Tachysurus fulvidraco (yellow catfish): 113652103
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Entry
113652103 CDS
T08119
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tfd04054
]
113652103 (nlrc3)
Pattern recognition receptors [BR:
tfd04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113652103 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
LRR_8
SpoU_sub_bind
AAA_16
CARD
Viral_helicase1
PAN_2
AAA_22
Turandot
Motif
Other DBs
NCBI-GeneID:
113652103
NCBI-ProteinID:
XP_027016817
LinkDB
All DBs
Position
3:31510352..31524064
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AA seq
1143 aa
AA seq
DB search
MNTYGKYTGMERTSQIPWQDDCYMVLKSTPKSGNRKKMEDAGWLRKNKKSLQRFITGPLL
MDIVNHMRKSDELSAEGAGIIKEAGSTEDKVHALVELLFRGDTQGNGLQEYLKNSHPDEY
NLITLHDSVVQQHKDKLQQQVRNDDEIPSHKASNQTPDLLLVDGVSDLQQREHDLIQVSV
NRGVGPLHSRPLGLDKLFAALTRVSTAPRVTLTVGVAGSGKTRLVRKFVHQWCSGKVFPE
FSLAIPIVCWELSSQDRMSLEKLLRLIVPYDNVDMILNNCACKVLLIFDGLEEFRFPLDF
SEAPAASDPRRELPVSDLITNIIRGNLLPGASLWLLSRPGVGAKVPAGLVDRVTEVPAFL
HDQIENYIKNAPLPENFYTRFQQSTQSDCQTQTSEDKSCQAWAHLRSQKPLCILCSVPCI
CRIVTTTLCYLVRTDLENIHLPRTLTEVYTLYCWPHLSSTDPSGGSIRKPLSTLGRLAFY
SLLRQRHTFTETELRTYGVDIPPQPGSLGHRILQREQSWSSDSVSWQFVHTSIQEFLGAL
FYYVSSRRGMFDLFSESSVSWPRIGFQNHYRAALQKTSTSSNGKLDLFMRFLSGLLSSAA
GALLGGALGISREEQVTQRTMAMTLLQNTVTGSGDEPVSMRSVASVACLAELQQGEWIRS
VEEDLTSGRLRGKLKGGVCAVLAYLLQTSESCANETHLSNCLDSSSLKKLLPQLLYCSKL
RMENNRLTDDAMELLGSLLSAKDCHIQSLSMADSSISSKGIKPLSRALLVNRTLTVLDLH
GNNIGTKGAKTLAEALKMNQVIVSVNLQSNQMKDEGAHALAEVLQSNRKLATLNVQKNGI
GPEGVKRIAEALKKNQILQDLNVSGNHMGDLGALALAQALVVNRTLQTLSLRSNSVSDMG
MKALTQALRYNKALTKLNLRENSIGVEGALAIARALQENHTLRELDLTANLLHDKGVKAI
AAAVKVNRALTTLHLQWNFMKAGAAKALAQSLKDNTFVQVLDLQENALGDDGVVALADAL
KTNSTLLVLYLQGVSAGEAGAVALAEALTVNRSLHTLDLRGNSIGMGGAKALSGALKTNR
SLRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIRADAPECV
VDI
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctacggtaaatacactgggatggagaggacctctcaaattccttggcaggac
gactgctacatggttcttaaatccactccaaaatcaggaaatcgcaagaaaatggaggat
gccggttggttgcgtaagaataaaaagtcgttgcagcgtttcatcaccggtccgttactg
atggacatagtcaaccacatgaggaagtcggacgagcttagcgcagagggggcagggatt
atcaaggaagcgggatctacggaggataaagtccacgcgttggttgagctgctgttcaga
ggtgatacgcagggcaacggcctccaggaatacctgaagaactcgcatccggacgagtac
aacctcataactctgcacgactctgttgttcagcaacataaagacaaactccaacagcaa
gtcagaaacgacgatgagattccatcccacaaagcgtctaatcaaactcctgacctgtta
ttggtcgatggagtgtctgacctgcaacaaagagagcacgatctcattcaagtgtccgtc
aacagaggggtgggacctttgcacagtcgtccattgggactggataaactttttgcagcg
ctgacgagggtaagcacggcccctcgtgtcacactgacggtaggcgtggccggcagtggg
aaaactcgattggtccgcaaattcgtccatcagtggtgttcggggaaggtattcccagag
tttagcttggcaattcctattgtttgttgggaattgagcagtcaggaccggatgtcactc
gagaagttgcttcggttgatcgttccatacgataacgtcgacatgattttgaacaattgt
gcctgtaaagtgctgttgatcttcgatgggttggaagaattccgtttcccactggacttc
tcagaggccccggctgcctcggatccacgtcgagagcttccggtatctgatctcattaca
aacatcatcaggggcaacctcttaccaggtgcatcgctgtggcttttgtcgaggcctgga
gtcggggcaaaagtaccagcaggattagtggatcgtgtgacggaagtaccagcttttttg
cacgatcagattgagaattatatcaaaaatgcgcccttgccagagaacttttacacaaga
ttccagcagtccactcagtcggattgtcaaactcaaacatccgaggacaagtcttgccaa
gcatgggctcacctgagatcccagaaacccttgtgcattctttgttcggtgccttgcatc
tgtcgaattgtcacaaccaccttgtgctaccttgtaaggacggatttggaaaatatacat
ctaccacggacactgacggaggtatacaccctctactgttggccacatctctcttccaca
gatccatcaggtggaagcatccggaagccgctaagcactcttggacggttggcattttac
agtctgctgcgtcaacgccacacgtttaccgagactgaattacggacttatggtgtcgac
atcccaccacaaccaggatctctgggacaccggatccttcaacgtgagcagagctggtct
tctgactcagtatcatggcagtttgtacacacttctatacaggagttccttggcgcgctc
ttctactatgtgtcatcacggcgtgggatgtttgacctgttctccgagagcagcgtttca
tggccgaggatcggcttccaaaaccactaccgtgccgcactgcagaaaaccagcacctca
tccaatggcaaacttgacctcttcatgcgcttcctctccggccttttgtcctcagcggcc
ggagccttgttgggaggggctttgggaataagccgggaagagcaggtgacccagcgcaca
atggcaatgactctgcttcagaatacggtgaccggatcgggagacgagccggttagcatg
cgtagtgtagctagtgtagcttgcctggcagagttacagcagggcgagtggatacgctct
gtggaggaggatctgactagcggcagactacgagggaagcttaagggcggggtttgtgcg
gtactggcttatctgctgcagacgtcagagtcgtgtgccaacgagactcacctctcaaac
tgcctggactcgtcctctctcaagaaacttctcccacagctcctgtactgcagcaagttg
aggatggaaaataataggttgacggacgatgccatggagctcctgggaagtttgctaagt
gccaaagactgtcatattcaatcgttaagtatggcagatagctcgattagcagtaaaggg
atcaagccgctgagtcgagctcttctggtcaatcggaccctcactgtattggatctccat
ggcaacaatattggcaccaaaggggcgaagacgttggctgaggcgctgaagatgaaccag
gttattgtgtcagtcaatcttcaaagtaaccagatgaaggacgagggcgctcacgcactg
gccgaggttttgcagtcaaacagaaaactcgccacactaaatgttcagaagaacggcata
ggtccagaaggggtgaagaggatcgcagaagcactgaagaagaatcagattttacaagac
ctcaatgtatctggcaatcacatgggagatctgggtgcattagcattggctcaagctctt
gtggtcaaccgtacgcttcaaactctcagcctccggagtaactctgttagtgatatgggt
atgaaggctctgactcaggccctgcgctacaataaagccctcactaaactcaaccttagg
gagaactccataggagtcgaaggtgctctcgccatcgcccgagctttacaagagaaccac
acactccgagaacttgatctcacagcaaatcttcttcacgataaaggtgtaaaggccatc
gcagctgcggttaaagtcaacagagctttgactaccttgcatctccagtggaacttcatg
aaagccggcgcagctaaagctctggctcagtccctaaaggacaacacattcgtccaggtc
ctagatcttcaagaaaatgcgctgggtgatgatggtgttgtcgccctggcagacgcccta
aagaccaactccactcttttagtgctctatcttcagggtgtatcagcaggtgaagcaggt
gctgtggccctggctgaagctctgacagtcaaccgaagcctccacactctcgatctccgt
ggtaactccatcggcatgggcggggccaaggctctctccggagcgctgaagaccaatcgt
agtttgagaagtttgaatcttcaggagaactctttggggatggatggagccatcttcatc
gccacggcgctccgagggaatcatcagctcacgtatataaatcttcagggtaacggaatc
ggcgagtccggagctaaggtggtctcggacgctatacgagccgatgctccggagtgtgtg
gtggacatttga
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integrated database retrieval system
