Tachysurus fulvidraco (yellow catfish): 113649858
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Entry
113649858 CDS
T08119
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113649858 (col28a1b)
Peptidases and inhibitors [BR:
tfd01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
113649858 (col28a1b)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
Dumpy_DPY
Motif
Other DBs
NCBI-GeneID:
113649858
NCBI-ProteinID:
XP_047664871
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Position
25:2273957..2291563
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AA seq
1128 aa
AA seq
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MKAKLWRSTLLCFSLLFLSHDVRSQNRKNQTNNLSTKDEKAVLVCGLELAFLLDSSESAM
LYRFEKEKEFTRSFGARVMKMQVDGWHLMPRLAALQYSSAVAIVQRFSDWQGLERFRDIV
ASMTYIGQGTYTSYAIGNATDLFVRETDNKNVRVILLMTDGSDHPRSPDILAATSEAKGH
NIKIFTISLSLRSNHKNGKLRAMASSPAQQFVHDLNDVGLEEKLLQEIKKITSSECPQVQ
ACVCDKGDRGPPGNPGGKGDPGTEGLPGQKGVKGDIGPTGPQGPDGPEGRPGYKGDKGDR
GECGAPGLKGNMGAEGPPGPRGPRAEQGPQGPPGDEGPEGQEGPKGDRGLPGATGPRGDI
GVGFPGPKGDKGNQGRPGPVGPMGKGDPGQPGPPGFPGLQGVPGFPGQGIVGPKGDQGYN
GSTGARGPPGFAPKGEKGDVGHHGPPGPIGPAGMGTQGEKGDQGPKGRPGPRGLPGISLA
GEKGDRGDPGQHGQKGQKGIGETGAKGEPGFQGVPGEPGAPGEDGARGPKGETGLLGPRG
PEGPPGKGLPGEKGELGERGARGLPGVIGPVGPIGRKGEPGGLGLPGVTGPPGTGVPGSK
GDPGPPGLPGPAGENGIGFPGPKGEKGIPGLLGPQGLKGDGYSGPPGPPGTRGLPGESGP
VGIGFPGPKGDLGSTGPPGPVGPPGIGHLGQKGSIGQTGPPGPHGPPGEGIQGPKGEPGF
QGLVGPRGAPGEGLPGQKGDRGFSGERGRKGDKGGQGEPGQTGPNGRPGEKGEPSLTREE
VVKLIQSICGCGVTCRFSPLDLVFVIDSSESVGPENFEIIKDFVNGLIDRVSVRPNITHV
GIVLYSHMTAVISDLHRPLSRDEVKSAVRRMPYMGEGTYTGSAIHKANQLFRSARPGVRK
VALVITDGQVDQRDVVKLEDAVSDAHTSNVEMFVIGVVNQSDPFYESFKRELESIASDPD
EEHIHLISDFRTLTVIESKLLVKLCEGSDGLFRQTPGPDLLPVTPGPNIPIRIQQPGASE
GTLDSTTAPSFNRESGNNLDDPLHIVRPDQHTTTEPSLILIQDEFSTGDACLQPLDPGPC
RRYIVKWYYEPKANSCAQFWFGGCHGNGNRFDTESACKKSCVINHLPR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctaagctgtggaggtcgacactgctgtgcttttcgttgttgttcctttcacac
gatgtccgaagtcaaaaccgaaaaaaccaaacgaacaacctgagcacaaaagatgaaaag
gcagttctggtgtgtgggctggagttggccttcctcctggacagctcagagagcgctatg
ttgtaccgctttgagaaggagaaggagtttacgcgctcgtttggtgctcgggtaatgaag
atgcaggtcgacggctggcacctgatgccccgcctcgccgctcttcagtacagcagcgcc
gtggccatcgtgcagagattctctgactggcaaggcctggaacgcttccgggacattgtg
gcctccatgacatacatcgggcagggcacgtacacatcctacgccatcgggaacgccacg
gacctctttgtacgtgaaaccgacaacaagaacgtaagagtgatactgctgatgaccgat
ggctccgaccatccacggagtcctgacatcctggctgcgacctcggaagccaaaggtcac
aacatcaagatcttcaccatcagcttgtcattacggagcaaccacaaaaacggcaagcta
cgagccatggctagcagtccggcgcagcagtttgtgcacgacctcaacgatgtaggcctc
gaggagaaactgcttcaggagattaaaaaaataaccagcagtgaatgtccacaagtgcaa
gcgtgtgtgtgtgacaaaggagacagaggacctccaggaaaccctgggggaaaaggagat
ccagggactgaaggactgccaggacaaaaaggtgtaaagggagacatcggacctacagga
ccccagggaccagacgggcctgagggacgacctgggtacaaaggtgataagggtgacaga
ggagaatgtggagctcctggattaaaaggaaatatgggtgccgaaggacctccagggccg
agaggtccccgagcagagcagggcccccaagggccaccaggggatgaaggacccgaagga
caggaaggcccgaaaggagatcgtggacttcctggtgcgaccggacctcgaggggatata
ggtgttggatttcccggacctaagggggacaagggaaaccagggaagaccaggtcctgta
ggtccgatgggaaaaggtgacccaggccaacctggaccaccaggatttccagggcttcaa
ggggttcctggcttccctggacaggggatagtagggccaaagggggatcaaggatataac
ggttcaactggagctcgtggaccaccaggttttgccccgaagggtgaaaagggggatgtt
ggtcaccatgggcctcctggtcccataggacctgctgggatgggaactcaaggagaaaag
ggggaccagggtccaaaaggtcgacctggccccagagggctcccagggataagtctcgct
ggtgaaaagggagatcgtggcgacccaggacaacatggacaaaaaggacagaaaggaatt
ggagagacaggagccaagggtgagcctggctttcaaggtgttccaggggagccaggtgct
ccaggtgaagacggagcaagaggaccaaagggtgaaactggtcttcttggacctagagga
ccagagggaccacctggtaaaggtctacctggagaaaagggcgagctaggagagagagga
gcaagaggactaccaggagtcattggaccagtgggtccaatagggagaaagggagaacca
ggaggtctggggcttcctggggtaactggacctccaggaacaggagtacctggaagtaag
ggggaccctgggccacctggacttccaggacctgctggagaaaacggaataggtttccca
gggccaaagggtgaaaaagggattccaggacttttaggaccacaagggctgaagggagat
ggctattctggaccacctggtcctccaggcacccggggactacctggagagtccggtcca
gtggggataggctttcctggaccaaagggggacctagggtctacaggacctccagggcca
gtagggccaccaggaattggacatttaggccaaaagggttccataggtcagaccggccca
cccggcccacatgggcccccaggagagggaatccaaggcccaaagggtgagcctggattt
caaggattggtgggaccaagaggagccccaggagagggtttaccggggcaaaagggggac
cgtggattttcaggagaacggggacgtaaaggggataaaggaggacaaggggaaccagga
caaacagggccaaatggaagaccaggcgaaaaaggagaacccagtcttactagagaagaa
gttgtcaaattaattcaatccatttgtggctgtggggtgacttgcagattcagccccttg
gacctggttttcgtgatcgacagctcggagagtgtgggtcccgaaaacttcgaaatcatt
aaagactttgtgaacggactgattgaccgtgtttccgtcaggcccaacatcacacatgtt
ggtattgtgctgtacagccacatgactgccgtgatcagtgatcttcatcgacccttgagc
cgtgatgaggtgaaatctgccgtacgccgaatgccctacatgggggagggaacctacacg
ggaagtgccatccacaaggccaatcagctgttccgctcggcccgccctggagttcggaaa
gtcgctctggtgattacagacggccaggtggaccaacgggatgtggttaagctggaggat
gcggtcagtgatgcgcacaccagcaacgttgagatgttcgtcatcggtgtggtgaatcag
agtgatccgttttatgagagcttcaagagagagctggagtccatcgcctctgacccagat
gaggagcacattcatctgattagtgacttcaggacactcactgtaatagagagcaagctt
ctggttaaactctgcgagggcagtgacggcttgtttaggcaaacgcccggtcccgatctc
ctcccggtaacgcccggacccaacatcccaatccgcatacagcagccaggagcatctgag
ggaaccttagacagcaccacagctccgtcctttaacagagagagtgggaacaacctggat
gatccattgcacattgtgagaccagaccaacacaccaccactgagccaagcctaatactg
attcaggatgaatttagtacaggtgacgcctgcctgcagccgctcgaccccgggccgtgc
cgcaggtacatagtgaaatggtattacgaacccaaggccaactcctgtgctcagttttgg
ttcggaggttgccacggcaacggtaatcggttcgacacggagagcgcctgcaagaaatcc
tgcgtcataaaccatctgcctcgctga
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