Tachysurus fulvidraco (yellow catfish): 113650021
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Entry
113650021 CDS
T08119
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113650021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113650021
Membrane trafficking [BR:
tfd04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
113650021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Med13_C
SSP160
hEGF
Motif
Other DBs
NCBI-GeneID:
113650021
NCBI-ProteinID:
XP_027013828
LinkDB
All DBs
Position
7:complement(26963046..27261991)
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AA seq
1496 aa
AA seq
DB search
MVLRSCPGNRLLWVGLFVCTLVDASSSLKFSGAEGQWMAFPMWNACCESEMSFNMKTKSS
HGLLVYFDDEGFCDFLELLMNNGKLNLRFSIFCAEPVAVMSDVQVNDSKWHAIMVRRNFQ
NTTLIVDNEVKWVEVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSNAVKDQVPFEGWIT
DLKVNDSAPVILNSAGVDSDACDDDNVCFNGGICNIIDNEPTCNCTETGFHGKDCTEEDN
RAKGLAHLMMGDQGKSKGKEEYVATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGL
MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNDWHDVKVTRNLRQHS
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKE
VVYKNNDVRLELSKLALQGDHKMKIHGVVAFKCENVATLDPITFETPEAFITLHKWNAKK
TGSISFDFRTTEPNGLLLFSHGRPKQQTKEAKTPVTLKVDFFAIEMLDGHLYLLLDMGSG
TTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNTVRMPYQAPGESEILDLDDHLYLGGLP
ENRAGLVFPTEVWTALLNYGFVGCVRDLFVDGQSKDVRRMAEVQKAVGVKPSCSKEAPKQ
CLSNPCQNNGICREGWNRYVCDCAATGFLGRSCERDATILSYDGSKFMKIQLPVAMHTEA
EDVTLRFRSQRAYGVLMATTSRDSADTLRLELETGRVRLTINLDCFRINCTSSKGPETLF
TGQNLNDNEWHTVRVMRRGRSLQLSVDEFQPVEGEIPGDHTQLEFHNLETGIITEKRHLS
TVPSNFIGHLQSLVFNGMAYIDLCKNGDIEYCELNAMIGFKNIIADPVTFKSRSSYVSLS
TLQAYYSMHLFFQFKTTSSDGLILYNSGDGNDFIVVELVKGYLHYVADLGNGAHLIKGNS
NKPLNDNQWHNVMISRDTNNLHTVKIDTKVTTQTTVGAKNLDLKGDLFIGGVAKDMYKEL
PKLVHAQEGFQGCLASMDLNGRLPDLISDALTCVGQIERGCEGPSTTCQEDSCSNQGVCL
QQWEGFSCDCSMTSFGGHQCNDAGTTYIFGREGGKITYTWPPNDRPSTRADRLALGFSTQ
LKDASLIRVDSSSGLGDYLKLHIKNGHVAVIFNVGTDDINIEEKSKFVNDGKYHVVKFTR
SGGNATLQVDDLPVIERYPTGNIDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQ
TTILIGGWERDKTPSFQGQMSGLYYNGLKVFNMAVEGNPNVRVEGSVRLVGEAPSSSSSS
SSSSSSSSITPQSNASTSVMETTTTTSSTTTASSRRVKQTTPRDTQQTTDDLLVASAECP
SDDEDIDPCEPSSGGLASPTGPGLKGYPDPVEVRESSSTTGMVVGIVAAAALCILILLYA
MYKYRNRDEGSYRVDESRNYISNSAQSNGTVLKEKPANVAKSAAKTKKNKDKEYYV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggtgctccgatcgtgcccaggcaatcgtctgctctgggtcggactctttgtgtgcacc
ctggtagatgccagctccagcctgaagttctctggtgctgagggccagtggatggcattc
cccatgtggaacgcctgctgtgagagtgagatgagcttcaacatgaaaaccaagagctcc
catggactcctggtgtactttgacgacgaaggcttctgcgatttcttggagctgctcatg
aacaacggcaagcttaatctccgcttctcgatcttctgcgccgagccggtggccgtgatg
tcagacgtgcaggtcaacgacagcaagtggcatgccatcatggtacggcggaacttccag
aacacaacgctcatcgtggacaacgaggtcaaatgggtggaggtgaagtccaagagacgg
gacatgactgtgttcagtcacctgttcttaggagggataccaccggagctacggtccgtg
gcgctacgcctgacatcgaacgccgtgaaggaccaggttccctttgagggttggataacg
gacttgaaagtcaacgactctgcgcctgtcattctgaacagcgcaggagtggacagtgat
gcgtgtgatgacgataacgtgtgctttaatggaggaatttgcaacatcatcgataacgaa
cccacgtgcaactgtaccgagacgggattccacggaaaagactgcaccgaagaagacaac
cgagccaaaggtctggcacacctgatgatgggagaccaaggtaaatctaaagggaaagaa
gaatacgtggcgaccttcaaaggttccgaatacttctgctacgacctgtcgcagaacccg
atacagagcagcagcgacgagatcacgctctcgttcaaaaccctgcagaggaacggactg
atgctgcacacgggcaaatcggccgactacgtcaacctggcgctgaaaaacggggcggtt
tcgttggtcattaatttggggtccggggcctttgaagccctggtggagccagtcaatgga
aagtttaatgacaatgattggcatgatgtcaaagtaacaaggaatcttcgtcagcattca
ggcattggacacgctatggttacgatatccgtggatggaattcttaccactacgggatac
acgcaggaggactacaccatgctaggctcggatgacttcttctatgtgggaggaagccct
agcacggccgacctgcccggatctcccgttagcaacaacttcatgggttgcttgaaggag
gtggtttataagaacaacgatgtccggttggagctttccaagctggctttgcagggtgac
cataagatgaagatccatggcgtggtggccttcaagtgtgaaaacgtagccactcttgat
ccaatcacctttgaaacaccggaagctttcatcacgttacataagtggaacgctaagaag
accggctccatatcctttgacttccgcactacggaaccgaacgggctacttctgttcagc
cacgggaggccaaaacagcagaccaaggaggcgaagactccggtcactcttaaggtggac
ttcttcgccattgagatgctggatggtcatttatacctgctcctagacatgggctcgggc
accaccaaaacacgagcggtcaataaaaaggtgaacgatggcgagtggtaccatgtggac
ttccagagggatggaagatcaggtacgatatcggtaaacacggtccgcatgccttatcag
gctccgggcgagagcgagatcctggacctggatgaccacctgtacctcggtggtcttcct
gagaaccgagcaggtctggtgtttcccaccgaggtgtggacggcgctgctgaattacggc
ttcgtggggtgcgtacgcgacctcttcgtcgacggccagagcaaagacgttcggcgcatg
gctgaggtccagaaggcagtaggggtgaagccgtcgtgctccaaggaagcacctaagcaa
tgcctgagtaacccatgtcagaacaacggcatctgcagagaaggatggaatcgttatgta
tgcgactgcgccgctaccgggttcctgggccggtcttgcgagagagacgccaccattcta
agctacgatggcagtaagttcatgaagatccagctcccggtggccatgcacaccgaggcc
gaggacgtcacgctcaggttccgatcgcaaagagcgtacggtgtcctgatggccaccaca
tcccgggactccgccgacacgctgcgactggagctggagaccggacgagtccgtctgacc
attaatctagactgtttcaggattaactgtacatccagtaaagggcctgagacgctgttc
actggacaaaacctgaacgataacgagtggcacacggtgcgagtgatgaggagaggaaga
agtctgcagctgtctgtggatgagtttcagcctgttgaaggtgagatcccaggtgaccac
acccagctggagttccacaaccttgagacggggatcatcacggagaagcgccacctctcc
accgttccctccaacttcatcggccacctgcagagcctggtgttcaatggcatggcctac
atcgacctgtgcaagaacggagacatcgagtactgcgagctcaacgccatgatcggcttc
aagaacatcatcgccgaccctgtgaccttcaagtctcgctccagctacgtgtccctcagc
acgctgcaggcctactactccatgcacctgttcttccagttcaagaccacgtcgtccgac
ggcctcatcctctacaacagcggagacggaaacgacttcatcgtcgtcgaactcgtaaag
ggctacctgcactacgtagcggacctggggaacggtgcccacctcattaaagggaactcc
aacaagcctctgaatgataatcagtggcacaacgtcatgatctccagagacaccaacaac
ctgcacacagtcaagatcgacaccaaggtcaccacgcagaccaccgttggagccaaaaac
ctcgacctaaagggggatctgttcatcgggggcgtggctaaagacatgtataaggagctt
cctaaactggttcatgctcaggagggatttcagggctgtctggcctccatggacctgaac
ggccgtctgccggacctcatctctgacgcgctgacctgtgtggggcaaatcgagaggggc
tgcgaaggtcccagcaccacctgtcaggaggactcttgctctaatcagggtgtgtgtctg
caacagtgggaaggtttcagttgtgactgcagcatgacgtcgttcggaggacatcagtgt
aatgatgcgggaacgacgtacatattcggacgtgaaggaggtaagatcacgtacacgtgg
cctcccaacgacaggccgagcaccagagctgacagactggcgctgggcttcagcactcag
cttaaagacgcctcgctcatcagagtggacagctcatctggactgggagactatctcaaa
ctgcacattaaaaatggccatgtggcggtgatcttcaacgtgggcacggacgacatcaac
atcgaggagaagtcgaagtttgtgaacgacggcaagtaccacgtggtgaagttcaccagg
agcgggggtaatgccacgttgcaggtggatgacctgccagtcattgagcgctaccccaca
ggcaacattgataacgaacgactggcgatcgctaggcagcgaatcccatatcgactcggt
cgagtagttgacgaatggctactcgacaaaggtcgtcagctcaccatttttaacagtcag
actacaatcctgatcggaggctgggagcgagacaagactccctccttccaaggccagatg
tcaggcctctactacaacgggctgaaagtgttcaacatggccgtcgagggaaaccctaac
gtccgtgtcgagggcagcgtgaggctggtgggcgaagcgccttcctcgtcctcctcctcg
tcctcctcctcttcttcctcctccatcacacctcagtccaacgcctccacctccgttatg
gagaccaccacgaccaccagcagcaccaccaccgcctccagccgcagagtaaagcagacc
acgcccagagacacgcagcagacgacggatgacctgttggtggcgtctgccgagtgtccg
agcgacgacgaggatatcgacccttgtgagccgagctcaggtgggttagcgagcccgaca
ggtccgggtctgaagggataccctgacccggtggaggtgcgggagtccagcagcaccaca
ggtatggtggtgggcatcgtggcagcagccgccctgtgcatcctcatcctcctctacgcc
atgtacaagtaccgcaaccgggatgaaggctcttatcgcgtggacgagagccgcaactac
atcagcaactcggcgcagtccaacggcaccgtcctcaaagagaaaccagccaacgtggcc
aagagcgccgccaagaccaagaaaaacaaggacaaggagtattacgtttga
DBGET
integrated database retrieval system