Tachysurus fulvidraco (yellow catfish): 113651087
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Entry
113651087 CDS
T08119
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b
KO
K10839
UV excision repair protein RAD23
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03420
Nucleotide excision repair
tfd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113651087 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
113651087 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tfd03051
]
113651087 (rad23ab)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113651087 (rad23ab)
Proteasome [BR:
tfd03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
113651087 (rad23ab)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113651087 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Rad60-SLD_2
Crinkler
Methyltransf_10
Ubiquitin_2
UBA_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
113651087
NCBI-ProteinID:
XP_027015536
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All DBs
Position
2:30154443..30162016
Genome browser
AA seq
473 aa
AA seq
DB search
MLTITLKTLQQQTFKIQIDEELTVRALKEKIESEKGQDAYPIAGQKLIYAGKILNDDIPL
KEYKIEEKNFVVVMITKPKSAALPPVVAIPLPDLSPEALPIPARPPSAPAAPVPIPSPTS
TSATTDVSTPTTAPAPMITPTTVSAPTITPTTAPAPTVTSTTAPAPTITPAPAPAPAPVP
TSTLTEPVQSVELPSPPDTVPSAAAHAASVESVETECGSAQAASADQPQRAEPEQPSNPT
AALSAASIMDELGLLEEAASILVTGQAYENLVTEIMSMGYEREQVISALRASFNNPDRAV
EYLLMGIPSESEQPVQEAVRPAAEIERPQPPPAATGATPSQAPPTSANPLEFLRNQPQFH
QMRQIIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPPAEEAEAAEAQAPPQ
TNYIQVTQQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQTFDDE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgatcacgctgaaaactctacaacagcaaacctttaagatacaaatagatgaa
gagctgacggtacgagctcttaaagagaagatcgaatctgaaaagggccaggatgcttat
cccatagctggacagaagctcatctatgcaggtaaaatcttgaatgatgacataccttta
aaagagtacaaaatagaggagaagaactttgttgtggtaatgataactaagccgaaatca
gcagcacttcctcctgtggttgctattcctctccctgacctttcacctgaggcccttcct
atacctgctcgccctccatctgccccagcagcccctgtacccatcccaagccccacatcc
acctctgcaactactgatgtatccacccctacaactgcccctgcacctatgatcacccct
acaactgtttctgcacccacgatcacccctacaactgcccctgcacccacagtcacctct
acaactgctcctgcacccacaatcactcctgcacctgcccctgccccagcacctgtaccc
acatccacccttactgaaccagtgcagtctgtggagcttccctctcctccagacaccgtg
ccctctgctgctgcccatgctgccagtgtggagtcagtggagacagagtgtggaagtgcc
caggctgcctctgcagatcagccgcagagagctgaaccagagcaaccatcaaaccctact
gcagctctctcagctgccagcattatggatgaactgggccttctggaggaagcagcatcg
atacttgtcacaggacaggcgtatgagaatttggtcacagagatcatgtccatgggatat
gagagggagcaggtcatttcggccttgcgagcgagcttcaacaatcctgaccgagcagtg
gaatacctgctcatgggtattccttctgagtccgagcagcctgtgcaggaagcagtgcga
ccagccgcagaaatagagagacctcaacctccaccagcagccactggtgccacaccctcc
caggccccacccacctcagctaaccccctggagttcctgaggaaccagccgcagttccat
caaatgcgtcagatcatccagcagaacccagcactcctccctgccttgctgcagcaactt
ggccgggacaaccctcagctcttgcagcaaatcacacagcaccaggagcggtttgtgcag
atgcttaatgagccgccggccgaagaagcagaggcagctgaggcacaggcacctccacaa
actaactacatccaggtcacacagcaggagaaagaggccattgagaggttaaaagctttg
ggtttccctgagggactagtcattcaggcttattttgcctgtgaaaaaaatgaaaaccta
gccgccaacttcctgcttcagcagaccttcgacgacgagtga
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