Tachysurus fulvidraco (yellow catfish): 113649849
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Entry
113649849 CDS
T08119
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
tfd03015
mRNA surveillance pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113649849 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
113649849 (rbm8a)
03015 mRNA surveillance pathway
113649849 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113649849 (rbm8a)
03041 Spliceosome [BR:
tfd03041
]
113649849 (rbm8a)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113649849 (rbm8a)
Spliceosome [BR:
tfd03041
]
Complex C
Other components
EJC/TREX
113649849 (rbm8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
113649849
NCBI-ProteinID:
XP_027013659
LinkDB
All DBs
Position
25:1702507..1706672
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AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQELMGQPISVDWGFVRGPPKSKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggatcttcacgaagcgggaggcgaggactttcctatggatgaagat
ggcgacgaaagcattcacaagctgaaagaaaaagccaagaagaggaagggacgtggattt
ggatctgaggaaggagcgaggtccagggttagagaagattatgatacagtcgaacaggat
ggcgatgagcctggaccacaaagatctgtcgagggctggatcctgtttgtgaccggcgtt
cacgaagaggcaactgaagaagacattcacgacaaattcgcagagtttggcgagatcaag
aatctgcacctcaatttggacagaaggacaggttacctcaagggctacgctttggtagag
tatgaaacgtataaagaagcgcaggctgccatggagggactgaacggtcaggagctcatg
gggcagcccatcagcgtggactggggctttgtccgagggcctcccaagagcaagagaagg
ggaggaagaagacggagcagaagtccagacagaagacggcgctga
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