Tachysurus fulvidraco (yellow catfish): 113650489
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Entry
113650489 CDS
T08119
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113650489 (trmt13)
Enzymes [BR:
tfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
113650489 (trmt13)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113650489 (trmt13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
113650489
NCBI-ProteinID:
XP_027014686
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Position
2:complement(31665422..31670578)
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AA seq
458 aa
AA seq
DB search
MAAATSDGVSAPLPGRCGFYVVKKKRYCKMVVGKGKTFCGEHGNADSESERKRIPCPLDP
KHTVFEDSLAKHLKKCNSKEKPKPVYYVKDINAGSVTEEEIAIDEVSIAERSKEELYHLI
QKLKTAVKGLNTEPDTSLLSHPALNEALNDPKNGNFAFKHLKQQASILGNMEALELLGPE
RCYVEFGAGKGKLSHWIHVALQEAENVHFLLVERSSTRFKVDGKHKSTDSTFDRLQVDIQ
HLDLSRVPFLQEKQLPVIAVGKHLCGAATDLALRCLFERSTKDKDIEPPTKRIKLQEGGE
DVMQGSEGSEEVVVSGLTIALCCHHRCEWRHYVGKDFFRERGLGATEFSAFQRMSSWATC
GMSRVKSSLNPEKSSQEIKDEEEEGEEVEHEGSSESFPDHLNNAISAEERERIGRLCKML
IDHGRLHYLQQRGFKPSLRFYTSLDVSLENVLLTALPS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccacttcagacggagtttcagctcctttacctggaagatgcggtttttac
gtggtgaaaaagaaacgttattgcaaaatggtagttggaaaagggaaaacgttttgcggt
gaacacggaaatgcggattcagagagcgagagaaaacggatcccctgccctctggaccca
aagcacactgtgtttgaggacagtttggcaaaacacctaaaaaagtgtaattcgaaggaa
aagcccaaacctgtctattatgtgaaagacatcaatgctgggtctgtaaccgaagaggaa
attgccatagatgaggtgtccattgctgagcgatctaaagaggagctttatcatcttata
cagaaattgaagactgcagtgaaaggattaaacacggagcctgacactagccttctctct
catccggctttaaacgaagctcttaatgatcccaagaatgggaactttgcttttaaacac
cttaagcagcaggcctcgatcttggggaatatggaggccctggagctgcttgggccagag
aggtgttatgtggagtttggtgctggaaaaggtaaactttcccactggattcatgttgcc
cttcaggaagcagaaaatgtccacttcctgttagtggagagatccagtactcgctttaag
gtagatggcaaacacaaaagcacagactcaaccttcgacaggctgcaggttgacattcag
caccttgacttaagcagagttccgtttttacaagaaaagcaacttcctgtaattgcagtg
ggcaaacacctatgtggcgcagcaacagatttggctctgcggtgtttatttgagcgcagt
acaaaagacaaagacattgaacctcccactaaacgtataaaacttcaggaaggaggtgag
gacgtgatgcagggttctgaaggcagtgaggaggttgtagtatcggggctcactattgca
ctctgctgccatcatcgctgtgaatggaggcattatgttggaaaggactttttcagagaa
cgaggtcttggagccacagagttttctgctttccagcgcatgtccagctgggctacatgt
ggcatgagcagagtcaaatcctccttaaatcctgagaaatcctcacaagagatcaaggat
gaagaagaagaaggagaagaggttgaacatgaagggagttctgaaagctttcctgatcat
ctcaacaatgccatttcagcagaggagcgtgaacgtatcggacgcctgtgcaagatgctg
atcgaccacggcaggctgcattacctccagcagcgaggcttcaaacccagcctcaggttt
tacaccagtttggacgtgtctttagagaatgtgcttctgactgcacttcccagctaa
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