Tachysurus fulvidraco (yellow catfish): 113650158
Help
Entry
113650158 CDS
T08119
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113650158 (pif1)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113650158 (pif1)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113650158 (pif1)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113650158 (pif1)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
113650158 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
DEAD
Herpes_Helicase
UvrD_C_2
Mg_chelatase
RsgA_GTPase
AAA_5
AAA_7
ABC_tran
AAA_16
PhoH
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
113650158
NCBI-ProteinID:
XP_027014102
LinkDB
All DBs
Position
22:1724681..1732528
Genome browser
AA seq
643 aa
AA seq
DB search
MLHVEDGARLDCTVAVERVSGASAGHAVQRRVLRRAAVTLGRDEFRELVLRVQDIRGGPH
ESFALRSEFRLFTRFVKDGKCTVNFSQNNTQLLISDCPPDRLKTFLKTLSIKHEASRGSN
PVSERARMRAGVPRSFEIISPVQQKDIQKANELRRKVNTPVQVTVLSERAVNKTVNRQQV
KRPRTDGDTNLVKALHPHKKPVLTLPVAQKLSKEQMAVLNAVLSGKNVFFTGSAGTGKSF
LLKRIVGSLPPKSTYATASTGVAACHIGGTTLHSFAGVGSGSAPLDQCLELAQRPGVLQH
WTSCKHLIIDEISMVEAEFFDKLESIARSIRRSSEPFGGIQLIVCGDFLQLPPVTKGKEK
PSFCFQARSWRKCIHVNMELTEVRRQTDRTFISLLQAIRLGRVTEEVTARLLKSASNPIE
RDGILATRLCTHKDDVELTNENKLQQLPGPLRVFEALDSDPMLVKTIDAQSPVGHRLQLK
VGAQVMLTKNLDVQRGLVNGARGVVVDFLPGNQGLPRVRFLCGAVEVMKRERWTFKAVGG
LYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVMDF
DPRVVQANSDVVMFYKKLKRDRLLLQSSMNNFVGKSNKENEAW
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttgcacgtggaggacggtgcgagattggactgcactgttgcagtggagcgtgtgagt
ggagcatcagcgggtcatgcggtacagcgccgggttcttcgccgtgccgcggtcactctg
ggacgggacgagttcagggagctggtgctgcgcgttcaggacatccgtggtggacctcat
gaaagcttcgctttacgtagtgagttccggctcttcacgcggtttgtcaaagacggcaag
tgtacggtgaacttctctcaaaacaacacgcagcttctgatctctgactgtccacctgac
cgcttgaaaaccttcctgaagaccctgagtataaagcatgaagcctcacgtggcagtaac
cctgtcagcgaaagggcccggatgcgggcaggtgtcccgaggagcttcgagatcatcagc
cctgtgcagcaaaaagacatccagaaagccaacgagttaaggagaaaagtgaacaccccg
gtgcaggtgaccgtgctgagtgagagagcggtgaacaagactgtcaatcgacagcaggtc
aaaagaccccgaacggacggagacaccaacctggttaaagctcttcaccctcacaagaag
ccggtcctgacgttgccagttgcgcagaaactcagcaaagaacagatggcggtgttgaat
gcagtgctgagtgggaagaacgtgtttttcactggaagtgcaggtacggggaagtccttc
ctgttgaagaggattgtaggatcgcttcctccgaaaagcacgtacgctacagcgagcacc
ggtgtagctgcctgtcatataggagggacgacgttacacagtttcgcaggtgtcggctcg
ggttcagctcctctggaccagtgtctggagcttgcgcagcgacccggagtcctgcagcac
tggacaagctgcaaacacctcatcattgacgagatctccatggtggaggcagagttcttc
gacaagctggagtctatcgccagatcaattagaagatcctctgagcctttcggaggaatt
cagctgatcgtgtgtggagattttctccagcttcctcccgtcactaaaggaaaagagaaa
cccagcttctgcttccaggcgaggagctggaggaagtgcatccacgtgaacatggagctg
accgaggtgcgcaggcagacggaccgaaccttcatctcgctactgcaggccatccgactg
ggaagagtcacagaggaagtcactgcccggctcctgaagagcgccagcaaccccatcgag
cgggacgggatcctagcgaccaggctgtgtacgcacaaggacgacgtggagctcactaac
gagaacaaactccagcagctgccaggacccttgcgtgtgttcgaggcgttggacagcgac
ccgatgctcgttaaaaccatcgacgcacaaagtccagtgggtcacaggttacagctgaaa
gtgggagctcaggttatgctgactaaaaacctggatgtccagagagggctggtgaacgga
gcgagaggcgtcgtggttgacttcctaccaggaaatcaaggcctcccgagagtacgcttc
ctgtgcggtgctgtagaagtgatgaagcgcgagcgctggacgtttaaggcggtgggaggc
ttgtacctcagccgacagcagctcccgttaaagctagcctgggccatctccatccacaag
agtcaaggcatgactctggactgtgtggagatctccctggctcgtgtgtttgagagcggt
caggcttacgtagctctgtctcgagcccgcagtctggaaggtcttcgcgtcatggacttt
gacccccgagtggtccaggcgaactcggacgttgtgatgttctacaagaagctgaagcga
gaccgactcctcctgcagtcctccatgaacaactttgttgggaaaagcaacaaggagaat
gaagcttggtga
DBGET
integrated database retrieval system
