSPDTFNPKCNPSPDAMKSKTHSVLEAMKP
KPNTSPEVTKHKGRHNDNPPSAVARLSAKPDAEIPRSSFKPVPARTNPSESTKSPLIVDK
NEHFTVYRDPALVRPEAKNNHVTYLPPHLHPLHSSSHATCLTPSSHHHSHLLPASSLSPH
PSVHHPLLPTVLPAIPPTSLLGGHPRLDSGGLSHLALAHHHSHQQQQFLQQQPPPPLLPQ
THGGAGYNQLGLYPIIWQYHNGTQHSYPPGLSLPGSKWVHPENAVNSDVSLPRNTSSPWL
HQPTPVSSADSLGILSHVPGRPASADPHRPLKITSHSSPPLSKTSADHHKGELESKVFVD
PMRGLVTAHLKQEPDRSRTPNSIELQRLYMDSSHIKQQTQQPPRLPLDNPDRATKYKEEN
RRILQESIEVAPFTAKIRSGELEREPYARIPSLPISGPPKENEHSSSDLYKYKHSAVQSL
PQSNYFTTLSNSVVNEPPRLYPSKELNSLSVSSPLSLGSYTSSRGSAKSLSKPPPLIKHQ
PESEGLVGKISEQLSQQVALNPLSTTAAASERHSPAVSPSNQLRSMPALHRAPVFHPPTQ
QTLDRKEAGCGRLSPPTLTPIQPVSVAGKVSEQQKPPTLLPELREVKSSVDLGSSESWRP
DSQSHDKTAQWHSDKSEGKPQAATASVIVRSRTCIKYDSSPGSKTGTKETSVSRPHTGKN
QLDCTKLTETREPGRVIQQNTNREDFFLQYKKNFVRVSQGSFPSSAVAVVNSKCNSSNDV
TTSASAASTYNALSRGTTELPYPTPAAQSSCNINRLDAPVPKCRTPTGPELQECNARTSS
PSGQLLQPGLSPAPQPYSGNFIHLKKHKAALAAAQSRGSSSASESEGSSRSSQESPTIIN
QDRASPGNPASKACPLPNGQSSQMNQPNYHKLKKAWLTRHSEEDRNTNKVEKMPDAVSEI
IKPCTVNLVASTSSDAEIGKDGKCLEDKMSLEERKPRRGPSKRPHDSGSDSGDDSDGSDS
KQEQRAKRQPKPTYKKKQNDMQKKKGENDKDEDDIKPNGIFRSAKEKTKLKLASSNGIPR
SVLKDWRKVKKLKQTCESFLQDDSCSEIGPNLQKCRECRSIRTKKGEEPTHSPVFCRFYY
FRRLSYSKNGVIRIDGFSYPDQHDEEALSLWAPDACEENDLDLETSKYILSYIGDKFCQL
VMSEKTAATWIKKDAKIAWKRAVRGVRESCDACEATLFNIHWVCQKCGFVVCLDCYKAKE
KKNSKDKELYTWLKCVKGQPHDHKHLMPTQIIPGTVLTDVVNAMHMLREKFGIKGHCTCA
NKQNILNKLPSTNGVSQVLQNVLNHSNKLSLCKPEAGQHNLGQKVEANGGSSPASDTSTD
SKLTPPESQSPLHFLADLAEQKSREEKKENKESVVGKVKEENSDALETLHCKASSLVANS
TEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTASQTGKSRTMPNILDDIIASVVENK
IPADRSTKQSPKAKPQEEAKTERKRQAEDMPEQHADIPHCWLHDRRLLWLKDHRNSNNWK
LFRECWKQGQPVLVSGVHKKLNTSLWKAEAFSQEFADHQGDLLNCKDGVVSNSGIKEFWD
GFDDLTKRPKSRDGEAIVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGNLNLA
SHLPSFFVRPDLGPRLCCAYGVASSQEQDFGTANLHMEVSDVVSVLVYVGVAKGNGVLSK
TGVLKRLEEEDLDDHVKKRLKDSSETPGALWHVYASKDLEKVKEFLHKISKEQGVEIPPE
HDPIREPGWYLSRKQRQRLQEEHSIQGSTIVQFLGDSVLVPAGALHQVQNLHSCIQVIND
FVSPEHVVHSFHLTQELRSSKEEINYEDKLQVKNIFYHCVKDAVGTLKRCSAEAQEEEEA
NS
NT seq
7749 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggttgtggaagcgcggccggagctggtggggaagcggttcctgtgtgtgagc
ggagaggcgccgccggagctcgcggagatcgtgcactggccgtggcgtgtgggggtcata
cgcgccgtgagccaccgcgacaccgacaatcccgaactcacggtatacgtagagtttgat
gacctggagtgggagaagcgtgagtgggtgaaggtgtatgaagactttcagatctttctc
ctggagcagcagcttgtctgggctaagaggaaagaaagctcacaactgcagggcacccgg
gccaaacagatccagtggcctgctttgacattcaagcctctggtaggaaaaagtgttctg
ggctccatcaccgctgtggaattcttctccgacagacagctggacttcctgaccgatgac
ggtgcatgccagccctatcaggatgaagtggacaacttgagtcctgttctcagggacaat
ccacagcttcatgaagaagtgaaaagctgggtaaaagaccaaaaggtgcaggaaatattt
atgcaaggtccctattctttaaatggataccgcgtacgagtttacaggcaagactcagcc
acccagtggttcacgggcatcattactcatcacgacctcttcagccgcactatggttgtg
atgaatgatcaggtactagagcctcagaacgttgatccctctatggtacagatgaccttt
ctggacaatgtggtccattctttgttgaaaggagaaaatataggcatcacatccagaagg
agatcacgctctagccagaatagcaacactgcccatcagaccacaggagggagaccaagt
ggcaacacaggaagcactcagggtcattacacacgtgcccaggccaacagtcccagaccg
gtgatgaactcatcaagctccgctaccaagcagggttcacaggcccagcagcaacagtcc
cagcatgctcagcagcaggtatcccagcagcaccaacaacagctgcagtcatcaccaggg
caacagcgcttgtcccgatcaacacgtaggaaaggatcagacagcagcatcccagatgat
gataagatcaaagaggaaaagatggactctggaggtggaagaggagatgttacaaggaac
aaatcaaaacagatggtgagcaaaaggaggaaagctgaagatgaagagaagaaggctggc
cttaaacggataaagatggaggcatcagatctttcagagagcagcgactctgagaactcc
aataagaggcacctggactcatcctcagaaccatgctctgaaaatgaactgaaaagtaag
agcagtttaaaagccagtgaggaagaggagaattcccagagctgcaaggatctcgaggag
cctgatgccaatagcaggatgtcaccctggggggaggaatctactgtagataagattgtc
aaaccaacagccatggaagtggtgcccactgccaagagcgaacatacaggggagaggagg
tccccggtacagcctcccctacagccccctcccagcccctgtgcacaccctcagaactta
ggtcctgctgaggttcaggggtgcattgtggaaataaaaagcactgtgaaaactctcccc
aaggaccattttagcgcaggggcacaaagaacacacacaccaaagtgtgtaattgacatc
acagaggaatctagctcccacccgacagccagagagaacttagaggctgtgtctgccctt
ttggcctctcagaaacatgaaacttttgtccctgaagccagacatgttgtgctaaacccc
tcagcctctgaatgcaggaagccagagggtgagctgcagcatcacctaggccagaacttt
ggcagcaagatagaatttgccaactctgaggttatccgacctgtggcttcggtaagcgaa
tcagctgctgtggccgaaagagaaagggagaaaatacagcagcagtacccttcaatcatg
ccttgcatcaagaatgcttcactcgctgaagatgttcgaaaaccacagaaacttagctca
tcaccagatgtggccaagtccaagtccaacccttcacctgacacctttaatcccaagtgc
aatccctcacctgacgccatgaagtcgaaaacccacagtgtcctggaggccatgaagcct
aaaccaaacacttcccctgaagtgaccaaacacaaaggacgacacaatgacaaccccccg
tccgctgttgcccggttgtctgctaagccagatgcagaaatcccacgttccagcttcaag
cctgttcctgctcgaactaatccctctgagtccaccaagagccctctgatcgtcgacaaa
aatgagcactttacagtgtatcgtgacccagcactggtgcggcccgaggccaagaacaac
catgttacttaccttcctccccacctccatccactccacagctcctctcacgctacttgc
ctgacacctagctcacaccaccactcccacctattacctgcatcttccctgagcccacac
ccttcggtgcaccaccccttgcttcccaccgtgttgcctgccattccaccgacgtccctg
ctgggtggccaccctcgccttgactcaggtggactcagtcatctggctctagctcatcac
cactcacaccagcaacaacagtttttgcaacagcaaccacccccaccgctgctgccccag
acacatggtggagctggctacaaccagctgggcctataccccatcatttggcagtaccat
aatggcacacagcactcctatccacctggacttagcctgccagggtcaaagtgggtgcat
ccagaaaatgctgtgaactcagatgttagcctgccgaggaacacctccagcccctggctc
catcagcccacccctgtgagctcagcagacagccttgggattctgagccatgtcccaggt
agaccagccagtgccgacccccacaggccccttaaaatcacatcacactccagccctcca
ctctctaaaacatctgcagatcatcataaaggggagttggaaagtaaggtttttgtagat
cctatgcgtggcctggtaacagcccacctgaagcaggagccagaccgaagccggacaccc
aacagtatagagttgcagcgtctctacatggattcatctcacataaagcagcagacacag
cagcctccccgcctgccactggacaacccagaccgggccactaagtacaaggaggagaac
cgccgcattctacaggagagtatcgaggtggccccctttactgccaagatccggtcagga
gagctagagcgtgagccctatgctcgcattccctccctccccattagtggaccacccaag
gagaatgaacattcttcctctgatctttataagtacaagcactctgctgttcaatcactt
ccgcagagcaactatttcaccaccctgtccaacagtgtggtgaacgagccaccccgtctc
tatccttccaaagagctcaactccctttctgtttcaagtcccctgtctctgggctcctac
accagtagcagaggcagtgcaaagtccttgtccaagccccccccactcatcaagcaccag
ccagagagtgagggcctggtggggaagatcagcgagcagctcagtcagcaggtggccctg
aaccccctcagtaccacagcagcagccagtgaacgccacagtccagctgtctcaccctca
aaccaactcaggagcatgcctgctctgcacagggcacctgtctttcatccacccacccag
caaacactggaccgcaaggaggctggctgtggtcgcctctccccgcccaccctcaccccc
attcagccagtcagtgtggctgggaaggtatcagagcaacagaagccccccactctactg
ccagagctcagggaggtgaagagcagtgtagatctgggctccagtgagtcatggaggcct
gactcacagagccatgataaaacagctcagtggcactcagacaaaagtgaagggaagcca
caggcagccacagcctcggttattgttcgctctagaacctgcatcaagtacgacagctca
ccgggctccaagactggcaccaaggagacatctgtcagtaggccacatacaggcaaaaac
caactggactgcactaaactgactgagaccagagaacctggaagagttatccagcaaaac
acaaatagggaggatttttttttgcaatacaaaaagaactttgtccgagtctcccagggc
agctttcccagctctgcagtagctgttgttaactcgaagtgcaatagcagtaatgatgta
accacttctgcctctgctgcttccacgtacaatgcgctcagtcgaggcacaactgaactg
ccatatcccaccccagctgctcagagcagctgtaacattaacagactagatgcccctgta
cccaagtgcaggactccaaccggccctgagctacaggagtgcaatgccaggacatcctcc
cccagtggccagctgctgcagcctggtttgtccccagctccacagccctactctgggaac
ttcattcacctgaagaagcacaaggccgccttggctgctgcccagtcccgtggatcaagc
agtgcctcagagagtgaaggcagcagtcgatcctctcaggaatctcccaccatcatcaac
caggaccgtgcctcaccaggcaacccagccagcaaagcctgccccttacccaatggccag
tcatcacagatgaaccagcccaactaccacaagctgaagaaagcttggctcactcggcac
tcagaggaagatcgtaacacaaacaaggtggagaagatgcccgatgctgtctctgagatc
attaagccatgcacagtgaacctagtagcatccacctccagtgatgcagagataggcaaa
gatggcaaatgcctagaggataaaatgagcctggaggaaaggaaaccgcggcgaggtccc
tccaagcggccacatgactccggctcggacagcggtgatgactcagatggcagtgacagc
aagcaggagcagagagcaaagaggcagcctaagcccacctacaagaaaaaacagaatgac
atgcagaagaagaaaggggagaatgacaaggatgaggatgatatcaagcccaatggcatt
ttcagaagtgccaaggagaaaaccaaacttaaactggccagcagcaacggtattcctcgc
tcggtgctgaaagactggaggaaagtgaagaagctgaagcaaacgtgtgagtccttcctg
caggatgattcatgttcagagatcggccccaacctgcagaagtgccgcgagtgccgctct
atccgcaccaagaaaggagaagagcccacacactctcctgtcttctgccgcttctactat
ttccgccgcctttcatacagtaagaacggagttatccggatcgatggcttctcataccct
gaccagcacgatgaggaggctctgagtctctgggctccagatgcatgtgaagagaatgat
ctggacctggaaacctcgaaatatattctcagctacatcggagacaagttctgccagctg
gtcatgagtgagaagaccgcagccacgtggataaaaaaagacgccaagatagcctggaaa
cgggcggtgaggggggtgcgtgagagctgcgacgcatgcgaggccacattgttcaacatt
cactgggtgtgccagaaatgtggatttgtggtgtgcttggactgctacaaggcgaaggag
aagaagaactccaaagacaaagagctgtacacctggctgaagtgtgtcaagggacagcca
catgatcacaagcacttgatgccaacgcagattattccaggaacagtcttgacagacgtg
gtaaatgccatgcacatgctcagggagaagtttggcatcaaagggcactgcacctgtgcc
aacaagcagaacatcctcaacaagctcccatccactaacggcgtttctcaggtccttcag
aacgtgctgaatcacagcaacaagctttccctgtgcaagcccgaggctggccagcacaat
ttgggacagaaggtggaggcgaatgggggcagcagcccagcaagtgacaccagcactgat
agcaagctcacgccgcctgaatctcagtcaccactgcactttctggccgacttggccgag
cagaaatctcgggaagagaagaaagagaacaaggagtcagttgtagggaaggtgaaggaa
gagaacagtgatgctctggagactttgcactgtaaagcgtcatctctggtggccaacagc
acagagcaaggctccacactgcgggacctgctcaccaccacggccggaaaactgcgcttg
ggctccaccgatgccggcatcgccttcgccccggtctactccactgcttcacagactggg
aaaagtcgcactatgcctaacatcctggatgacatcattgcttcagtggtagagaacaag
atcccggcagaccgcagcaccaagcagagcccgaaggctaaaccccaggaagaggccaag
accgagaggaagagacaagccgaggacatgcccgagcagcacgcagacatcccccactgc
tggttgcatgatcgtagactgctctggctcaaagaccaccgcaacagcaacaactggaaa
ctgttccgagagtgctggaagcagggacagcctgtgcttgtctcaggggttcacaagaaa
ctcaacaccagcctgtggaaggctgaagctttcagccaggagttcgctgaccaccagggg
gatctgctgaattgcaaggacggcgtggtttccaactcaggcatcaaagagttctgggac
ggctttgatgacctgacaaaacggcccaaatccagagatggtgaggcaattgtgtacagg
ctaaaagactggccttcaggagaagagtttatggctctaatgccttccaggtatgatgat
ctgatgaagaaccttcctctgcctgaatattcagaccccgaggggaatttgaacttggcc
tcccatctcccctcgttctttgtgcgacccgacttaggccctcgtctctgctgcgcatat
ggcgttgcttcatctcaggagcaggactttggcacagccaacttgcacatggaagtgtcc
gacgtcgtcagcgtgctcgtttacgttggagtggccaaagggaacggcgtcctctctaaa
acaggagtgctgaagaggctggaggaagaggatcttgatgaccatgtgaagaagagatta
aaggattcgagcgagactcctggagccttatggcacgtctatgcgagcaaagacttggag
aaagtgaaagaatttctgcacaagatctctaaagagcagggtgtggagataccaccagag
cacgatccaatcagggagcccggctggtacctgagccgcaagcagaggcagcgtctgcag
gaggagcacagtatacagggcagcaccatcgtccagttcctaggagactcggtcctggtc
cctgctggagccctgcaccaggtgcagaacttgcacagctgcattcaggtgatcaatgac
tttgtctcgccggagcatgtggtgcactccttccacttaacccaggagctgcgctcctcc
aaagaggaaatcaactatgaagataagctacaggtcaagaacatcttttaccactgtgta
aaggatgctgtgggaacattaaagcggtgcagtgctgaggctcaggaggaagaggaggca
aactcatga
DBGET
integrated database retrieval system
