Tachysurus fulvidraco (yellow catfish): 113649721
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Entry
113649721 CDS
T08119
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03030
DNA replication
tfd03410
Base excision repair
tfd03420
Nucleotide excision repair
tfd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113649721 (rfc2)
03410 Base excision repair
113649721 (rfc2)
03420 Nucleotide excision repair
113649721 (rfc2)
03430 Mismatch repair
113649721 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113649721 (rfc2)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113649721 (rfc2)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113649721 (rfc2)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113649721 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
113649721 (rfc2)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113649721 (rfc2)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113649721 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
113649721 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
nSTAND_NTPase5
RCF1-5-like_lid
AAA_14
Mg_chelatase
AAA_16
AAA_11
Viral_helicase1
Rad17
RuvB_N
AAA_assoc_2
AAA_24
MipZ
AAA_19
nSTAND3
AAA_18
ABC_tran
AAA_28
AAA_5
DNAX_ATPase_lid
AAA_25
SLFN-g3_helicase
MeaB
AAA_30
AMP-binding_C_3
AAA_23
RNA_helicase
MCM
NTPase_1
DUF815
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
113649721
NCBI-ProteinID:
XP_027013451
LinkDB
All DBs
Position
21:7349515..7355259
Genome browser
AA seq
353 aa
AA seq
DB search
MEVEMKEADGEQSQSDAQSNKKGDATKSSTTTYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKARHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDEQIMMRLMEVVEKENLHTTNDGLEAIIFTAQGDMRQALNNLQSTHS
GFGFINSENVFKVCDEPHPLLVKNMLEHCVTGNIDEAYKIISQLWSLGYSPEDIIGNIFR
VCKTLQMPEYLKLEFIKEIGYTHMKITEGVNSLLQLAGLLGRLCSKTAAPEAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagatgaaagaagctgatggcgaacaaagtcagtcagacgcacagagtaat
aaaaaaggagatgcaaccaagtcttcaacgaccacatacgaactcccctgggtggaaaaa
tacagaccgctgaagctgaacgaaatagttgggaatgaagaaactgtcagcagactggag
gtgtttgccagagagggaaatgtacccaacatcattattgccggtcctcctggcactgga
aaaacaacaagcattttgtgtttggccagagctcttctaggcccggcgatgaaggacgct
gtgctcgagctaaatgcttcaaatgatcgaggtattgatgttgtccgaaacaagatcaag
atgtttgctcagcaaaaagttactctccccaaagcacgtcacaaaatcatcatcctggat
gaagccgacagcatgactgatggagcacagcaagctctgaggagaacaatggagatctat
tcaaaaaccaccagatttgctttagcctgcaatgcatcagataaaattatagagccaatt
cagtcacgttgtgcagtgctgcgctacagtaagctgagggacgaacagatcatgatgcgg
ctgatggaggtggtagagaaggagaacctgcacaccaccaacgatggactggaggccatt
atcttcaccgcccaaggagacatgagacaggcactaaacaacctgcagtccacacattct
ggatttggttttatcaacagtgaaaatgtgtttaaggtatgtgatgaaccacacccccta
ctggttaaaaacatgcttgaacactgtgtcaccggcaacatcgatgaggcttacaagata
atatcacagctttggtcactcggctactctcctgaagatataatagggaacatcttcaga
gtgtgtaagacgttacaaatgccggagtacctgaaactggagtttatcaaggagattggc
tatacccacatgaagataacagaaggagtgaactctctgctccagcttgctggactgtta
ggacgtctctgcagtaagactgcagcccccgaggccagctaa
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