Tachysurus fulvidraco (yellow catfish): 113649449
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Entry
113649449 CDS
T08119
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113649449 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tfd04091
]
113649449 (frem2b)
Lectins [BR:
tfd04091
]
C-Type lectins
Lecticans
113649449 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
TMEM154
DUF6522
Motif
Other DBs
NCBI-GeneID:
113649449
NCBI-ProteinID:
XP_047676624
LinkDB
All DBs
Position
11:complement(18842334..18995628)
Genome browser
AA seq
3112 aa
AA seq
DB search
MAQSKLDTTVCFFIISLFLLAWSLQEVSSVRGFDSQGLTYGHRSELTEDAILVANNGIRV
PFGRSVFIDPINDLVLQVRPGDKCIITVLDNDPLSQKPGQLSPKKFPCEFGPSDVKYSHF
GSRSPSKDRVRLQLRYDTQTDTVIIPFMMEVEVIFTQLEILIKNMPLTVDKLLGASNPVD
KKILEFTFDRNMYQCKVTSLARTGVLPRYGKLVDEGKLGKMFDCDEFLRLNIRYQHTFAQ
RSPNRDYIPMYVELQDKESNVMKQEFFQIMVRIKEGEENTPPKPSFISMMMMEVDQFVMT
AITPDMLAAEDIESPPDDLIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLKDLKIAYK
PPSEDSDAERIFQIEFVVVDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQTRP
LSSSQNLQISDEDNLHDVRVTVIDGLRHGELTVIGSRSKFFTVADLDHGSVIYQHDGSDT
YSDNIIFRMTDGRHEVEFLFPITVVPTDDEPPIINANTGLVMFKNQMIPISPLMLSAADI
DSEDSTIKFILEEPFSSIGEVLLRQQDAPEDPSTWKFNSEDEMYEKVVTEWVQQDITDGK
LFYRHAGPHNTKTIMDQFVFRVQDDNDPPNKSGQNSFVIKILPIDDIPPEPYPDTTQQLT
VHEYQLTFFRKKFLRYTDLDSEDRDLKYIITQPPRDTDENNPVILGAIVLTENPNVEVTE
FTQAQINHHKIAYKPPDQELGITPHVVQFHYTVEDTAGNSVDGEFTIFLQPVDNKPPQIT
NTGFTVLERGMHVITRTELDTTDPDTDNTMITFTLTQPPLHGQIQYIFTDLTKGDSFNLD
DVSQGRISYSHNGDEKSNDFFQLDVSDGVHVVTITIKINVKLIDDETPTISFPEGTIGSY
IDVLENGATEITSNVIQGRDEDTDDLRLTFIVEDPPVFGEILVNGVPANRFTQADIISGL
VIYAHTSGEIGLTTKEDFFNLTLTDMSDEWTVGGNRIKGVRVHVTILPIDSQAPQVFVGH
QFSVVEGEKNIIQIAHISASDIDTPNDDLLCTIIVQPTSGYLENISPAPGSEKSRSGMAI
SAFTIKDIKQNHIHYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPIVIIPSNDEKPEI
HMREFVVMEGMNVVIDTPILNGVDADFPSDELTFIVTKPPKHGFIINQLTTGTLPVTNFT
LDQIREASSIVYEHDDSETTEDSFKVLLTDGKFTVEKIVLIMVIPVDDETPRMAINDGLE
IEIGEIKDITNKVLKATDLDTKDSTLTYVIRYGPNQGILQKRTQFGTLQNITIGMNFTQN
DIDENWIIYVHNGQEGVRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVISKGVSLKE
GGRVTLTTDLLSTSDLNSPDEHLVFTITRAPVRGHLECTDTPGMPISSFSQLQLAGNKIY
YIHTSDDEIKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVVTIHGLVVNEGKSKLITP
FELTVEDRDTVDQLLKFTITQPPIHGKLLFNNTRSITSFTKQDLNENRISYKHDGTESTI
DSFSFTVTDGTHSDFYVFPDTVFETRKPQVMRITVLSVDNGVPQIVVNKGGTALKMLPGG
HLGFVITSKALKAEDRDSPHGAVTFRVTVGAEHGYLIDLGKGNVTITTFTQADIDDMHLC
YVLQNGDNATSDIFHFSIEDNGGNKLKNQQFRLTWAWISLEKEYYMVDEEVKFMEVVLRR
RGYLGETSFVSIGTKDGTAEKDKDFRGKAQKQVQFNPGQTTATWKVRILDDHLYEQTETF
QIVLSEPVMGALEFPQTATVEIIDPEDESTVFIPSATYSVEEDVGEFLIPVRRSGDVSQE
LMVICFTQQGTATGTVPTTVLSYSDYISRSEEHISVLRFDRDEIEKACRVVVIDDSLYEP
EETFNVTLSMPMGGRLSQKFPTTRITILPDSDDAPVFYFGDMEYHVDESDGYVEVRVWRT
GSDLSKMGTVTVRSRKTDPVSAEAGEDYVGISKNLDFAPGISMQTVRITILDDLGQPVLE
GPEKFELVLRMPMNGILGEPSKATVFINDSVSDLPKVQFRDATYTGNENDGKITAIIYRS
GDLRYRSSVRCYSRQGSAQVMMDFNERPNTDASVITFLPGEVEKPCTLVLVDDTEHEEVE
ELRLVLGSPKSESPFGASIGARNETLVKIKDDADKAIIRFGLTKFSVSEPSESGQVSVVK
VPVLRVGDTSKVSVVRVHTKDGSATSGADYHPISQDIEFKEGETQHTVEVEILYDGVREM
REAFMVHLKPDENMVAEIQMTKAIIYIEEGNSMADVTFPSVPVVMSLLHYDNPIGAPVSR
PPAGYPVLCVTACNPKYPNFERTGFICASEHINNTLTRYRWLVSAPAGPDGVTTPMREVD
FETFFTSSKRITLDSVYFQAGSRVQCAARAVNSNGEEGLEFSSSIVSVSVEEGLCQPRVI
GAVGAEPFSAKLRYTGPDDRHHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSPDGTR
VGNHRCSNLLDYSEVRTRHGFITSDIRSPDAIGSTAPYQYSTTLRGENTLRFYRNLHLEA
CLWEFISYYDMSELLSDCGGSIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGAGGWQHF
DLQSELRLTFVYDTAILWRDGIGSPPEAELQGSLYPTSMRINEHGRLVVNFRTEARFRGL
FVTSHAASPLTSMIMCMDHPGLTFNLSLVRSEPTYNQPMQQWTFVSDFAVRDYSGTYTVK
LLPCTASPSLEYTLPPVCNPREPVAFDLDIRFQQVSDPVAAEFSLNTQMLLLSKKTLWLS
DGSMGFGQESDTAFSEGDIVYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYNPDN
YEYGCLADAASLLYRFKIIDKAQPETQARAFGSVSFNAFLAVDDPEALTLVRQPGSDGFR
LDSAPLFQVAAGREWYIHTIYTVRSRNNANRGIGKRSVEYHHVTQHHSSRSRRSVSSVPA
LAEEIGEENERGTNILHVALERSTQHQLRPKVNIQSVVVTTGSKPQDIEDNDMIMIVGIL
VGLILTVVLLVLVFLVVRSRNEKEKINEPPKVSSSTEPMMTHSFDNNDSSEV
NT seq
9339 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaactagataccactgtatgtttttttattatttctctgttcctgttg
gcatggagtttgcaggaggtttccagcgtgcgcggatttgacagccagggactgacctac
ggtcacaggtccgagctcacggaggacgcgatactggtggccaacaacgggatccgggtt
cctttcggcagatccgtgttcatcgacccgattaatgatttagtcttgcaggtccgacct
ggagacaagtgcatcatcacagtcctggacaatgatcctttatcacagaaaccgggtcag
ctgagcccgaaaaagttcccatgcgagttcggacccagtgatgtgaaatactctcacttc
ggatcccggagtccatctaaagacagagtcagactccagttaaggtatgacacacagact
gataccgtcatcatcccattcatgatggaggttgaagtgatctttactcagctggaaatc
ctgatcaaaaacatgcccctaactgttgacaagcttctaggagcaagtaaccctgttgat
aagaagatcctggagttcacttttgaccgaaacatgtaccaatgcaaagtgacttcactt
gccagaacaggggttttgcccaggtatggaaagcttgttgatgaaggtaaattaggtaaa
atgtttgactgtgatgaatttctcaggctgaatattcgctatcagcatactttcgctcag
cgctctccaaacagagattacatccccatgtatgtagagctacaggacaaggagagtaat
gtcatgaaacaggagttttttcaaattatggtgcggatcaaagaaggcgaggaaaacaca
ccgcctaaacctagcttcatctccatgatgatgatggaagtggatcagtttgtgatgacc
gctataacccccgacatgctcgctgcggaggacatcgaatctccacctgatgacttgata
tttaacattacctctcctctgtcattcgaggaaggctatattgttagtacagatgatagg
aatttgcccattacatccttctatcagggagatctgaaggatcttaaaatagcatacaag
cctccgtctgaggactcagatgctgagagaattttccaaattgagtttgtggttgtagat
acagagggagctgtttcagatcctttcgcttttatgatcgttgttaagcctatgaacact
ctggctcccgtggtgactcgaaacacagggcagctgctctatgagggacagactaggcca
ctgtctagctcacaaaacctgcagataagcgatgaggacaatttacatgatgtcagagtg
acagtgattgatggactgaggcacggtgagctcactgtgatcggctccaggagtaaattc
ttcaccgtggcagatctggatcatggatctgtcatctaccagcatgacggcagtgatacc
tatagcgacaatatcattttccgcatgacagacggcagacacgaagtggaattccttttc
cctataaccgtagtgccgactgatgacgaaccgccgattatcaacgccaacaccggtttg
gtgatgttcaaaaatcagatgatacccatttctcctttaatgctcagtgcagccgatatt
gactctgaggattcgactattaaatttattctggaggagccattctcaagtataggagag
gtgcttcttcgtcagcaggatgctccagaagacccatccacttggaagtttaattctgag
gatgaaatgtatgagaaagtagtgacagagtgggtccagcaagacattactgatggaaag
ctgttttacagacacgctggcccacataacactaaaaccatcatggatcagttcgttttc
cgagtacaggatgacaacgacccgccaaataagtctggacagaactctttcgttatcaaa
attctccccatcgatgacatccctcctgagccttacccagacactacacagcagctcacg
gtacatgaataccagctcactttcttccgcaagaaattcttacgttacactgatttagat
tccgaggacagggatttgaaatatatcatcactcagcctcccagagacacggatgagaac
aaccctgttattttaggagccattgttctgacagaaaacccaaacgtagaggttacagag
ttcacccaagcgcagataaatcaccataaaatagcatacaagccaccagatcaggaactg
ggtataactccgcatgtagtgcagttccattacacggttgaggacacagcaggaaacagc
gtcgatggagagttcactattttcctgcagcctgttgacaacaaaccaccccagattact
aacacagggttcacggtgttggagcgaggcatgcatgtaatcacccgcaccgagctcgac
accaccgacccagacacggacaacacgatgatcacctttacgctcactcaacctcctctg
catggccagatccagtacatatttaccgacctgaccaaaggggattcgttcaatctggat
gatgtttctcaaggcaggatctcctactctcacaacggagatgagaagtcaaacgatttc
ttccagctcgacgtgagcgacggtgtccacgttgtaactattaccattaagataaatgtg
aagctcattgacgatgaaactccaactataagctttccggaaggtaccatcggctcctat
atcgatgtcttagagaacggtgctacagaaattacatctaatgtcattcagggacgagat
gaagacactgatgacctgaggttgacctttatagtagaggatccaccggtgtttggtgaa
atattggtcaatggcgtaccagccaacagatttacccaagccgacatcatcagtggatta
gttatttatgcacacacgagtggggagattggcctgacaacaaaagaggacttctttaat
ctgaccctgacggatatgtccgacgagtggaccgtcggcggtaatagaataaaaggcgtc
cgagtacatgtgactatcctgccaatagacagtcaggctcctcaggtgttcgtcggtcac
cagttcagtgttgtcgaaggtgagaaaaacatcattcaaatagcccatattagcgcttct
gatatcgacactcccaacgatgacctgttgtgtactattattgttcagcctacatctggc
tacttggaaaacatctcccctgctccagggtcagagaaatccaggtcgggaatggctatc
agcgcattcaccattaaagacatcaagcaaaatcatattcattacgtgcaaagcattcat
aaaggagtggaacctgtggaggacagattcactttcaggtgctcagatggcatcaatttt
tctgagagacacttctttccgatcgtaattatcccgtctaatgatgaaaagccagaaatc
catatgcgagagtttgtggtgatggaaggcatgaatgttgtaattgacactccaatactg
aatggtgtcgatgcagattttccctcagacgagctgacgtttatcgttactaaacctcca
aaacatggtttcattataaaccagttgaccactggtactcttcctgtgactaactttact
ctagaccaaataagagaggcttccagtattgtttatgagcacgatgattcagaaaccaca
gaggacagttttaaagtgcttctcactgatggcaagtttacagtggaaaagattgttcta
attatggttatcccagtggatgacgaaacaccaagaatggctatcaatgatggcctagaa
atagaaataggagagatcaaagatatcaccaacaaagttttgaaagccactgatctggat
acaaaggacagcacgctgacttatgtcatccgatacggccccaatcagggaattctgcaa
aaaaggacacagtttggaacgctccaaaacataaccattggaatgaatttcactcagaat
gacattgatgaaaattggattatatatgttcataacggacaagaaggagtacgtgacctc
atcaaatttgatgtcacggatggcatcaatccattgattgacaggtatttctatgtaacg
gtcggtggaatagatatggtgttccctgatgttattagcaaaggcgtttctcttaaagaa
ggaggtagagtgacgctaaccacagacttgctcagcactagtgatctcaacagcccggat
gagcacttggtcttcaccatcacccgagctcccgtgagaggtcacctggagtgcactgat
acaccaggcatgcccatcagctccttcagccagctccagctcgctggaaacaagatctac
tacatccacacgtctgatgacgagataaagatggacagctttgagtttgaagtgacggac
ggttataacccagtgttccgtactttccgcgtttccataacggacgtggacaacaagaaa
cctgtggtcacgattcacgggttggttgttaacgaagggaagagcaagctgattacacca
tttgaattgaccgtggaggatcgtgacacggtcgaccaactcctaaaattcaccatcacc
cagccgcccattcatggaaagctgctgtttaacaacacccgaagcatcacgtccttcacc
aagcaggatctcaacgagaacaggattagctacaagcacgacgggaccgagtctactatc
gacagcttttccttcaccgtcacagatggaactcattcagacttttatgtctttcctgat
acggttttcgagactcgcaaaccccaggtgatgagaatcacagttctttctgtggacaac
ggtgttccacagattgttgtcaacaagggtgggacggctttgaaaatgctgcccggtggt
catctaggatttgtgatcaccagtaaagcgctgaaggctgaggacagagatagtccacat
ggagctgtaacatttagagttacagtcggtgcagaacatggctaccttatcgacctgggc
aagggaaatgtcaccattaccacatttactcaagctgacattgatgacatgcacttatgc
tacgttcttcaaaatggagacaacgcgaccagtgacatcttccatttctccattgaagac
aacggaggaaacaagctgaaaaaccagcagttcaggctgacctgggcttggatctctctg
gagaaagagtattacatggtggatgaggaggtcaagttcatggaggtggtcttgagacgg
aggggttacctcggcgagacctcgtttgtcagtattggaactaaagatggcacagcagag
aaagacaaagattttcgtggcaaagcccagaaacaggtccagttcaacccaggccaaacc
actgccacctggaaggtccggatcctcgatgaccacctgtacgagcagacagaaaccttc
cagattgttctgtctgagcctgtgatgggtgcgctcgagttcccccagacagctacagtg
gagataatcgaccctgaagacgagtccacggtgttcatcccttcagctacgtactcagtt
gaggaagacgtcggagagttcctgattcccgttcgccggtctggagatgtgagtcaggag
ctgatggtcatctgttttactcagcaaggcacggccactggcaccgtccccactacagtg
ctgtcctattcggactatatctcacgttcagaagaacatatcagtgttctacgcttcgac
cgagatgaaatagagaaggcatgccgtgtggtggtgatcgacgactcgctgtatgagcct
gaggaaacctttaacgtcaccctcagcatgcccatggggggtcgcctcagccagaaattt
cccaccaccaggatcaccatcctgcccgactctgatgacgcacccgtgttttattttgga
gacatggagtaccatgtggacgagagcgatggctacgtggaggttcgggtttggagaaca
ggatctgacctgtccaagatgggaacagttacagtgcgctcacggaaaaccgacccggtt
tcagctgaagctggtgaggattatgtaggaatcagtaagaacctggactttgcaccaggc
atcagcatgcagacggtccgcatcaccattctagatgacctgggtcagcccgtgctggag
ggacccgagaagttcgagctcgtcctccgcatgcccatgaacggcattctgggagagccg
agcaaagccaccgtgttcatcaacgactcggtttcagatttgccaaaggtacagttccga
gacgctacatacacaggtaacgagaacgacggaaagattacggctatcatttaccgcagt
ggagatctgagatacaggtccagcgtgcgctgctacagccgtcagggttctgctcaggtc
atgatggacttcaacgagagacccaacacggacgcttcagttatcacgttcctaccaggg
gaagtggagaaaccttgtactctcgttctggtcgatgacacggagcacgaagaggtggag
gagctcaggttggtcctggggagccctaaaagcgagtctccattcggggcgtctatagga
gctcgaaatgagacactggtcaagattaaggatgatgctgacaaggccatcatcaggttt
gggctaaccaagttcagcgtgagtgaacccagtgaatccgggcaagtgtctgtggtgaag
gtgccagtgctgcgagtcggagacacatccaaagtgtcggtggtgagagtgcacactaag
gacggctcggcgacatccggggcggattatcacccaatatcgcaggatattgaattcaag
gaaggagaaactcaacacacagtggaagtcgagatcctgtacgacggcgtgcgtgaaatg
agggaagcgttcatggtccacctgaaacccgatgagaacatggtggctgagattcagatg
accaaagctatcatctacatcgaggagggaaacagtatggcagatgtgacgttcccctct
gtgccagtagtcatgtcattgctgcattacgataacccgatcggtgccccagtgagtcga
ccgcccgctggctacccagtcctctgtgtcacagcttgcaatcccaagtaccccaacttc
gagcgcaccggcttcatctgtgcaagcgaacacatcaacaacacgctgacccgttaccgc
tggcttgttagcgcccccgcagggcccgatggtgtaaccacccctatgagggaagtggac
tttgagacctttttcacctcgtcgaaacgcatcacgctggactctgtgtatttccaggca
ggatcacgtgttcagtgcgcagccagggcggtgaactctaacggagaggaggggctggag
tttagcagctccatcgtctccgtcagtgtggaggagggtctgtgccaacctcgtgtcata
ggcgctgtaggagctgagcctttctcagctaaactccgctacaccgggccagacgaccga
catcatcccaacctcatcaaactcaccgtcaccatgccgcacatagacgggatgctcccc
gtggtctccactcgtcctctctccaacttcgagctgacgctcagtcctgatggaacccgg
gtgggaaatcatcgctgctccaacctgttggactacagcgaagtccgtacgcgtcacggt
ttcatcacctcggacatccgtagccccgacgccatcggcagcacggcgccttatcagtac
agcactactttaagaggagagaacacgctacgcttctaccgcaaccttcacctggaggcc
tgtctctgggagttcatcagttattacgacatgtccgagctgcttagtgactgcggaggg
tcgattgggacagacgggcaggtgctgaaccttgtgcagtcgtatgtgacactgcgtgtg
ccgctctacgtgtcctacgtgttccactctccggtgggtgctggaggctggcagcacttt
gacctgcagtccgagctcaggcttaccttcgtctacgatacggccatcctgtggagagac
ggaatcggcagcccgcctgaggccgagcttcaaggctcgctctatcccaccagcatgcga
attaacgaacacggtcgcttggtggttaacttccgcacagaagctcgcttcaggggtctg
ttcgtgacgtcgcacgccgcatcgcctctgacctcaatgattatgtgcatggatcacccc
gggctgacctttaacctcagcctggtgaggagcgagcccacctacaaccagcccatgcag
caatggacattcgtctccgactttgcagtgagagattattccggtacctacacggtgaag
ctgttgccatgtactgcctctccgagcctggagtacacactgcctccggtgtgcaatccc
cgagagcctgtcgcatttgacctcgacatccgcttccagcaggtgagtgaccctgtagct
gcagagttcagcttgaacacacagatgctgttactctcaaagaagactctgtggttgtct
gacggctccatgggatttgggcaggagagcgacactgcgttctctgagggtgacatagtc
tacggccgtgttatggtggatcctgtgcagaacctcggagactcctttatctgcaacatc
gagaaggtgttcctgtgtacgggggcagatggctatgtgccaaagtacaaccctgacaac
tacgagtatggctgtttagcagatgctgcatcacttctctacaggttcaagatcattgac
aaagctcagccagagactcaggctagagcatttgggagtgttagctttaacgctttcctg
gcagttgatgacccggaagctttgacactagtgaggcagcccggttcagacggctttagg
ttggactctgcaccactgtttcaggtagctgcaggcagggagtggtacatccacaccata
tacactgtccgctccagaaacaacgcaaaccgaggcatcggaaaaaggagtgtggagtac
catcacgtcacgcagcaccactcctcacgttccagaaggtctgtcagcagcgttccggct
ttggctgaggagatcggggaggagaacgagcgaggaaccaacatcctgcacgtggctctg
gagcgcagcacccagcaccagctacgacccaaagtcaacatccagagcgtagttgttacc
acagggtccaagccacaagacatcgaggacaacgacatgataatgatcgtagggatttta
gtcggtctcatcttgactgttgttttgctcgtgcttgtgtttttagtggtgcgttccagg
aacgagaaggagaaaatcaacgagcctccgaaggtctccagcagcacagagcccatgatg
acgcacagctttgacaataacgacagctcagaggtgtga
DBGET
integrated database retrieval system
