Tachysurus fulvidraco (yellow catfish): 113649928
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Entry
113649928 CDS
T08119
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113649928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113649928
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113649928
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
113649928
Messenger RNA biogenesis [BR:
tfd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
113649928
Transfer RNA biogenesis [BR:
tfd03016
]
Prokaryotic type
tRNA degradation factors
113649928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
OAF_N
Motif
Other DBs
NCBI-GeneID:
113649928
NCBI-ProteinID:
XP_027013692
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All DBs
Position
7:26644182..26665020
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AA seq
762 aa
AA seq
DB search
MRRLLSFGCSLSRRTLWSSHSTEKRVAVDLDGRKLEISTGKLARFADGSSVVQLGETSVM
VTAVSKTRPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRETGTSDSEILTSRLIDRSIRPL
FPAGYFYDTQVLCNILAADGVNNPDVLAINGASAALAVSDIPWNGPVGAVRIGIIDGEFV
VNPTRKEMSSSALNLVVAGAPSSQVVMMEAAAENILQQDFCHAIKLGVKHTQQIIHAIQQ
LARELKVVKRSPQKLFTAPPEMVEYTRQLAGEKIYAVFTDFSHDKISRDEAVNKIRLDTE
EQVKEKFPQAEPFEVIEAFNVVSKEIFRNLVLTEYRRCDGRDLTSLRDISCEVDVFKPLH
GSALFQRGQTQVLCSVTFDSVESSIKTDIITTALSGIKDKNFMLHYEFPPYATNEIGKVG
GLNRRELGHGALAEKALRPVIPKDFPFTIRVTSEVLESNGSSSMASACGGSLALMDAGVP
ISSAVAGVAVGLISKPNPEKLSEIQDYRLLTDILGIEDYNGDMDFKMAGTNKGITALQAD
VKIPGLPLKIVMEAIQQATVAKREILGIMNKTISKPRSSRKENGPVVENVRVPISRRSQF
IGPGGYNLRRLQAQTGVTISSVDEETFSVFAPTPHALHEAQEFINDICKDDQEQQLEFGA
VYTATITEVRDSGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGQQIQVKYFGRDP
TDGRMRLSRKVLQSPAATVVKTLSERQSITMGAADKQTSPSS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggttgctgtcattcggctgttcgctgtcgcggaggactttgtggtccagtcac
agcacagagaagagagttgcagtggatttagatggaaggaaacttgagatatcgacgggg
aagcttgcgagattcgcagacggtagttctgttgtacagctcggagaaacttcagtgatg
gtgaccgccgtcagcaagaccagaccttcaccatcacagttcatgcccctggtggtggat
tacaggcagaaagcagcggcagccggacgaatccccaccaactacctgcggagagaaacg
ggcaccagcgactcagagattctcaccagcagactcatcgatcgctccatcaggccgctg
tttcctgctggatatttctacgacacacaggttctgtgcaacattttagccgctgacggt
gtgaacaatccggacgtcctcgccatcaacggagcatctgctgctcttgctgtctccgat
attccctggaacggacctgtcggtgctgtgcgtatcggcattatcgacggagagtttgtc
gtgaacccgactcggaaagagatgagctccagcgccctcaatctggtggtagctggagct
ccttctagccaagtggtgatgatggaagcagctgctgagaacatcctccagcaggacttc
tgtcatgccattaaactgggagtgaagcacacgcagcagatcattcatgccatccagcag
ctggccagagagctcaaggtggtgaagcgttcaccacagaaactcttcactgccccccct
gagatggtggagtacacacgccaacttgctggtgagaagatctatgcagtcttcacagac
ttttcacatgataagatctccagagacgaagctgtgaataaaatcagactcgacacagaa
gagcaggtcaaagagaaatttcctcaagccgagccattcgaagtgatcgaggccttcaac
gtggtttctaaagagattttccgtaacctggtgctgaccgagtacagaaggtgcgacggc
cgagacttaacgtcattaagggacatttcgtgtgaagtggacgtcttcaaacctcttcac
ggttctgcgctcttccagagaggacaaacacaggtgctttgctcggtaacgttcgactct
gtggagtccagcataaagacggacatcataaccacggctctgagtgggataaaagacaag
aatttcatgctccactatgagtttcctccgtatgcgacgaatgaaatcgggaaggtggga
ggactaaacagacgagagctgggtcacggcgctctggctgaaaaagccctgagacccgtc
attcctaaagacttcccctttaccatccgagtgacctccgaggttctggagtccaacggc
tcatcgtccatggcatcggcatgtggaggcagtctggctttaatggatgcaggtgttccg
atctcctcagcggtggccggagtggctgtgggtctcatttccaaaccaaaccctgagaaa
ctctctgagattcaggactacagattactgactgacatattagggattgaggactataat
ggagacatggattttaagatggctggaacaaacaaaggcatcactgctctacaggctgat
gttaagatccctggacttcctctgaaaattgtaatggaggcaatccagcaggcgacagtg
gctaagagagagattttaggaatcatgaataaaaccatttcgaagcccagaagctcgagg
aaggagaacggccctgttgttgaaaacgttcgtgtgccgatttccagaagatctcaattc
attggtcctggaggatacaacctccgccgactacaggcccagacaggcgtgaccataagc
tcggtggacgaggagacgttctcggtgtttgccccgactcctcacgcgctgcacgaagct
caggagttcatcaacgacatctgcaaagacgaccaggaacagcagctggaattcggggct
gtgtacacggcaaccatcacggaagtcagagacagcggtgtgatggtgaagctttatccc
aacatgagcgctgtgcttctacacaactcgcagctcgatcataaacggatcaagcacccc
agtgctctgggactggaggtcggccagcagatccaggtgaaatatttcggacgcgacccc
acggacggcaggatgaggctgtcacgtaaagtgctccagtctcccgcagccacggtggtg
aagacactgagcgagaggcagagcatcaccatgggagcagcagacaaacagacgtcacct
tcctcctga
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