Tachysurus fulvidraco (yellow catfish): 113651247
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Entry
113651247 CDS
T08119
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113651247 (trpc1)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113651247 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
113651247
NCBI-ProteinID:
XP_047666807
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Position
3:complement(4624993..4656965)
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AA seq
799 aa
AA seq
DB search
MRVGLGVLSYPLPVLMAALYRGPHTASPRAHLALKDVREVQEVTSLDEKLFLLACEKGDY
YMVKKLLEEKCHGELNINCVDVLGKDAVTIAIENENLDILQLLLDHGWQTTDALLVAIDS
EVVGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLK
QDISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFEL
SADLKELSLVEVEFRTDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHKNKRGL
LEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTGLKLLTVLSVALL
WPLLSVCYLLGPRSRVGHIIHTPFVKFIIHSASYLTFLLLLNLYSLVYNEGKKNTMGPAL
EMIDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNHLSFIMNSLYLATFALKIVAHSKF
KNENTDRKFWDASHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGK
FLGLFLLVLFSFTIGLTQLYGKDKKDMFKSKYKNKDCEGIFCEQQSNDAFHSFMGTCYAL
FWYIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIAN
HEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTLCYLLTSLSKWICSHTSTGKMKRQ
NSLKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSMDQATVENLNDLRQDLSKFRNE
MRDLLGFRTSKYAMFYPRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcggcctcggcgtgctgtcgtatccactccccgtactgatggctgcgctgtac
cggggcccgcacaccgcctctccacgcgcccacctggcgctcaaggacgtccgggaggtt
caggaggtaacatcgctggatgagaagctcttcttgttggcctgcgagaagggtgattac
tacatggtgaagaagctgctagaggaaaaatgccatggcgagctgaatatcaactgtgtg
gacgtgcttgggaaggacgccgtcactatcgctatcgagaacgagaacctggacattctg
cagctgctcctggatcacggctggcagacgacagatgctcttttggtggccattgactct
gaggtagtgggagctgtcgatattctactcaaccaccggccaagacgatcctccaaacct
tccatcgctaaactgatgcagcggattcagaacccggaatattccaccaccatggacgtg
gcacccgtcatcctggctgctcaccggaacaactacgagatcctgaccatgctcctgaag
caggatatctcactgcccagacctcatgccgtgggctgcgagtgtactctctgcaacgcc
aagaacaagaaggacagcctgcgtcactccaggtttcgtctggacatctatcgatgccta
gcgagtccatcgctcatcatgctgacagaggaggatccgattctgagagcgtttgagctt
agcgctgacctcaaggagctcagcctagtggaggtggagttcaggacagattatgaagaa
ctagccaagcagtgcaagatgtttgccaaggatttgttagcacaggcacgaaactcccgt
gagcttgaagtcatcctgaaccacacgagcaacgaggatcacaagaataagagaggactg
ctggaggagcgcatgaacctcagccgactcaaactcgccatcaaatacaaccagaaagag
tttgtggctcagtctaactgtcagcagttcctgaacacggtgtggtttggtgagatggcg
agttaccgtcgtaagcacacggggctgaagctgctgacggtgctgagcgtggctcttctg
tggcctctgctctccgtgtgctacctgctcggtccacgctcacgcgtcggtcacatcatc
cacacgcccttcgtaaagttcatcatccacagtgcttcgtacctcaccttcctcctcctg
ctcaacctctactcgctggtctacaacgagggcaaaaagaacaccatgggcccggcgctg
gagatgattgattacctgcttatcctctggatcatagggatggtgtggtcagatgtaaag
cggctgtggtacgagggtttggaggatttcctggaggaatcgaggaaccatctgagtttt
attatgaactctctgtacctcgccaccttcgcacttaaaatagtggctcacagcaagttc
aaaaacgagaatactgaccggaaattctgggacgcgtctcaccccatcctggtggccgag
ggacttttcgcctttgctaacgtcttgagctacctgcgtctcttcttcatgtacactacc
agctccatcctcggccctctacagatctctatgggtcagatgctgcaggagtttggaaag
ttcctaggcctgttcctcctggtgcttttctccttcaccatcggcttgacgcagctttac
ggaaaagacaagaaggatatgttcaagagcaaatacaaaaacaaggactgcgaaggaatc
ttctgtgaacagcagagcaacgacgccttccactcatttatggggacgtgttatgcactc
ttctggtatatcttttctctggcccacgtggcgctcttcgtgactaggatcagctacaca
gaggaactgcgctcgttcgtaggcgccctcatcgtcggcacgtacaacatcgtcgtcgtg
atcgtcctcaccaagctcctagtggccatgctgcataagagcttcagacagatcgctaac
catgaggataaagaatggaaattcgcccgggctaaactctggctcagctactttgatgat
aaatgcacgttgcctcctccgtttaacatccttccatctccgaaaacgctgtgctattta
ctgaccagcctgagcaagtggatctgttcccacacgtccactggaaagatgaagagacag
aacagcctcaaggagtggagaaacctgaagcagaaaagggatgaaaactaccagaagatc
atgtgctgcctggtacatcgttacctgacctccacacggcagaagatgcagagcatggac
caggccacggtggagaacctcaatgacctgaggcaggacctgtccaagttccgcaacgag
atgagagacctgctcggctttcgcacatccaaatatgccatgttttaccccagaagctaa
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