Tachysurus fulvidraco (yellow catfish): 113650640
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Entry
113650640 CDS
T08119
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113650640 (mms19)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113650640 (mms19)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113650640 (mms19)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
113650640 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_N
MMS19_C
TOR1L1_N
Ketoacyl-synt_2
NOL11_N
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
113650640
NCBI-ProteinID:
XP_027014879
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All DBs
Position
8:complement(21947861..21974111)
Genome browser
AA seq
1030 aa
AA seq
DB search
MAADGTELLGLVEEFVSGQVDSSAANVSRGVKTGHFSILQLVEALGSSLTSSQTQTRGRG
VQLLSQVLQECYSGLSESEVKVLVVFYENRLKDHYAVTPHVLRGLSALAKCTVLPPGAAV
SILKALFQDVNVQSLMLSERSCVYNILISLMDSREEELKGLGPDFVFGFVQAVDGERDPR
NLLLAFQIARNIIYRGYDLNQFTEELFEVTSCYFPIDFTPPPNDPHNITQEDLILALRDV
LTGTPRFAEFLLPLLIEKIDSDLQNSKVDSLQTLAACAPVYGHKELAEFLPGLWSSIRRE
VFQTASERVESAGLSALSAITSCLSRTVLTSDSGDTLQTFLELVLKDCQHHLCEPDLKLV
WPSAKLLQAACGASYRASLIVTAAVLPVLFEQYNTRTQCAHRRTLLEVLQGFIQPTVSSR
PAEQEENVLLPFQKALSSVVFSALTESSANLQVTATKVITTLAQQPGLIEKTDVDITVDH
LTKLVLEEDDAQVSLAVMNCAGSMARLHPAVFISRMVPKLRDQIFTEPMAEGDASYLTPS
RSKAATMQRCVTALATVSSQLSLVQESAPVLLQVLKAVHKGNGGFSTEEAIWACQGLRRM
AEHAHHTLEIGDFFHKVVIPQLLGLFLHAALQSQKCSGHMSPLTEEEVLSAIVPVVSTAC
AALQPVPAAQMAAQTVALFLDGDVSFLPENAYPDQLQLLKIQSDCCSQSQLVCLLMASVC
SLSQQVEIPHIDRLLVQLEELIFTCTHSFSYTSAAKCFAGLINKRAAGQALDAVLEKTLK
RINTTLDCESPAQRVQAFTLLIWVVKALLLRYHPLSVNLTDKLFCLLSDDHLASQAADSF
SLLMSDSPDVLNRSCHADVRIMYRQRFFTENSAKLVQGFNSAEQEKRSVFLKALSHIVNN
LPRQVQLTELPPLLPLLLEALSCPDEAVQLSTLSCLQPLLLEPPPALTAQLEALFTRLLV
LTSSPAMKARIATLRCIHALSRLPGHMVLPFRARVLRCLAKPLDDKKRLVRKEAVATRSE
WFLLGSPGGR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgacggtacagaactgttagggctggttgaggaatttgtatcgggacaagtt
gacagttcagctgcaaatgtctcgagaggtgttaagactggacatttctccatacttcag
ctggttgaggcacttgggtcgagtttaacaagctctcagactcagactcgtggccgaggt
gtgcagctcctatcgcaagtcctgcaggaatgctacagcggcctttcagagagcgaagtg
aaggtcctggtggtgttttatgagaacaggctaaaggatcactatgccgtcactccacac
gtcctccgtggactcagcgctctggccaagtgcacggtgctgcctcctggtgcagcagtt
tctattctgaaagccctcttccaggatgtcaatgtccagtccctgatgctgtcggaacgc
tcgtgtgtctacaacatcctcatcagcctcatggactcgagagaggaagagctgaaaggt
ttgggtccagactttgtgtttggatttgtgcaggctgtcgatggagaacgtgaccctcgc
aacctgctgctggccttccagatagccagaaacatcatctacagaggttatgaccttaat
cagtttacagaggagctgtttgaagtcacatcctgctacttcccgatagacttcacgcct
ccgcccaacgacccgcacaacatcacgcaggaggacctcatcctggctctacgggacgtt
cttacaggaacaccacgattcgcagagttcctgctgccgttactgatcgagaagatcgac
tctgacctccagaactccaaggtggactccctgcagacgctggctgcttgtgcacctgtt
tacggacacaaagagctggccgagttcctcccaggcctctggtcctccatacgcagagag
gtattccagacagcaagtgagcgagtcgagtcagcgggtctctctgctcttagcgccatc
acgtcctgcctgtctcgcaccgttctcacatcagactcgggagacactctgcaaacgttt
ctggagctcgtcctcaaagactgtcagcaccacctgtgtgagcccgatctgaagctggtg
tggccgagcgcaaagctgctgcaggctgcatgtggcgcctcctacagggcaagcctcatt
gtgacggcggcggtgctgcctgtactgtttgagcagtacaacaccagaactcagtgtgct
catcggcgcactctgttggaggtgttgcaaggattcattcagcccactgtgagcagccgg
cctgcagaacaagaggagaacgtgctgctccctttccagaaggctctcagcagcgtggtg
ttttctgcgctgactgagtccagtgcaaatcttcaagtcacagctacaaaagttattacc
acgctggcccagcagcctggccttatagagaaaaccgatgtggacataacagtggatcac
cttacaaagctggtcttagaagaggacgatgcacaagtcagtttggcagttatgaactgc
gcaggatcgatggctcgtctccatccggccgtcttcatttcccgaatggttccgaaactg
agggatcaaatcttcacagagccaatggctgaaggagacgcttcctatctcactccgagt
cgaagtaaagcggcaacaatgcagcgctgcgtcacggctctggccaccgtctcgtctcag
ctgagtttggtgcaggagagcgcgcctgtactactccaggtcttaaaagctgtacacaaa
ggtaacggcggcttctcgacagaggaggcgatttgggcatgtcagggtctgcggaggatg
gccgagcacgctcaccacacgctggaaatcggtgactttttccacaaggttgtcattcca
caattactgggcctgttcctgcatgcagctctgcagagtcagaagtgctctggacacatg
agtcccctcacagaagaggaggtgctgtctgctatagttcctgtcgtaagcacagcttgt
gcagcattacagccagtacctgctgctcaaatggctgcccagacagttgccctgttcttg
gacggagacgtgtcattcctgccagaaaatgcttatccagaccagcttcagctgctcaag
atccagtcagactgctgctcccagtcacagcttgtgtgcttgctaatggcctcggtgtgt
tccctttcacaacaggtggagattcctcacatcgacaggcttctagtccagttggaggag
ctgatattcacctgtacacactcgttctcctacacatccgctgccaaatgttttgccggc
ctgatcaacaaaagagcagcaggccaagctctggatgctgttctggagaagaccttgaaa
agaataaatacgacattagactgtgaatccccggcacagcgagttcaagccttcactctg
ctaatctgggtggtaaaggctttgcttctgcgctaccatcctctatctgtgaacttaact
gacaagcttttctgcctgctgagcgacgatcacttagcttctcaggcagcagacagtttc
tcgctacttatgagcgattctccagatgtgctgaaccgcagctgtcatgccgacgtgcgc
attatgtaccgccagcgattctttaccgagaattctgctaaactcgtccaaggcttcaac
agtgcagagcaagaaaagaggtctgtgttcctgaaggccttgtcacacatcgtcaataat
ctgcccagacaagtgcaactgacggagcttccacctttgctgcccctgcttctggaagcg
ctgtcatgtcctgacgaggcggtgcagctctctaccctctcctgccttcagccgctgctc
ctggaacctccacctgctctcacggcacagctggaggctcttttcacccgcctgctggtt
ctaacttccagccctgccatgaaagcgaggattgccacgctgcgctgcatccacgccctc
tcccgcctgcctggtcacatggtgttgcctttccgtgccagggtcctgcgctgtctcgct
aagccgctagatgacaagaagagacttgtgagaaaggaggcggtggcaacacggagcgaa
tggtttttgttagggagtccgggaggaaggtga
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