Tachysurus fulvidraco (yellow catfish): 113650736
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Entry
113650736 CDS
T08119
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04144
Endocytosis
tfd04517
IgSF CAM signaling
tfd04530
Tight junction
tfd04810
Regulation of actin cytoskeleton
tfd05100
Bacterial invasion of epithelial cells
tfd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113650736 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113650736 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
113650736 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
113650736 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113650736 (arpc1a)
05100 Bacterial invasion of epithelial cells
113650736 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113650736 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113650736 (arpc1a)
Membrane trafficking [BR:
tfd04131
]
Others
Actin-binding proteins
Arp2/3 complex
113650736 (arpc1a)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
113650736 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
EIF3I
Rax2
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
113650736
NCBI-ProteinID:
XP_027015023
LinkDB
All DBs
Position
24:14458358..14463064
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AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
APTPWGSKMPFGQVMAEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVNVVDPTKSLTPS
SLKTEFLALLSVTFVSENNIVAAGHDCCPMLFTFDDGGNLTFMSKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccatcagtttctcttggagcccatcacatgccatgcatggaacagggacagg
actcaaatcgctatcagtccaaacaaccatgaggtccatatatacaagaagagtgggaat
cagtgggtgaaagcccatgaactaaaagaacacaatgggcacattacaggcattgattgg
gctcctaaaagtgatcggattgtaacctgcggagcggatcgtaacgcttacgtgtggagc
cagaaggacggtgtgtggaaacccactctcgtcatcctcaggatcaatcgtgccgccacg
tttgtcaagtggtctcctctggagaacaagtttgcggtgggcagcggcgctcgcctcata
tctgtttgctattttgagtctgaaaatgactggtgggtgagcaaacatatcaagaaaccg
atccgctccactgtcctcagtctggactggcatccaaacaatgtgcttctggcagctggg
tcatgcgactttaaatgcagggtgttttctgcatacatcaaggaagtggacgagaagcca
gctccaactccatggggatccaagatgccgtttggccaagtgatggcagagtttggtgga
gcaggcagcggaggatgggtccacagtgtctgtttctctgccagtggaaatcgactggcc
tgggtcagccatgacagcactgtgaatgtggtggatcccacaaaaagcttaacaccaagc
tcgttgaagaccgagttccttgcccttttgagtgtgacctttgtgtctgagaacaacatt
gtagcagcgggtcatgattgctgcccaatgctgttcacttttgatgatggtggaaacttg
accttcatgtccaagttggatattccaaagcagagcatccaacgcaacatctctgccatg
gagcgcttccgcaacatggacaaaagagccactactgaggaccgcaatagcactctggag
acccttcaccagaacagcatcacccaagtgtctatatatgaaggagacaaaagagattgt
cgcaaattctgcactacaggaatcgatggagcgatgaccatatgggactttaagacctta
gagtcttctatccaaggcctgcggatcatgtaa
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