Tachysurus fulvidraco (yellow catfish): 113650287
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Entry
113650287 CDS
T08119
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113650287 (fxr1)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113650287 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
113650287 (fxr1)
mRNA cycle factors
Stress granule specific factors
113650287 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
Agenet
KH_1
FXR_C1
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
113650287
NCBI-ProteinID:
XP_027014369
LinkDB
All DBs
Position
2:32148414..32161537
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AA seq
663 aa
AA seq
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MDELTVEVRGSNGAYYKGFVKDVHDDSLTISFENNWQPEKQVPFSGVRLPPPADVKKEIG
EGDEVEIYSRANEQEPSGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNPNKA
VTKNTFYKCTIPVPDDLKAACENELAHKDFKKSVGASRIVYQPETGELLVLSVNEVTVKR
VSLLSDMHLRSIRTKLMLVYRNEEATKHLECTKQLASAFQEEFTVREDLMGLAIGSHGTN
IQQARKIPGVTAIELDEESSTFRVYGETVEAVQKARSCLEFLEESVQIPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRVEGDNDNNLPRQEGMVPFTFVGIKESIGNVQVLLEYHIAYLNE
VEQLRLERLQIDEQLRQIGSGFRPVPARSTEKDKEKSDRRDNNVSAVSLHTGRSYTGRGR
ARRTANHNSAYGMNSEHSYTSETDSERRDELSEFSVREDEDERGVQPRDSRRRVAAVRGR
GSSGVRGRGAGRVPGSTMSSVLKDPDRNPYSILDTSESDQTADAEASECEASSRSRRSRR
RRPKSDDSTSLSENGLDEPEPKPPRQNHSRRRRVRPPEERQPVTVADYISRAESHSRQRT
PRDLKKNKKDLDQVDVISEHRVSKQLANGPDANTEEQKKAPQKASKETIPAKPSVVNGLS
QTS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactgacggtcgaggttcgcggctccaatggagcttattataagggcttcgtc
aaagatgttcatgacgactcgctcactatctcgttcgaaaacaattggcagccagagaaa
caggtcccgttcagtggcgtgcgcttgcctcctcctgctgacgtgaagaaggagatcggt
gagggagatgaagtagagatttactcgagggcgaacgagcaggaaccgtctggctggtgg
ctcgccaaagtccgcatgatgaagggagatttctacgtgatcgagtacgcggcctgtgac
gccacgtacaatgagattgtcacgttcgagcgtctgcgaccggtgaatccgaacaaagcc
gtgacgaaaaacaccttctataagtgcactattcctgttcctgatgatctgaaggctgcc
tgtgagaacgagctcgctcataaggactttaagaagtctgtaggagcgagcaggattgtt
taccaacctgaaaccggcgagttgctcgttctgtctgtaaacgaggtgacagtgaagaga
gtttctctcctgagcgacatgcacttgaggagcatccggactaaactcatgctcgtgtac
aggaacgaggaggccacaaagcacttagagtgcacgaagcagctagcttctgctttccag
gaggagttcacagtgcgagaggatctgatgggtctcgccatcggcagccacggcacaaat
atacagcaggcgcggaaaattccaggtgtgacggccatcgagctggacgaagagagcagc
acattcagggtttacggagagaccgttgaagccgtccagaaagcaaggagctgcctagag
tttctggaagagtcggtacaaattcccagaaatcttgttggcaaggtgattggtaaaaat
ggcaaagtcattcaggagattgtggataaatccggcgtagtgagagtgcgggtcgaagga
gacaacgacaacaaccttcccagacaagagggaatggtgccattcacgtttgttggcata
aaagagagcattggaaatgttcaggtccttctggaataccacattgcttacctgaatgag
gtggaacagttgaggttggagcgactgcagattgacgagcagctccgtcagatcggttcg
gggttccggcccgttccggcacgttccactgagaaagacaaagaaaagagcgacaggagg
gacaacaacgtctctgcagtctcgttgcacacggggcgctcctacacaggccggggacgt
gcacgcaggactgccaaccacaactccgcttatggaatgaactctgagcactcgtacacc
tcggagacggattctgagcggagagacgagctgagtgaattctctgtaagagaagatgag
gatgagcgcggcgtccagcccagagacagcaggaggagagtggcagcagtcagaggtcgc
ggtagttcaggagtcagaggtcgtggggctggaagagtgccagggagcaccatgagctca
gttctgaaggatccagaccggaacccgtacagtattttggacacctctgagtcggatcag
actgccgatgcagaagccagcgagtgtgaagcgagttctcggagccggcgctcgcgtcga
agacgccctaaatctgacgacagcacatcactcagtgagaacggtctcgacgagcctgaa
cctaagcccccacggcaaaaccacagccgccgccgccgtgttcggcccccagaagagaga
cagccagtcactgtggctgattacatatcacgagctgaatcccacagcaggcagagaacg
ccacgagacctgaagaagaataaaaaggacttggatcaggtggacgtgatatctgagcac
agggtgtccaaacaactcgctaacggtcccgatgctaacactgaagagcaaaaaaaggca
ccacagaaggcttccaaggaaacgatccccgccaagccaagcgtcgttaacggactctcc
caaacgtcctga
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