Tachysurus fulvidraco (yellow catfish): 113651131
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Entry
113651131 CDS
T08119
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113651131 (samd4a)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113651131 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
113651131
NCBI-ProteinID:
XP_027015611
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All DBs
Position
12:complement(3267614..3320663)
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AA seq
694 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELHILEV
EANNPAVIGQWQVEPKERLISLVLTHLPLLKPGNGEAKSEYMRLLPKILTHTIEFGRHLE
ESRQLLSYALIHPATSLEDRADLALWLNHLEERAATRTAGGGGDSLERVPSSHHLYAQHQ
RYGSDDRLNGWQGSRDSGIATWHTQQQQQGCENGHLLLYPSSSVPSTINTVGTGSGSNSI
LQSAGQHSPLKRSVSLTPPMSGSSTHPLGHGWLSQEDLRGRGAPLTPDHAPLSPQSSVAS
SGSGGSEHLEDGSGLGMALRSSFSEEGSGMRDVPAWLKSLRLHKYAGLFSTMTYEEMMSL
TEQQLEAQSVTKGARHKIIISIQKLRERQNMLRCLEKDVLEGGNLRSPLQELHYIIGTPI
KAFNSASESPQRPLLSAEGKSTATGVCVSGGEAESSTTLVAEGDIPAQFTRVMGKVCTQL
LVSRPDEENISSYLQLINKCELHEAFTETQKKRLSSWRQQVQKLVRSFPRKPLLDMTGYR
QQRSSRGFGQSNSLPSAVCVGSSVCSRRNLRQFPVPSRSLPAPRLGLLGTTGLLTHTHTP
RSSNNTPTNLKQGRQGLWFANPGGSNSMPSRTHSSVQRTRSLPVHTNPHTMAMFQQADLQ
VPVTEPDINNRLESLCRSMTEHALEDGVDRTSTI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgaccaggtgggcgtcttggccagctggtttaagggctggaacgaatgt
gagcagaccgtggctctgctgtcactgttgaagcgggtgagtcggacccaggctcggttc
ctgcagctctgtctggagcattcattagccgagtgtacggagctgcacattcttgaagtc
gaagccaacaacccagcggtgattggccagtggcaggtcgagccaaaagagcgtctcatc
tctttggtcctgacccacctgcctctccttaagcccggtaacggtgaagcgaagagcgag
tacatgcggttacttcccaaaatcctcacgcacaccatcgagtttgggcggcacctcgag
gagagcaggcagctgctctcgtacgcactcatccacccggccacatctctggaggaccgg
gctgatctcgctctctggctcaaccatctggaggaacgggcagccactcgcactgctggt
ggaggaggagattcactggagagagtgccttcttctcatcacctctacgcccagcatcag
cgttacggctctgatgatcgcctcaacggctggcagggatccagagactcgggcattgcc
acctggcacacacaacaacaacagcagggctgtgagaatgggcatctccttctatatcca
tcatcatcagtcccttccaccatcaatacagtgggcacaggaagtggaagcaactccatc
ctgcagtctgcgggtcagcacagtcccttgaagcgctccgtctctctcactcccccgatg
agcggttcatccactcatcctctgggacacggctggctctcacaggaggacctgcgggga
aggggggcccctctcacccctgaccatgcccctctgtctcctcagagcagcgtggcgtcg
tcagggagcggcggcagcgaacacctagaggatggctcgggcctaggcatggcactccgg
agctctttcagtgaggaggggagcggcatgagggatgttccggcatggctgaagagtctt
cgtctgcacaagtacgccggtctgttctccactatgacctacgaggagatgatgtcactg
acggagcaacagctggaggcacagagcgttactaaaggagcacgacacaagatcatcatc
agcatccagaaactgagagagagacagaacatgctccgctgtctggaaaaggatgtgttg
gaaggcgggaatctgcgttctcctttgcaagagctccattatatcatcgggacgccaatt
aaagcgtttaacagtgcgtccgagtctccgcaacgccccctactgagcgctgagggaaag
agcacagccactggagtgtgtgtgagcggaggggaagccgagagcagcaccacactcgta
gcagagggggacattccggctcagttcacacgcgtcatgggcaaagtgtgcacacagttg
ctggtgtctcggccggatgaggagaacatcagctcatatcttcagctcattaataagtgt
gaactccatgaggcgttcacagaaacacagaaaaagaggctgtcgtcatggaggcagcag
gtgcagaagctagtacgctcgtttccacggaaacctctcctggacatgactggataccgt
cagcagaggagcagtcgaggttttggtcagtccaactcccttcctagtgctgtgtgtgtg
ggcagcagcgtgtgttcccggaggaacctgcggcagtttccggtgccatcgcggagtctt
cctgcaccccggctcggcctgctgggtaccaccggactgctcacacacacgcacacacca
cgcagttccaacaatacacccaccaacctgaagcagggcagacagggtctgtggtttgct
aatccaggcggcagtaacagcatgcccagtcgcacccacagttcagtgcagaggacacgc
tcgctacctgtccacaccaacccgcacaccatggccatgttccagcaggcagatctgcag
gttcctgtgacggagccagacatcaataatcgattggagtccctctgccgcagtatgact
gaacatgcactagaagatggtgtcgatcggacgtccactatctga
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