Tachysurus fulvidraco (yellow catfish): 113652213
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Entry
113652213 CDS
T08119
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
tfd04144
Endocytosis
tfd04145
Phagosome
tfd04148
Efferocytosis
tfd05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113652213 (rab5c)
04145 Phagosome
113652213 (rab5c)
04137 Mitophagy - animal
113652213 (rab5c)
04148 Efferocytosis
113652213 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113652213 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113652213 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113652213 (rab5c)
04031 GTP-binding proteins [BR:
tfd04031
]
113652213 (rab5c)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
113652213 (rab5c)
Endosome - Lysosome transport
113652213 (rab5c)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113652213 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
113652213 (rab5c)
Exosomal proteins of colorectal cancer cells
113652213 (rab5c)
Exosomal proteins of bladder cancer cells
113652213 (rab5c)
GTP-binding proteins [BR:
tfd04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
113652213 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
113652213
NCBI-ProteinID:
XP_027016947
LinkDB
All DBs
Position
15:17911672..17928730
Genome browser
AA seq
222 aa
AA seq
DB search
MAGRGGATRTNGTTAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAF
LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKE
LQRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAI
AKKLPKNEPQGGAGPGGRARGGVDLQETAPQGRSGQCCGGGN
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggaggagcgacgcggaccaacggcactaccgctgccgcagccaacaag
atctgccagttcaaactggtgctgctgggagagtcggccgtgggcaagtccagcctggta
ctgcgcttcgtcaagggccagtttcacgagtaccaggagagcaccattggagccgcattc
ctcacacagacagtctgcttagatgatacaacagtaaagtttgagatttgggacacagcc
ggacaagagagataccacagtctggctccaatgtactacagaggagcccaggctgccatt
gtagtctacgacatcactaacacagacactttcacccgagcaaagaactgggtaaaggag
ctccagagacaggccagccctaacatcgtcatcgctttggctgggaacaaagccgacctt
gctaacaagagagctgtggatttccaggaagcgcaggcgtacgcagacgacaacagcctg
ctgttcatggagacatccgctaagaccgccatgaatgtcaacgagatcttcatggccatc
gctaagaagcttccgaagaacgagccacagggcggagctggacccggaggacgggctcgg
ggcggagtcgacctgcaggagacggcacctcagggcagatccggccagtgctgcggagga
ggcaactaa
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