Tachysurus fulvidraco (yellow catfish): 113651228
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Entry
113651228 CDS
T08119
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein isoform X2
KO
K10896
fanconi anemia group M protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113651228 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113651228 (fancm)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
113651228 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113651228
NCBI-ProteinID:
XP_027015803
LinkDB
All DBs
Position
12:complement(4503058..4521342)
Genome browser
AA seq
1689 aa
AA seq
DB search
MSNANQKTLFQTWGSAVPKTLLSKDTGKKLPQKPRATTNSHVKVKVKTKDNAAPSLWAEV
GQVHQVSRQEQEMDEVDDDLILVAVYEAEKSLENQPDPSIQDSAAVCSEIPGFDSSSGQI
WIYPTNYPIRDYQLKISEAALFQNTLVCLPTGLGKTFIASVVMYNFYRWYPEGKIVFLAP
TKPLVAQQIEACYRVMGIPQEHMAELTGSTPAPQRRELWKSRRVFFLTPQVMVNDLSRNT
CPAPQIKCVVIDEAHKASGNHAYCQVVRELWNQTKQFRVLALSATPGADMKAVQQVISNL
LISHIELRSEESPDVQAHSHQRSVQKIVVPLGDALTGYQSRYLQVLERFTSRLTQTSVLN
QRDLRSLTKYQVILAREQFRRNPPSHLMGAQHGALEGDFALCISLYHGYELLQQMGLRSL
FFFTQNIMSGSKETSRARNELQRSPVFMDLYREMEALFLGPTKGPEEQYFYSHPKLQKLD
EVIEQHFSSWAQRSGSATGSGDKAESSRVMIFSSFRESVQEIAEMLNRHQPLVRVMTFMG
QASAGKGVRGFTQKEQLEVVRRFREGGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPIR
LVQRMGRTGRHRQGRIVVILASGREERIYNQSQSTRRSVNKCIMGNKQSFSLFPHNPRMI
PAGVTPTLRKMDITCGQFEAKESSRRSSNGRHSLSTRRLSLLNPDAQVDGVHGRVKEDGF
LTPDEEVEWLTTMKLAENETQPRLGRSSFLCFNTAPQQQEVCVNGPVRDLSLWEWRHWQN
QPHPIHKVDHSSRCLHFTAIMDLIDQMRQEEEEQSGCRYESEVRAYLHKEDVVGGVEDGT
LVKGLPQWKRSNPRLVGREARCSVLDTMDQAGPSARTLLKDKLSSESDGDAITEDFSVFQ
GNYDKDNADNVMQTDVNVHSETKLSKKDHDQLQSSPEHKKSLKTIPDTSLEPLEDMFYLP
EGEVCQNLYGVNQSAGSLEMILSNVKHLLSRSPPESFDLHCSLNLNEPAHFDESDEICSS
LREEVEHFQVNFDLEGHENSLDSLDCNIDLAPPESEVLPSENVTAGPDSTANSPSWDDVF
DDDVDDGGDENTNLQLEAKIQPTSLDESVDLFGDDDDAFLQISLPNVVTPKKDTVIPINR
QDTDQSKRVVQNVAYTSNMFNAEASSKSSVGLGQKPPSAKTSDAFNYSQDIFSVNFDLGF
SIDSEEEEIAEPASDLTTEPAADRENTFTSLSVNKPNTSSNNFTVGHMSTPRVWPMDKKL
PSLIAKSNLSPIITERESLIRPNTSSPTLEFVSTKDRNLELFPKGLSSQAQPRGTGNRLC
RRSLLDARKPVYEAHACSEHVNSDSEEESAVRKPGNRGRANPLASPEQSKISDVESPVQV
PRKRVARLNMSEESDREAVSDDDFQQNSFCRPRAFQPRKPSRPLKEKSKKAVHSAGRQFL
DEEAELSEDGDSVSSDECGGEELDKSLEGFVVDSTQLSQGINDSEMHGIYLKSVKSPAIT
SKFKMMHRPVHNMNIFSQVPEQDETYEEDSFVVNGSEVEEDFGSASDEEEEAGLKMVPED
SYVDGRRQYATRRRVHLRQTRTAGETRSLQSRKAKRSRIVRVKDSSEEEDEKDEKQRKMP
HTEKASDLDGSAGTGFTTSSLSGGVKSRQETVQHKQERFNNQTLLSEQLDFEEPLSTSCV
KTQAVVPLL
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgcaaatcaaaagactttatttcagacatggggttcagctgttcctaagacc
cttttgagtaaagatactggaaaaaagttaccccagaagcccagagcaactacaaacagc
catgtgaaggtaaaggtaaagacaaaggacaatgcagcaccttcactttgggctgaggtt
ggccaagtccatcaagtatcaaggcaggaacaggagatggacgaagttgatgacgatctg
atcctcgtagctgtatacgaggctgaaaaaagtctggaaaaccaacctgatccctcgatc
caggattctgcagcagtttgctctgaaattccaggtttcgacagttcctcaggacagata
tggatctatcccaccaactatcctatcagagattatcagctgaagatctcggaagcagcc
ctgttccaaaacacgctagtgtgcttacccacgggcctggggaaaaccttcatagcgtca
gtggtgatgtataacttctaccggtggtatccggaagggaagatagtcttcctggctccc
acgaagccgttggtcgctcagcagattgaagcctgttacagagtgatggggattcctcag
gagcacatggctgaactgacagggagcactccggctccacagaggagggagctgtggaaa
tccaggcgcgtgttcttcctcacgccgcaggtcatggtgaacgatttgtctcgaaacacg
tgtcctgctcctcagatcaagtgtgtagttatcgatgaagctcacaaagcatcagggaat
catgcgtattgtcaggtcgtgcgggaattatggaaccagacgaaacagttccgtgtcctg
gctctcagtgctacacctggtgcagacatgaaggctgtacagcaagttatctccaacctg
ctgatctctcacattgagctgcgctctgaggagagtccagacgttcaggcgcactcccat
cagcgcagtgttcagaagatcgttgttcctttaggagacgcactcactggataccagtct
cgatacttacaggttttggaaaggtttacctcccggctgacgcagacgagcgtgcttaac
caacgtgaccttcgctccctcacaaagtaccaggtcattctggcacgagagcaattcaga
cgcaaccctccatcgcatctcatgggagcacagcacggtgcactggagggggatttcgct
ctgtgtattagcctctaccatggttatgagcttctgcagcagatgggcctgagatctctc
ttctttttcacacagaacattatgtcaggctctaaagagacttcacgggcccgaaatgag
ctccagcgcagccctgtctttatggacctgtacagggaaatggaggctttgtttctcggc
cctaccaaagggcccgaggagcagtatttctacagccaccccaaacttcagaaactggac
gaggtgattgaacaacatttcagtagctgggcgcagagatcaggcagtgctaccggctcc
ggggacaaagcagagagttcaagagtgatgatcttctcatcctttcgtgagagcgtgcag
gagatcgcagagatgcttaatcgccaccagcccctcgtcagggtcatgacatttatgggg
caagcgtcagctgggaaaggggtgcgagggttcactcagaaggaacagctcgaggtggtg
cggagattccgagagggcggctttaacaccttggtttctacttgtgttggtgaagagggt
ctcgacattggagaggtagacctaatagtctgcttcgatgctcagaaaagtcctatccgt
ctggtgcagcgaatgggccgaaccgggcgccacaggcagggacgcatagtggtcattctg
gcttcagggagagaggagcggatctataaccagagccagagtacccggcgcagtgtgaat
aaatgcatcatgggaaacaagcagagcttctccttgtttccccacaatccccgcatgatt
cctgctggtgtcactcccaccctgcgcaagatggacataacatgtggccaattcgaggcc
aaagagagcagcaggcgttccagcaatggccgccattcactcagcacgaggaggctgtct
cttctcaaccctgatgcccaagtggatggtgtgcatgggcgtgtgaaggaggatggcttt
ctcacccctgatgaagaggttgagtggttaactactatgaaattggctgagaatgaaacc
cagcccagactcgggcgctcttcgttcctgtgctttaacacggcgccacaacagcaggag
gtgtgtgtgaatggcccagtgagagacttgtctctttgggaatggagacactggcagaat
cagcctcatccaatacacaaagtggaccactccagccgctgcctccatttcaccgccatc
atggatctcattgaccagatgagacaggaggaggaggagcagagtggctgcagatatgaa
tctgaggtccgagcatatctacataaggaggatgttgttggtggtgttgaggatggcaca
ctagtaaaaggtcttcctcagtggaaaagatctaaccctagacttgttggtcgagaagcc
agatgttctgtcttggatacgatggaccaagcaggaccttctgcaaggactttattaaaa
gacaaactgtcctctgagtcggacggtgatgctattacagaagattttagtgtgtttcag
ggcaactatgataaagataatgctgataatgttatgcagactgatgtaaatgtgcactct
gagactaaactctccaagaaagatcatgaccagctacaaagttctcctgaacataaaaag
agtcttaagacaatccctgatacttccctcgagccccttgaggatatgttctatttacct
gaaggggaggtctgtcaaaatctctacggtgtcaatcagtctgctggaagtttggaaatg
attctctccaatgtcaaacatcttctgtctagatctccacctgaaagttttgatctacat
tgctcattaaacctcaatgaacctgctcactttgatgaatcggatgagatctgcagtagt
ctcagggaagaggttgaacatttccaggtcaattttgatcttgaaggacatgagaattca
ttggattctctggactgtaacatagacttagcccctcctgaatctgaggtgttgcctagc
gagaacgtcactgctggtccggacagtaccgccaacagtcctagctgggacgatgttttt
gatgacgacgttgatgatgggggagatgaaaacactaatctacaattggaggctaaaatt
cagcccactagcttagatgaaagtgttgacttgtttggtgatgatgatgatgctttcctt
caaatatcattaccaaatgttgttactcctaaaaaagacactgtaattcccatcaacagg
caggacactgaccaaagtaagcgggttgtgcaaaatgtagcgtatacatcaaatatgttt
aatgctgaagcatcttccaagagctcagtagggttaggacaaaaaccaccatcggcgaag
acatctgatgctttcaattattctcaggacattttttctgtgaactttgaccttgggttt
tccatagactctgaagaggaggaaatcgcagaaccagcctctgacttgaccacagaacct
gctgctgaccgagagaacaccttcacctccctaagcgtgaacaaacctaatacatcttcc
aacaacttcactgttgggcatatgtcaaccccgagggtgtggccaatggacaagaagctt
ccttctctcatagccaagagtaacctgtcacctataatcacagagcgagagagcctgatt
agaccaaacacttcttctccaactctggaatttgtgtctaccaaagacagaaatctagaa
ctctttcctaaaggtttgagctcacaagcacagccacgtggaacagggaacaggttgtgt
cggaggtctctgcttgatgcacggaaacctgtttatgaagcccatgcttgttcagaacat
gtgaacagtgacagtgaagaggaatcagccgttagaaaaccaggcaatcgtggaagagca
aatcctctggcatctcctgagcaatcaaaaatcagcgatgttgagtctcctgtccaggtg
cctagaaaacgtgtcgctcgattgaatatgtccgaggagagcgacagggaagctgtgtca
gacgatgacttccagcaaaactcgttttgtcggccccgagcgtttcagcctcgtaaaccc
tcacgtcctcttaaggagaaatctaagaaggcagtgcacagcgctggcaggcagttcctg
gatgaagaggcagagctgtctgaagacggagactcggtctcttctgacgaatgtggcgga
gaagaactggacaagtctttggaaggttttgtagtggattccactcagttgtcccaaggc
attaatgattctgagatgcatggaatttatctgaaatctgtgaagagtcctgcaattaca
agcaaatttaaaatgatgcacaggcctgtgcataacatgaacatcttctcacaggtccct
gagcaggacgagacgtacgaagaggacagttttgtcgtcaacggcagcgaggtcgaggaa
gactttggtagcgcttctgatgaggaagaggaggctggactcaagatggtccccgaagac
tcgtacgtagatgggagacgacagtatgccacacgtcgcagagtccatctcagacaaacc
aggactgccggagagacgagaagcctccaatccagaaaagccaaacgctccagaatcgtc
cgagtgaaggattcgagtgaagaggaagatgaaaaggatgagaagcagaggaagatgccg
cacactgagaaggcgtccgatttagatggttcagctgggacaggttttactacatcgtct
ctgtctggtggagtgaagagcagacaggaaactgtgcagcacaaacaggagagatttaat
aaccagacccttctgtctgaacagctggactttgaggaacctctgtccacctcttgtgtt
aaaacacaggctgtagtaccacttctctga
DBGET
integrated database retrieval system