Tachysurus fulvidraco (yellow catfish): 113650271
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Entry
113650271 CDS
T08119
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113650271 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113650271 (rabgef1)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113650271 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
113650271 (rabgef1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
RecG_N
DUF3492
Motif
Other DBs
NCBI-GeneID:
113650271
NCBI-ProteinID:
XP_027014298
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Position
20:527415..534312
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AA seq
535 aa
AA seq
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MSQRSERRGIHVDQSELLCKKGCGYYGNAAWQGLCSKCWREEYQRARQKQIQEDWELAEK
LQREEDAAYASSHGPQSQPSLTPFSKFEEKKTNEKTRKVTTVKKFFSPSSRSTAKKEKGR
DEEREKEREREKERGEKVQGRRESHGETLLRDLKGIFTHSWEIVSPTEESHEAKTHSPSF
VRQSSVETDQVSREFVEFLKSLKPGREIHKQSRAFVESMGNKKDLGADELSECVQDFYQN
MSDRLLSHFKGSSEKVERVMDQVEKYIMTRLYKSVFCPETTDDEKKDLTTQHRIRALHWV
TIQMLCVPVDEEIPEAADSVVKAITDIIEMDSKRVPRDKLACITSCSKHIFNAIRVTKKE
PASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMSGEDGYYFTNLCCAVAFIEK
LDAHSLNLSVEDFERHMCGGCGSGEISPRRRSESASPWPIELLSALHKRQQQVLVEAQDL
QVELQRWQEGVASEVQDILDKYPLEFKKHAAHTIDSENEENDRLPPPLQPQVFAG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcgatctgagcggcgagggatccatgtggaccagtcagagctgctgtgtaag
aaaggatgtggttactatggtaacgcagcctggcaggggctgtgctccaagtgctggagg
gaagagtaccagcgtgcacgacagaaacagatccaggaggactgggaacttgctgagaag
ttacagagggaggaagacgcggcgtacgccagcagtcacggccctcagtctcagccttct
ctcactcctttctccaagttcgaggagaaaaaaaccaacgagaaaacacgcaaagtgaca
acagtgaaaaagttcttcagcccatcatcacgcagcacggccaagaaagagaaagggagg
gatgaggagagagagaaagagagagagagggagaaagagagaggagagaaggtgcagggc
aggagggagagtcacggagagacactgctgcgagatctgaagggtatatttacacactcg
tgggagatcgtgtctccgactgaagagagtcatgaggcgaagacccacagtccgtcgttt
gtgcgtcagtcgagtgtggagacagatcaggtgtccagggaatttgtggagttcctgaag
agtttaaaacctggacgagaaatccacaaacagagccgagccttcgtggagagcatgggg
aataaaaaggacctcggtgctgacgagctctcagagtgtgtgcaggatttctaccagaac
atgtctgaccgtctcctctctcactttaaaggttcctctgagaaggtggagcgagtgatg
gaccaggtggagaagtacatcatgactcgtctctacaagagtgtgttctgtcctgagacc
actgacgatgaaaagaaagatctgaccacgcagcacaggatccgggcattacactgggtg
accatccagatgctgtgtgttcctgtggatgaagaaattccagaagcagctgatagtgta
gtaaaggccattacagatataatcgagatggactcgaagcgtgtgccgagagataagctg
gcctgcatcaccagctgcagcaaacacatcttcaacgccatcagggtgacgaagaaggag
ccggcgtcggccgacgatttcctccctacactcatttacatcgtgctgaaggccaacccg
ccgcgcctgcagtccaacatccagtacatcacacgcttctgcaacccgagcaggctgatg
agcggagaggacgggtactacttcaccaacctgtgttgtgcagtggcgtttatcgagaag
ctggacgctcactcactcaacctgagcgtggaggatttcgagcgtcacatgtgcggcggc
tgtggatccggtgagatttccccgcgcaggagatccgaatcggcgtccccgtggccgatc
gagttgctctccgctctgcacaaacggcagcagcaggttctggtggaggcacaggatctt
caggttgagctccagcgctggcaggagggcgtggccagcgaggtgcaggacatcctcgac
aaatatccgctagagttcaaaaagcatgcagcacataccattgattctgagaacgaggag
aacgaccggctgcccccacccctgcagcctcaagtgttcgccggttag
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