Tachysurus fulvidraco (yellow catfish): 113650444
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Entry
113650444 CDS
T08119
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113650444 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113650444 (nup85)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113650444 (nup85)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113650444 (nup85)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113650444 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_19
Motif
Other DBs
NCBI-GeneID:
113650444
NCBI-ProteinID:
XP_027014617
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All DBs
Position
7:3049339..3056129
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AA seq
649 aa
AA seq
DB search
MEELDVEPTTTSIPGVGFKQRHLGFEWGPGDLLVYETNFKLQGPGSGGSGGPSVHMVRRD
EDIYSPILRKLFNESHHIFVGLQNITDDVPSKNKKPQFVSISKNYRSVIRACMEELQQVA
VSTEVTQYHNQVSILLAIELIWNLCEVLFIDAASAGSLLLHLLDWVRLHKADVDEKAREV
LQSESPTRHHSYWDVVMCFVLQGRMDEARQVLQKQASLQPESRAMYQMMDNLLHKMPVFN
PSGAQTLTEFDVKWRHWHEECDRCLQDNSFASSRHLETICKVLVGDEDTLLEQKELLGSW
YHLLISRLLFSHPTVKPAELHYYAQSSMDMFLDSHSAPEPLDSILLAAFEFDLHQVIKDC
SIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFSHHSLWQLAVDYF
DHCPEFGRVYLELQIERVPLETERKALKVLRICEKRQMNEQVRSICKIMAKRALSNNRLG
SALSWSIRAKDAAFATLISERFLQDYCTRGSFSDLDLIDNLGPAMLLSDRLTFLGKYREF
HRLYGEKKFTEAAKLLLSLMTAKIAPRSFWMTLLIDALPLLEQKEVIFSVDQTHELMFCL
EELTSDSELKPERLAQDDDDVECTKLELLRLALARNLAMAIVKEGTVEA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattagatgtagagccgacaaccacgtcgatccccggcgtagggtttaaacag
agacatctgggctttgagtggggaccaggagacctgctggtgtacgagaccaactttaaa
ttacaaggtccgggttctggaggctctggaggtccctccgtccacatggtgcgcagagat
gaggacatctactcgcccatcctgcgcaagctcttcaacgagtcacatcatatcttcgtc
gggctgcagaacatcacagacgacgttccgagcaagaacaagaaaccgcagtttgtgagc
atcagtaagaactacaggtctgtaatacgagcctgtatggaggaactgcagcaggttgca
gtatccactgaagtcacacagtaccacaaccaggtgtccattctcttagcgatcgagctc
atctggaatctgtgtgaggttcttttcatcgacgccgcatcagccggatcgctcttgttg
cacctgctggactgggtgcgtttacacaaagctgacgtggatgagaaagcgagggaagtc
cttcagagtgaaagccccacacgtcatcacagttactgggatgtggtgatgtgttttgtc
ctgcagggtcgtatggacgaggctcgacaggttctgcagaaacaggcatctctacagccg
gagtccagagccatgtatcagatgatggacaacctgctgcacaaaatgcctgtgtttaat
cccagtggcgctcagaccctcacagagtttgatgtaaagtggaggcactggcacgaggag
tgtgatcgctgtctccaagacaactcctttgctagcagccgtcacctggagaccatctgc
aaggtcctggtgggtgatgaggacactctgctggagcagaaagagctgctgggatcctgg
taccatttactgatcagccgtctgctgttctctcatcctactgttaaacccgctgagctg
cactactatgctcagtcgagtatggacatgttcctggactcccacagtgctccagagcct
ctggacagcatcttacttgctgcatttgagtttgaccttcatcaagttattaaagactgc
agcattgccctaaacaattggtggtttgtggctcacctgactgacctgctggatcactgc
aaactcctgcaatctcacaacctccattttggctctaacctgcgggagttcctggtgctg
gagtacgcctctggactcttctctcatcacagtctgtggcagctggcagtagattatttt
gatcactgccctgagtttggtcgtgtgtatctggagctgcagatcgagagagttcctctg
gagacggagcgcaaagcactgaaggtgctcaggatctgtgaaaagagacagatgaatgaa
caagtgcgcagtatctgtaagatcatggctaaaagggctctcagtaataacagactgggt
tctgctctgtcctggagtatcagagccaaagacgccgccttcgccacactcatctctgag
aggtttctgcaggattactgcacacgtggctccttctctgatctggatctgatcgataac
ctcggacctgccatgctcctgagcgacagactcacattcctcgggaagtatcgtgagttc
caccggctgtacggagaaaagaagtttaccgaggcggccaagctcctgctctcactcatg
acagcaaagatcgctccacgcagcttctggatgactctgctcatagacgccctgccctta
ctggagcaaaaagaggtgatcttttcagtggatcagacacatgaactcatgttctgtcta
gaggaactgacgtctgacagcgagctcaaaccagagcgcctagcacaggatgatgatgat
gttgaatgcacaaaactggagctgctgagattggctctggctcgtaacctggcgatggcc
atcgtgaaggaaggaacagtcgaggcctaa
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