KEGG   Tachysurus fulvidraco (yellow catfish): 113652213
Entry
113652213         CDS       T08119                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137  Mitophagy - animal
tfd04144  Endocytosis
tfd04145  Phagosome
tfd04148  Efferocytosis
tfd05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113652213 (rab5c)
   04145 Phagosome
    113652213 (rab5c)
   04137 Mitophagy - animal
    113652213 (rab5c)
   04148 Efferocytosis
    113652213 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    113652213 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tfd04131]
    113652213 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tfd04147]
    113652213 (rab5c)
   04031 GTP-binding proteins [BR:tfd04031]
    113652213 (rab5c)
Membrane trafficking [BR:tfd04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    113652213 (rab5c)
 Endosome - Lysosome transport
    113652213 (rab5c)
Exosome [BR:tfd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113652213 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   113652213 (rab5c)
  Exosomal proteins of colorectal cancer cells
   113652213 (rab5c)
  Exosomal proteins of bladder cancer cells
   113652213 (rab5c)
GTP-binding proteins [BR:tfd04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    113652213 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 113652213
NCBI-ProteinID: XP_027016947
LinkDB
Position
15:17911672..17928730
AA seq 222 aa
MAGRGGATRTNGTTAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF
LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKE
LQRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAI
AKKLPKNEPQGGAGPGGRARGGVDLQETAPQGRSGQCCGGGN
NT seq 669 nt   +upstreamnt  +downstreamnt
atggcagggcgaggaggagcgacgcggaccaacggcactaccgctgccgcagccaacaag
atctgccagttcaaactggtgctgctgggagagtcggccgtgggcaagtccagcctggta
ctgcgcttcgtcaagggccagtttcacgagtaccaggagagcaccattggagccgcattc
ctcacacagacagtctgcttagatgatacaacagtaaagtttgagatttgggacacagcc
ggacaagagagataccacagtctggctccaatgtactacagaggagcccaggctgccatt
gtagtctacgacatcactaacacagacactttcacccgagcaaagaactgggtaaaggag
ctccagagacaggccagccctaacatcgtcatcgctttggctgggaacaaagccgacctt
gctaacaagagagctgtggatttccaggaagcgcaggcgtacgcagacgacaacagcctg
ctgttcatggagacatccgctaagaccgccatgaatgtcaacgagatcttcatggccatc
gctaagaagcttccgaagaacgagccacagggcggagctggacccggaggacgggctcgg
ggcggagtcgacctgcaggagacggcacctcagggcagatccggccagtgctgcggagga
ggcaactaa

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