Tachysurus fulvidraco (yellow catfish): 113649397
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Entry
113649397 CDS
T08119
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00310
Lysine degradation
tfd00514
Other types of O-glycan biosynthesis
tfd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113649397 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
113649397 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tfd01003
]
113649397 (colgalt1b)
Enzymes [BR:
tfd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
113649397 (colgalt1b)
Glycosyltransferases [BR:
tfd01003
]
O-Glycan biosynthesis
O-linked Gal type
113649397 (colgalt1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
113649397
NCBI-ProteinID:
XP_047659172
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Position
18:complement(19174804..19188776)
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AA seq
591 aa
AA seq
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MLRGVLLLSGAAVLLALAPCWGSFPEERWNPESPLLAPRVLLALLCRNSERSLPHVLGTI
DRLHYPKDRIAVWVATDHNADNTASVLREWLIKVQTLYHYVEWRPQEEPSEYEDEVGPKQ
WTDLRYKHVMKLRQAALETARQMWADYFLLVDCDNLLTNPDVLWKLMKENKTIVAPMMKS
RTAYSNFWCGMTSQGYYRRTPDYMPIRSQERRGCFPVPMVHSTFLLDLRKQASSRLAFYP
PHPDYTWAFDDIIVFAFSARMADVQMFVCNRETYGYIPVPLHTHHSLRDEADNFLHTLLE
VMVHGSPVDPSGHLSVPHKHPDKLGFDEVFVINLLRRSDRRERMLRTLWEQEISCKVINA
VDGKALNDSQIRALGIRMLPSYSDPYHGRPLTRGELGCFLSHYNIWTEIVEQGLQRSLVL
EDDLRFELFFKRKLQKLMQDVEAEGLDWDLIYIGRKRMQVEHPEKPVPNIRNLVEADYSY
WTLGYMISLQGANKLLRAEPLTKMLPVDEFLPIMYNKHPVQDYMSHYEVRDLSAFSAEPL
LVYPTHYTGDPGYISDTETSTVWNNETVRTDWDRQRSEKNHAMHSHATSDL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggggcgtgctgctgctgtccggcgccgcggtgctgctcgcgctcgccccgtgt
tggggatctttcccggaggagcgctggaaccccgagtctcctctgctggcaccgcgcgtt
ctgctcgcgctgctgtgccgtaactcggagcggtcactcccgcatgttctcggcaccatc
gaccgcctgcactaccccaaggaccgcatagctgtatgggtggcgacggaccacaacgca
gacaacacggcttcggtccttcgcgagtggctcattaaagttcagactttatatcactat
gtggagtggagaccacaggaggaacccagcgagtatgaagacgaggtcggaccgaagcag
tggaccgatctacgttataagcacgtgatgaagctacggcaggcagcgctggaaaccgcc
aggcagatgtgggccgactactttctgttggtggactgtgataatcttctcactaaccct
gacgtcctttggaagctgatgaaggaaaacaaaactattgtggcaccaatgatgaagtcc
agaactgcgtactcaaacttctggtgcggaatgacctctcagggctactacaggcgtacc
ccagactacatgcccataaggagtcaggagaggcgtggctgtttccccgtccccatggtc
cactccaccttcctgctggacctgaggaaacaggcctccagccggctggccttctatcct
ccacaccccgactacacctgggccttcgacgacatcatagtgttcgccttctccgcccgc
atggcagatgttcagatgttcgtgtgtaacagagagacgtacggctacatccctgtcccg
ctgcatacccatcattccttgcgagacgaggctgataacttcctgcacacgctgctcgag
gtcatggtgcacggttctcctgtggatccctcaggacatctctctgtccctcacaaacac
cctgataaactgggctttgatgaggtgtttgtgattaacctgctgagacgttcagatcgt
agagagagaatgttaaggactctgtgggagcaggagatctcctgtaaggtcatcaacgca
gtggacggcaaagcactgaatgacagtcagatccgtgctttagggatcagaatgttaccc
agttacagtgatccgtatcatgggaggccgctcactagaggagaacttggctgcttcctg
tctcactacaacatctggactgagattgtagagcagggactgcagagatctctggttcta
gaagatgatttgcgctttgagcttttctttaaaaggaaactccagaaactgatgcaggac
gtggaagcagaaggactggactgggatttaatttacatcgggaggaagcggatgcaggtg
gaacatccagagaaaccggttcccaacatccggaacttagtggaggccgactattcctac
tggacgctgggctacatgatctcattacaaggagccaataagctgctgagggcggagcct
ctgaccaaaatgcttcctgtagatgagtttctgcccatcatgtacaacaagcacccagtg
caggactacatgtctcactatgaggtgagggatctgtcggcgttctctgctgagccgtta
ctcgtctaccccacgcactacacgggcgaccccgggtacatcagcgacacagagacgtct
accgtgtggaacaacgagaccgtccgcaccgactgggaccgacagcgttcggaaaagaac
catgccatgcactcgcatgctacctctgacctttga
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