Tachysurus fulvidraco (yellow catfish): 113649776
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Entry
113649776 CDS
T08119
Name
(RefSeq) uncharacterized protein LOC113649776 isoform X4
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113649776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113649776
Membrane trafficking [BR:
tfd04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113649776
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
113649776
NCBI-ProteinID:
XP_027013533
LinkDB
All DBs
Position
3:complement(2390601..2526324)
Genome browser
AA seq
2198 aa
AA seq
DB search
MLSVMCFLRAFFTVQEALGTPNDPGGAEQTKCEPDLYPQGWREQESDSSHKPWNNEDEFS
ALLEVDHLYPGLSLENGPEETDYNVQAGLKNTHCRGQEIQHINTLNTEKEEPNGHLIDTH
CGELTQERSLSLSINGLDTQVVQGTGELNTQHVHTHNLKHTTTKNTEEPKTQDAKNTDVT
RTDCVETNNEERTGLQNTEKTDDSIAGERRKDTSEPQSGRCSPSTKETYINVRSRLQTTD
PFSLNGSGKNDVEIKGICSAELNKNILSNIDKHLDRLHNTNKPEIHSSDSREVAIDDTGA
LSCSDLHHKNDNNPDALCPERFIDTACTTCFQQRQTIRSGCVAIKHESLLSQDDTCNEKS
SVYNADELDPLSRSEVKQIHCNEYTLHTRTHESGSTNTTGVKENALNTSEDCNDALIVFR
DRNITQKSPYETKESCTTHLNTCDGDTKTHDTLSVSGVHLLQLGTESVKSPGSGLRRSFN
GKVLPACSDETAAEILVHTGAERQLQKNPQQQDSESKFPPCSTDCQDFDRIFWLNSQVTG
TENKSTLTHTGGVKQSVSREDRRNRFEERVLEDSSFPLTLLPLSTSLERHQIHNECKDIN
SHSPELLISTSRSCDRSHYSLSTEEKVKNQSQKLTRSEEVEDNPYSKHGQRIDDTLHLPF
HSTKSSQSAIWTENCILSNPVETQAPIFTVCQPRHTHEQCVNVLNNHTLFVDLKHKRSIS
SSQGNVIEIPFPETSPVKTVEKDNPKSDQIEPYWNLHVYNNTASEKSSDAKEAVGVCNPL
LVPFSDGPESDTEDSESQTTFLALTSDQKEDGLVTLDRLKKPSDVRFPVDWSSEDSAVSG
LGEDFESIDCDFCTGQEKDSKQQIQKEYLEKDKHFECNIVSTDDELHHYQKCPVDSQPIL
SVLNGRSPFKHSGHINHTHKHTSLSGYIQETDLDSFGSEPNRPEDPETRNPLKQDKQIEL
SSSTQLKFHNSIRSCAEKEDSLLLTSGLKTIRYTQSEVLLPSRSLEPIPETECTLGNSPN
PNDVTFLGDKTTETEKFGNEKMKPSASDQDILGVDSCEHSLSLCKGKSEDRPCSASSDLI
EDKSLQNDEDTSINCPSTGSLELDTSSINSEDQEEQRSPLAGPIVKSQHSKSKVKPSKFS
VFSKMPSFRRGKSIARDGGVSKGEISPRDLQDRGEDLLSHLTQDAGRDQESQLDNSDDEV
FYKSEVVNKQTELQVDTEEEEEEDDVFGHGTGDMEGLEMPQLKQSTDSECSSYRRSKSTE
GLSFRLRFAQAHKSLSSFFEYRSMDKYNECPESEDTRTKLSWKKQKRVKEVDLLRRTLSV
PDTEKDGTKVMQRHTDPLSKRGVLRDGVGTSLKDSKSNGRSRRCLSITFIDSSEALTSGD
SGPVSPMAPLASQHLSCCSKMPSGNSENPELPIRPMSPKPSSPRAAGQKQRFRYPSSRAN
TLSLIILGQSVGVSEPPERPRSLKPKVGRQGSLSPLGTGNHLEDGSIDSPSPISIITSMT
DNEFEPSVSLTVSPGSPSLFRNSTVMKTVKSPPAGSSGMRTRSRSSIGTTLPMQGGLQTH
CFRDDLWIEDEKKRQRRLTRGTAKRGAHHLEEIEEVRTRLSLCALKVFPGMPLRSLSFSH
STPTGLDCLSWRRRMSSPAVILPDGAPEKLGVGDEAGSEEDIYEELRNSGHRFPHPGGAG
EQLAINELISDGSVVYAEALWDHVTMDDQELGFKAGDVIEVMDATNKEWWWGRILDSEGW
FPASFVRLRVNQDEPMEDYLAQLEEAQEEQSSGVGLLLGPGLPCKEQMRTNVINEIMSTE
RDYIKHLKDICEGYIKQCRKRMDMFTEEQLCTIFGNIEDIYRFQKKFLKCLEKRFNKEEP
HLSEIGSCFLEHQTDFQIYSEYCNNHPNACVQLSKLMKLNKYVFFFEACRLLQKMIDISL
DGFLLTPVQKICKYPLQLAELLKYTNPQHRDYKDVEAALNGMKNVARLINERKRRLENVD
KIAQWQSAIEDWEGEDILSRSSDLIYSGELTKISPPHAKSQQRMFFLFNHQMVYCKKVQD
LLRRDILYYKGRMDMDQMEVLDVEDGKDRELNVSVKNAVKLRSLSGDEVHLLYAKKPEQK
QRWLRAFRDEREQVQHDRETGFSITEVQKKQAMLNACKSHPAGKPKAVTRPYYDFLLRQK
HPTLPTSLPQQQVFMLAEPKRKSSNFWHNIGRLTPFKK
NT seq
6597 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtgtcatgtgtttcctcagagcgttcttcacggtccaggaagctcttgggacc
ccgaacgacccgggtggagcagaacagaccaagtgtgagcctgatttatacccacaagga
tggagagagcaggaatcagacagttcacataaaccgtggaataacgaggacgagttttcg
gctctgttggaggtggatcatctttacccaggattgagtttagaaaacggacctgaggag
acagactataacgtgcaagcaggattgaaaaacacacactgcagagggcaggaaatacaa
cacatcaacacacttaacacagagaaagaagaaccgaacggtcatctcattgacacacac
tgtggagagctaacacaggaaagatcactatcactatcaattaacggtctcgacacacaa
gtcgttcaaggcacaggagaactgaacacacaacatgtacacacacacaatctaaaacac
accacaacaaaaaacacagaggaaccgaaaacacaagacgctaaaaatacagatgttaca
cgcacagactgcgtagagacaaacaatgaagaaaggacaggtttacaaaacacagagaaa
acagatgatagtatagcaggggaaagaagaaaggacaccagtgaacctcagtctgggaga
tgcagcccttcaacaaaagaaacatatattaatgtcagaagtcgcttacagacgacagat
ccgtttagcttaaacggttctggcaagaacgacgtagaaatcaagggcatatgtagcgca
gagctaaacaaaaatatcctcagtaacatagacaaacatcttgatagattacacaataca
aataaaccagaaatacactcgtctgacagcagagaggtagccatcgatgatacgggtgca
ctgagctgctccgacctccatcataaaaatgacaacaatccagatgcactatgtccagaa
agatttatagacacagcatgcacaacatgcttccagcaaagacaaactatcaggtcaggg
tgtgtagctatcaaacacgagtcattactgtctcaggatgacacatgcaatgaaaagtca
agcgtctacaatgctgatgaacttgacccgctgagcagaagtgaagtgaagcagatacat
tgcaatgaatacactttgcacacacggacacacgagagtggcagcacaaacaccacaggt
gtcaaagaaaatgcactgaacacttccgaggactgcaacgacgcgctgattgtttttaga
gaccgtaacattacacagaaatcaccatatgaaactaaggaatcctgcacaacacacctt
aacacgtgtgatggtgacacaaagactcatgacactctgagtgtatcaggtgtccactta
ctgcagctaggaactgaatctgtgaaatctccagggtcgggactccgtcggtcctttaac
ggtaaagtgttgcctgcttgttctgatgagacagctgcagagattttagtgcacactgga
gcagagaggcaactacaaaaaaaccctcagcagcaggactcagagtccaagtttccgcca
tgctccacagactgtcaggattttgatagaatcttctggctaaactcacaagtcactgga
acagagaacaagtccacactgacccatacagggggggttaaacagtcagtgtccagggag
gacagaagaaacagatttgaggagagggttttggaggattcttcctttccacttacccta
ttaccattatcaacatctctggaaagacaccaaatacataatgagtgcaaggatattaac
tcgcacagcccagagcttttgatatccaccagtcgttcttgtgacagatcacattactcc
ctttccacagaggagaaagtaaagaatcaaagccagaaactgacaaggtctgaggaagtg
gaggataatccatattcaaaacatggacagagaatagacgacacgcttcatcttccattc
cattcaaccaagtcaagccaatctgccatttggactgagaactgtatcttatcaaatcct
gttgaaacacaggctccaatatttactgtttgtcagccaaggcacacacatgagcagtgt
gtcaatgtcctgaataatcacacactgtttgttgatttaaaacataagagaagcatatct
tcttcccaagggaatgtcattgagatcccgtttccagaaactagcccggttaagactgtt
gaaaaggacaatcctaaatcagatcagattgagccttattggaacctccatgtatacaat
aacacagcctcagaaaagtcatcagacgccaaagaagctgtaggggtctgtaatcctttg
ttggtacctttttctgatggtccagaaagtgataccgaggatagcgaaagtcaaaccact
ttcctcgctctgacctccgaccagaaggaggatggcttggtcaccttagatcgtctaaag
aaaccctcagacgttcggtttcctgtagactggagcagtgaggattctgccgtttctggt
ctaggtgaagatttcgagagcattgactgtgatttctgtacagggcaggagaaggactca
aagcaacaaatacaaaaagagtaccttgaaaaggataaacattttgagtgtaatattgta
agcacagatgatgaactacaccattaccaaaagtgtcctgtagattcacaaccgatcctg
tcagttcttaatggacgtagtccttttaaacattctggacatattaaccacacacataaa
cacacttccctctctggctacatacaagagaccgatttagactcgttcggctctgagcca
aatcggcctgaagatccggagacacggaatcctctcaagcaggacaaacaaatagagctc
tctagctcaactcagctcaaattccataacagtatcaggagctgtgctgaaaaagaggac
agtttactactaacttctggattaaagacaatacgctacacccaatctgaggtcctgctc
ccgtcccgaagcctggagcctatcccggagaccgagtgtaccctgggtaactcccctaat
cctaatgacgttacctttctaggtgacaagacaacagagactgagaagtttggaaatgaa
aaaatgaaaccatcagcatcagaccaagacattctaggggtcgattcctgtgagcacagt
ttatcactatgcaaagggaagtctgaggaccggccatgctctgcttcatcagacctgatc
gaggataagtccctgcagaatgatgaagacacatcaatcaattgtccatccacgggatcc
ttggaactggatacgagcagcattaatagtgaggaccaagaggagcagagatcccctctt
gctggtcccattgtgaaatcacaacattcaaaaagtaaagttaagccatccaaattttca
gttttctccaaaatgccctcgtttagacgaggaaaaagtatagcgagagatgggggggtg
agtaagggtgaaatttcacccagggacttacaggacagaggggaggaccttttgagtcac
ctgacccaggatgcaggacgagaccaagagagtcagctagataactcagatgatgaagtc
ttctacaaaagcgaggttgtaaataagcaaacagagcttcaggtagatacagaggaggaa
gaggaagaggatgatgtttttggtcatggaactggtgacatggagggtttggagatgcca
cagcttaaacagagcacagatagtgaatgctcaagctacaggagaagcaaaagtacagaa
ggactaagctttcgcttgcgttttgcccaggcccacaagtctctgtcaagcttttttgag
tatcggtccatggataagtacaacgagtgtccagaatcagaagatacacggactaagctt
tcatggaagaagcagaaacgggtgaaggaggtggatcttctaaggcgtacgttgtctgtg
ccggacactgagaaagacggaactaaagttatgcagcgacatacagacccacttagcaag
cgtggtgtcctgagagatggagttggcacatccctgaaggacagtaaatcaaatgggcgc
agtaggaggtgcttatcaattacattcattgattcctctgaagccttgacgtctggtgac
tctggtccggtctcacctatggccccactagctagtcagcatttatcatgctgttccaaa
atgccatcagggaacagtgagaatccagaattgcccattagaccaatgagtcccaaacca
agcagtccaagggccgcagggcagaagcagcgattccggtacccctcttcgcgtgcaaac
actctttctctgattattctcggccagagtgttggtgtttcagagccgcccgagagaccg
aggtccctcaaacctaaagtgggacgtcagggttctctcagcccactgggaaccggcaat
catctcgaggatggcagcatagacagcccctcaccaatcagcatcattacatctatgaca
gataatgaatttgagcctagtgtatcgctgacggtatctcccggaagtcctagtctcttc
agaaactctactgtaatgaagactgtgaagagtcctcctgctggatcatccggtatgaga
accagatctagatccagcatcgggactaccctacctatgcaaggtggattgcaaacacat
tgttttagggatgatctgtggatcgaggatgagaaaaagcggcagaggaggctgacgagg
ggaacggcaaagaggggcgctcaccacctggaggagatagaagaagtgaggacccggctg
tctctatgtgcactgaaagtgtttcctggaatgccactccgaagtctgagcttctctcac
agcaccccaactgggctggactgcctcagctggagacgacgcatgtcctcccctgccgtg
atccttcctgacggagctccagagaagctgggcgtaggagatgaagctggcagtgaagag
gatatttatgaggagcttcgcaattcaggacatcgcttccctcatccagggggagcagga
gagcagctggccataaacgagctgatcagcgatggcagcgtggtgtatgctgaggcatta
tgggatcacgtcactatggacgatcaggagcttggctttaaggctggagacgtcatcgaa
gtaatggacgccacgaacaaggagtggtggtggggacgcatcctggacagtgagggctgg
tttccagctagctttgtcagattgcgtgtgaaccaggatgagccgatggaggattacctg
gcacagctggaggaggctcaggaggagcagagctctggtgttgggcttctcctcggacct
ggtctgccctgtaaagagcagatgaggaccaacgtcatcaatgagatcatgagcacagag
agggattacatcaaacacctgaaggacatctgtgagggttacatcaaacagtgccggaaa
cgcatggacatgttcacagaggagcagctgtgcaccatctttggaaacattgaggacatc
tatcggttccagaagaagttcctgaaatgtctagagaagaggttcaacaaggaggagcct
catctcagcgaaattggctcttgctttttagagcatcaaacggatttccagatctactcg
gagtactgtaacaaccacccgaacgcctgcgtccagctctccaagctcatgaagctcaac
aagtatgtgttcttcttcgaagcctgccgtctgttgcagaagatgatcgacatttctctg
gacggtttccttctcactccggtccagaagatctgcaagtacccactgcagctggccgag
ttactgaagtacaccaacccccagcacagggactacaaagatgtggaggcagctttaaat
gggatgaagaacgtggccaggctgattaatgagaggaagcggcgtctggagaacgtggat
aagattgctcagtggcagagcgctatcgaggactgggagggtgaagacatcctcagcagg
agctcggatcttatctactctggagagctcacaaagatctctccacctcatgccaagagc
cagcagcgcatgtttttcctcttcaaccaccagatggtctactgtaaaaaggttcaggat
ttgctgcgcagggacatcctgtactacaagggcaggatggacatggatcagatggaggtg
ttggatgtggaggatgggaaggacagggagctgaacgtgagcgtgaagaacgcagtgaag
ctccgttcgctcagtggagatgaggttcatctcctgtatgctaaaaaacctgaacagaaa
cagcgctggctccgagccttcagagacgagagggagcaggtccagcatgaccgagaaaca
ggtttttctatcactgaggtgcagaagaaacaggccatgctcaacgcctgtaaaagccat
ccagctggcaagcccaaagcagtgaccaggccctactacgacttcctgctgcggcagaaa
caccccacgctccccaccagcctcccgcagcagcaggtcttcatgctggccgagcctaaa
cgcaagagctccaacttctggcacaacatcggccgactgacacctttcaaaaagtga
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integrated database retrieval system
