KEGG   Tachysurus fulvidraco (yellow catfish): 113651228
Entry
113651228         CDS       T08119                                 
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein isoform X2
  KO
K10896  fanconi anemia group M protein
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    113651228 (fancm)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113651228 (fancm)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     113651228 (fancm)
SSDB
Motif
Pfam: FANCM-MHF_bd DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-GeneID: 113651228
NCBI-ProteinID: XP_027015803
LinkDB
Position
12:complement(4503058..4521342)
AA seq 1689 aa
MSNANQKTLFQTWGSAVPKTLLSKDTGKKLPQKPRATTNSHVKVKVKTKDNAAPSLWAEV
GQVHQVSRQEQEMDEVDDDLILVAVYEAEKSLENQPDPSIQDSAAVCSEIPGFDSSSGQI
WIYPTNYPIRDYQLKISEAALFQNTLVCLPTGLGKTFIASVVMYNFYRWYPEGKIVFLAP
TKPLVAQQIEACYRVMGIPQEHMAELTGSTPAPQRRELWKSRRVFFLTPQVMVNDLSRNT
CPAPQIKCVVIDEAHKASGNHAYCQVVRELWNQTKQFRVLALSATPGADMKAVQQVISNL
LISHIELRSEESPDVQAHSHQRSVQKIVVPLGDALTGYQSRYLQVLERFTSRLTQTSVLN
QRDLRSLTKYQVILAREQFRRNPPSHLMGAQHGALEGDFALCISLYHGYELLQQMGLRSL
FFFTQNIMSGSKETSRARNELQRSPVFMDLYREMEALFLGPTKGPEEQYFYSHPKLQKLD
EVIEQHFSSWAQRSGSATGSGDKAESSRVMIFSSFRESVQEIAEMLNRHQPLVRVMTFMG
QASAGKGVRGFTQKEQLEVVRRFREGGFNTLVSTCVGEEGLDIGEVDLIVCFDAQKSPIR
LVQRMGRTGRHRQGRIVVILASGREERIYNQSQSTRRSVNKCIMGNKQSFSLFPHNPRMI
PAGVTPTLRKMDITCGQFEAKESSRRSSNGRHSLSTRRLSLLNPDAQVDGVHGRVKEDGF
LTPDEEVEWLTTMKLAENETQPRLGRSSFLCFNTAPQQQEVCVNGPVRDLSLWEWRHWQN
QPHPIHKVDHSSRCLHFTAIMDLIDQMRQEEEEQSGCRYESEVRAYLHKEDVVGGVEDGT
LVKGLPQWKRSNPRLVGREARCSVLDTMDQAGPSARTLLKDKLSSESDGDAITEDFSVFQ
GNYDKDNADNVMQTDVNVHSETKLSKKDHDQLQSSPEHKKSLKTIPDTSLEPLEDMFYLP
EGEVCQNLYGVNQSAGSLEMILSNVKHLLSRSPPESFDLHCSLNLNEPAHFDESDEICSS
LREEVEHFQVNFDLEGHENSLDSLDCNIDLAPPESEVLPSENVTAGPDSTANSPSWDDVF
DDDVDDGGDENTNLQLEAKIQPTSLDESVDLFGDDDDAFLQISLPNVVTPKKDTVIPINR
QDTDQSKRVVQNVAYTSNMFNAEASSKSSVGLGQKPPSAKTSDAFNYSQDIFSVNFDLGF
SIDSEEEEIAEPASDLTTEPAADRENTFTSLSVNKPNTSSNNFTVGHMSTPRVWPMDKKL
PSLIAKSNLSPIITERESLIRPNTSSPTLEFVSTKDRNLELFPKGLSSQAQPRGTGNRLC
RRSLLDARKPVYEAHACSEHVNSDSEEESAVRKPGNRGRANPLASPEQSKISDVESPVQV
PRKRVARLNMSEESDREAVSDDDFQQNSFCRPRAFQPRKPSRPLKEKSKKAVHSAGRQFL
DEEAELSEDGDSVSSDECGGEELDKSLEGFVVDSTQLSQGINDSEMHGIYLKSVKSPAIT
SKFKMMHRPVHNMNIFSQVPEQDETYEEDSFVVNGSEVEEDFGSASDEEEEAGLKMVPED
SYVDGRRQYATRRRVHLRQTRTAGETRSLQSRKAKRSRIVRVKDSSEEEDEKDEKQRKMP
HTEKASDLDGSAGTGFTTSSLSGGVKSRQETVQHKQERFNNQTLLSEQLDFEEPLSTSCV
KTQAVVPLL
NT seq 5070 nt   +upstreamnt  +downstreamnt
atgagcaatgcaaatcaaaagactttatttcagacatggggttcagctgttcctaagacc
cttttgagtaaagatactggaaaaaagttaccccagaagcccagagcaactacaaacagc
catgtgaaggtaaaggtaaagacaaaggacaatgcagcaccttcactttgggctgaggtt
ggccaagtccatcaagtatcaaggcaggaacaggagatggacgaagttgatgacgatctg
atcctcgtagctgtatacgaggctgaaaaaagtctggaaaaccaacctgatccctcgatc
caggattctgcagcagtttgctctgaaattccaggtttcgacagttcctcaggacagata
tggatctatcccaccaactatcctatcagagattatcagctgaagatctcggaagcagcc
ctgttccaaaacacgctagtgtgcttacccacgggcctggggaaaaccttcatagcgtca
gtggtgatgtataacttctaccggtggtatccggaagggaagatagtcttcctggctccc
acgaagccgttggtcgctcagcagattgaagcctgttacagagtgatggggattcctcag
gagcacatggctgaactgacagggagcactccggctccacagaggagggagctgtggaaa
tccaggcgcgtgttcttcctcacgccgcaggtcatggtgaacgatttgtctcgaaacacg
tgtcctgctcctcagatcaagtgtgtagttatcgatgaagctcacaaagcatcagggaat
catgcgtattgtcaggtcgtgcgggaattatggaaccagacgaaacagttccgtgtcctg
gctctcagtgctacacctggtgcagacatgaaggctgtacagcaagttatctccaacctg
ctgatctctcacattgagctgcgctctgaggagagtccagacgttcaggcgcactcccat
cagcgcagtgttcagaagatcgttgttcctttaggagacgcactcactggataccagtct
cgatacttacaggttttggaaaggtttacctcccggctgacgcagacgagcgtgcttaac
caacgtgaccttcgctccctcacaaagtaccaggtcattctggcacgagagcaattcaga
cgcaaccctccatcgcatctcatgggagcacagcacggtgcactggagggggatttcgct
ctgtgtattagcctctaccatggttatgagcttctgcagcagatgggcctgagatctctc
ttctttttcacacagaacattatgtcaggctctaaagagacttcacgggcccgaaatgag
ctccagcgcagccctgtctttatggacctgtacagggaaatggaggctttgtttctcggc
cctaccaaagggcccgaggagcagtatttctacagccaccccaaacttcagaaactggac
gaggtgattgaacaacatttcagtagctgggcgcagagatcaggcagtgctaccggctcc
ggggacaaagcagagagttcaagagtgatgatcttctcatcctttcgtgagagcgtgcag
gagatcgcagagatgcttaatcgccaccagcccctcgtcagggtcatgacatttatgggg
caagcgtcagctgggaaaggggtgcgagggttcactcagaaggaacagctcgaggtggtg
cggagattccgagagggcggctttaacaccttggtttctacttgtgttggtgaagagggt
ctcgacattggagaggtagacctaatagtctgcttcgatgctcagaaaagtcctatccgt
ctggtgcagcgaatgggccgaaccgggcgccacaggcagggacgcatagtggtcattctg
gcttcagggagagaggagcggatctataaccagagccagagtacccggcgcagtgtgaat
aaatgcatcatgggaaacaagcagagcttctccttgtttccccacaatccccgcatgatt
cctgctggtgtcactcccaccctgcgcaagatggacataacatgtggccaattcgaggcc
aaagagagcagcaggcgttccagcaatggccgccattcactcagcacgaggaggctgtct
cttctcaaccctgatgcccaagtggatggtgtgcatgggcgtgtgaaggaggatggcttt
ctcacccctgatgaagaggttgagtggttaactactatgaaattggctgagaatgaaacc
cagcccagactcgggcgctcttcgttcctgtgctttaacacggcgccacaacagcaggag
gtgtgtgtgaatggcccagtgagagacttgtctctttgggaatggagacactggcagaat
cagcctcatccaatacacaaagtggaccactccagccgctgcctccatttcaccgccatc
atggatctcattgaccagatgagacaggaggaggaggagcagagtggctgcagatatgaa
tctgaggtccgagcatatctacataaggaggatgttgttggtggtgttgaggatggcaca
ctagtaaaaggtcttcctcagtggaaaagatctaaccctagacttgttggtcgagaagcc
agatgttctgtcttggatacgatggaccaagcaggaccttctgcaaggactttattaaaa
gacaaactgtcctctgagtcggacggtgatgctattacagaagattttagtgtgtttcag
ggcaactatgataaagataatgctgataatgttatgcagactgatgtaaatgtgcactct
gagactaaactctccaagaaagatcatgaccagctacaaagttctcctgaacataaaaag
agtcttaagacaatccctgatacttccctcgagccccttgaggatatgttctatttacct
gaaggggaggtctgtcaaaatctctacggtgtcaatcagtctgctggaagtttggaaatg
attctctccaatgtcaaacatcttctgtctagatctccacctgaaagttttgatctacat
tgctcattaaacctcaatgaacctgctcactttgatgaatcggatgagatctgcagtagt
ctcagggaagaggttgaacatttccaggtcaattttgatcttgaaggacatgagaattca
ttggattctctggactgtaacatagacttagcccctcctgaatctgaggtgttgcctagc
gagaacgtcactgctggtccggacagtaccgccaacagtcctagctgggacgatgttttt
gatgacgacgttgatgatgggggagatgaaaacactaatctacaattggaggctaaaatt
cagcccactagcttagatgaaagtgttgacttgtttggtgatgatgatgatgctttcctt
caaatatcattaccaaatgttgttactcctaaaaaagacactgtaattcccatcaacagg
caggacactgaccaaagtaagcgggttgtgcaaaatgtagcgtatacatcaaatatgttt
aatgctgaagcatcttccaagagctcagtagggttaggacaaaaaccaccatcggcgaag
acatctgatgctttcaattattctcaggacattttttctgtgaactttgaccttgggttt
tccatagactctgaagaggaggaaatcgcagaaccagcctctgacttgaccacagaacct
gctgctgaccgagagaacaccttcacctccctaagcgtgaacaaacctaatacatcttcc
aacaacttcactgttgggcatatgtcaaccccgagggtgtggccaatggacaagaagctt
ccttctctcatagccaagagtaacctgtcacctataatcacagagcgagagagcctgatt
agaccaaacacttcttctccaactctggaatttgtgtctaccaaagacagaaatctagaa
ctctttcctaaaggtttgagctcacaagcacagccacgtggaacagggaacaggttgtgt
cggaggtctctgcttgatgcacggaaacctgtttatgaagcccatgcttgttcagaacat
gtgaacagtgacagtgaagaggaatcagccgttagaaaaccaggcaatcgtggaagagca
aatcctctggcatctcctgagcaatcaaaaatcagcgatgttgagtctcctgtccaggtg
cctagaaaacgtgtcgctcgattgaatatgtccgaggagagcgacagggaagctgtgtca
gacgatgacttccagcaaaactcgttttgtcggccccgagcgtttcagcctcgtaaaccc
tcacgtcctcttaaggagaaatctaagaaggcagtgcacagcgctggcaggcagttcctg
gatgaagaggcagagctgtctgaagacggagactcggtctcttctgacgaatgtggcgga
gaagaactggacaagtctttggaaggttttgtagtggattccactcagttgtcccaaggc
attaatgattctgagatgcatggaatttatctgaaatctgtgaagagtcctgcaattaca
agcaaatttaaaatgatgcacaggcctgtgcataacatgaacatcttctcacaggtccct
gagcaggacgagacgtacgaagaggacagttttgtcgtcaacggcagcgaggtcgaggaa
gactttggtagcgcttctgatgaggaagaggaggctggactcaagatggtccccgaagac
tcgtacgtagatgggagacgacagtatgccacacgtcgcagagtccatctcagacaaacc
aggactgccggagagacgagaagcctccaatccagaaaagccaaacgctccagaatcgtc
cgagtgaaggattcgagtgaagaggaagatgaaaaggatgagaagcagaggaagatgccg
cacactgagaaggcgtccgatttagatggttcagctgggacaggttttactacatcgtct
ctgtctggtggagtgaagagcagacaggaaactgtgcagcacaaacaggagagatttaat
aaccagacccttctgtctgaacagctggactttgaggaacctctgtccacctcttgtgtt
aaaacacaggctgtagtaccacttctctga

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