Tachysurus fulvidraco (yellow catfish): 113650084
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Entry
113650084 CDS
T08119
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagosome
tfd04514
Cell adhesion molecule (CAM) interaction
tfd04517
IgSF CAM signaling
tfd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113650084
04517 IgSF CAM signaling
113650084
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113650084
09142 Cell motility
04810 Regulation of actin cytoskeleton
113650084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113650084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113650084
04515 Cell adhesion molecules [BR:
tfd04515
]
113650084
04090 CD molecules [BR:
tfd04090
]
113650084
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
113650084
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113650084
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113650084
Cell adhesion molecules [BR:
tfd04515
]
Integrins
Integrin alpha subunits
113650084
CD molecules [BR:
tfd04090
]
Proteins
113650084
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
113650084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Copine
vWA-TerF-like
Csm1
Motif
Other DBs
NCBI-GeneID:
113650084
NCBI-ProteinID:
XP_047673068
LinkDB
All DBs
Position
8:23844444..23864280
Genome browser
AA seq
1053 aa
AA seq
DB search
MKINVPSEAVNMSLGLSMTKDRKSSNVVVCGPTIPKDCEQFTSYNGMCFKLGSNSPIPHT
LRDCPTRTDIAFLLDGSRSVSESDFSIMKNFVINMINEVKDRDFQFAVAQYSKYCEIHVQ
FNTFSSTDQILRILQVRGRTYTASAINKVVNEVFTSRAGARENVNRVLVVITDGQSNDEN
LLRDAVRNAERKNIIRYAIGVGDAFQKNAAEQELNTIASDPDNKHVFKVDDFSVLKEIQK
TLEANIIAIEGIQASGDSTRMELAQDGFTADFDENGNMIMSAVGAFQWKGGYQKYSISSG
TSLNSFQKGNGNDSYLGYSMAVAQTFRQFYIIQGAPRDKHMGAVIIYNGDNVFQALDSPE
PQIGAYYGAELCVVDLNLDSFADLLLVSAPMYNEEDQEGKVFIYTFQGSFGSQLQYIGAV
KGISGQRGRFGLTLASPADLNEDSLVDVVVGAPLEENNQGSIYIFNGRNEDIAPTFSQRI
TGSSVRNGLQFFGISLSPSALDLSEDQLPDLAVGSKGAVLLLRSRPTVDLQNTVTFIPSK
IPTKEFDCNKTLTNTVKLCFKMTRRNNDKQDLSAKINYTLTLDAKRQSYRAYFSEKKRIL
TDTIDVLLQEKCKEHVFSLEACPNDALNPIINELKYTFEGLPINQQDHLWPILRPNTKNT
SDYNLDFDINCGPDNICIDNLKVDFNFSRYSVIQIGTMQELNVTVSIVNRGENSYNSRVI
LKYPFGLSFRRSGTKEGRVECESVDSDEKATLGETTCFISKPIFKTNGLAIFDVTYGINR
ESNFDRMMKFTASASSDNDEHSPNNELFREKTIDVKYAIYVSMIRHENSTIHINFTEGEN
NLERPVHQIFKVENFLRDLSFNIFIKVPIKLGVKDIWTNKNLEIQGCSADKDEQPTIQDF
VAALKNQPEVNCSVAVCRVFKCAASLIKNQAIYYSISGNVSSGWLEQIGLKSAIFELVST
ATLDYNETTYIYSPSGSINTAPIGKVNTQVELKGEKLPLKEVIGFGVGEIVLLAVITAVL
YKTGFFKSKYKTMLEEARAAARDGGTGDSLVAE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaatgttccctctgaggctgtcaacatgtcacttgggctgtcaatgactaaa
gatcgcaagtcttcaaacgtagtggtctgtggcccaaccattcccaaggactgtgagcag
tttacttcatacaatggcatgtgttttaaactgggttccaatagtcctataccacacact
ttgagagattgtccaacaagaacagacattgctttcttgctggatgggtctagaagtgtc
agcgagagtgatttttctataatgaagaactttgttataaacatgattaacgaggtcaaa
gacagagattttcagtttgcagttgcacaatattctaaatattgtgaaatacacgtacaa
ttcaacacgttttcaagcactgatcaaatacttagaatcctacaagtgcgtggtaggacc
tacacagcttctgctatcaacaaagttgtgaatgaagtatttaccagtagggcaggggcc
agagaaaatgttaacagagtgttggtggtcatcactgatggccaatcaaatgacgaaaat
ctactgcgagatgctgttcggaatgcagagaggaagaacattattcgctatgctataggg
gtcggcgatgcctttcaaaagaatgcagcagaacaagagttgaatactattgcgtcggat
ccagacaataaacatgtatttaaagtggatgacttttctgtattgaaggaaattcaaaaa
acactggaagcaaatatcattgcaattgagggaatccaggcttcaggagactccaccagg
atggaattggcacaggatggcttcactgcagactttgatgaaaatggtaacatgataatg
agtgcagttggagcatttcagtggaaaggtggttatcagaagtacagcatttcaagtgga
acatcactaaactcctttcagaagggcaacggtaatgacagttatctaggttattccatg
gcggtagcacaaacctttaggcaattctacatcattcagggagctccaagagataagcac
atgggggcagtgatcatatacaatggagacaatgtctttcaggcactggattctcccgag
cctcaaattggtgcctattatggtgctgagttatgtgttgtggacttgaatttggacagc
ttcgcagacctcctacttgtttctgctccaatgtataatgaggaggatcaggaaggaaaa
gtcttcatctacacctttcaaggatcttttgggtcccagctacaatacataggggcagtg
aaaggaatctcgggacaaagggggaggtttggcctgacgctggcgagccctgcagatcta
aatgaagacagcctggtggatgtagtggtaggagcacctctagaagagaataaccagggc
agcatctacatctttaatgggagaaatgaagacattgccccaaccttctcccagagaatc
acaggctcgtctgtgcgcaatggactgcaattttttggtatttctctgagtccatctgct
ctggaccttagtgaagaccaactgccagatcttgctgtcggttccaaaggagctgtcttg
cttttaagatccagacccactgtggatttgcagaacacagtaactttcatcccgtccaaa
attcccaccaaagaatttgactgcaacaaaactttaacaaacacagtaaaattgtgtttc
aaaatgacgaggcggaataatgacaaacaagatttgtctgcaaagataaactatacatta
acgcttgatgccaaacgacagagctaccgggcctacttttcagaaaaaaaacgtattcta
actgacacaatagatgtgttgctacaagagaaatgcaaggaacatgtattcagtctagag
gcctgccctaatgatgcactaaacccaataattaatgagttaaagtatacatttgagggt
cttcctattaatcaacaggatcatttgtggccgatactgcgacctaatacaaagaatacc
tcagattataacctggattttgacataaactgtggacctgataacatctgcattgataat
ctcaaagtggattttaatttttctcgatactcagtcatacaaattggaacaatgcaagaa
ctgaatgtaactgtttccatagtgaacagaggggaaaattcctacaacagtcgagtaatt
cttaagtacccttttggactgtctttcaggagatccggcactaaagagggtagagtggag
tgtgaatctgtggatagtgatgaaaaagctacactgggggagacgacttgtttcatcagt
aaaccaattttcaagactaatggtttggctatctttgatgttacatatggcataaacaga
gaaagtaactttgacaggatgatgaaattcactgcatctgcttccagtgacaatgacgaa
cattcacctaacaatgaactcttcagagaaaaaaccattgatgttaaatatgccatctac
gtttcgatgattaggcatgaaaattccactattcacatcaactttactgaaggagaaaat
aaccttgagagaccagtccaccaaatattcaaggtggaaaatttcctcagggatttgagc
ttcaacattttcatcaaagtacccataaaattaggagttaaggacatctggactaataaa
aacttggagattcaaggctgcagtgcagacaaagatgagcaacccacaatccaagatttt
gtagcagcactgaaaaatcagccagaggtgaattgctctgtagctgtgtgcagagtgttt
aaatgtgctgcaagtctcattaaaaatcaagctatatactacagcatctctggtaatgtc
agctctggatggcttgaacagatcggactgaaatcagccatttttgagctggtcagtaca
gcaaccctggactacaacgaaacaacatatatctactccccctctggttctataaacact
gcacctattggcaaggttaatacccaggtggagctgaaaggggagaaattgccacttaag
gaggtaattggctttggtgtaggagaaattgtgcttttagctgttatcactgctgttctc
tataagactgggttcttcaaaagcaaatataagacgatgttggaggaagcaagagcagca
gccagagacggaggaactggagacagcctcgtggcagagtga
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integrated database retrieval system
