Tachysurus fulvidraco (yellow catfish): 113649519
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Entry
113649519 CDS
T08119
Symbol
nsmce1
Name
(RefSeq) non-structural maintenance of chromosomes element 1 homolog
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113649519 (nsmce1)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113649519 (nsmce1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113649519 (nsmce1)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Atypical E3
113649519 (nsmce1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
113649519 (nsmce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
DUF5457
SLX1_C
zf-RING_2
FANCL_C
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
113649519
NCBI-ProteinID:
XP_027013142
LinkDB
All DBs
Position
24:16107162..16112136
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AA seq
268 aa
AA seq
DB search
MSRPMGDSHKRFLQTMMRNGIISSVQAKALYRHCCETHGAHYLPDKLEEFIDVINTNLQP
MFMHVRKGTSEEDGAQHYALVNVAETDITRMSSDYADNELELFRKTMDLILDAENGSASS
TDLLNCADRLQTKKMKKKETEQVLNKFVQDKWLSEKQGEYTLSTRCIIEMEQYMRTVYQD
LIRVCHVCHNIVLQGQICENPDCGIKMHYYCVARYFKGRIDPHCPSCSAFWAHEVPEIQP
ESQSQSSSARETSAPTPSTVATRRSRRL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcctatgggtgacagccataagcggtttttacagaccatgatgaggaacggt
ataatcagtagtgttcaagccaaggcactttatcgccattgttgtgagactcacggagct
cattatttgccagataagttggaggaattcatcgacgtcatcaatactaaccttcagccc
atgttcatgcacgttagaaaaggcacgtcagaagaggacggagcacagcactacgctttg
gtgaacgtggccgaaacagacatcacgagaatgtcttctgattacgcggataacgaactg
gagctgttcaggaaaacgatggatctgattttagacgccgagaacggtagcgcctcttcc
accgatctcctgaattgcgccgatcgtctccagacgaagaaaatgaaaaagaaagagacg
gagcaagtgctgaataagtttgttcaggacaaatggttaagtgagaaacaaggagaatac
actttaagcactcgttgtatcatcgagatggagcagtatatgcgtacagtttaccaggac
ctcatcagggtgtgtcacgtgtgccacaacatcgtcttacagggccaaatctgtgaaaac
cctgattgtgggatcaagatgcattattactgcgttgccagatattttaaagggcgcatc
gacccacactgcccttcctgcagtgccttctgggctcatgaggtccccgaaatccagccg
gagtcacaaagccagtcttcgtctgccagagagacgtctgctcctacaccgtctacggtt
gccacacgacgctccaggaggctgtga
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