Tachysurus fulvidraco (yellow catfish): 113652302
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Entry
113652302 CDS
T08119
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04115
p53 signaling pathway
tfd04120
Ubiquitin mediated proteolysis
tfd04137
Mitophagy - animal
tfd04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113652302 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113652302 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113652302 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
113652302 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113652302 (siah1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113652302 (siah1)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113652302 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
113652302
NCBI-ProteinID:
XP_027017051
LinkDB
All DBs
Position
13:complement(16770109..16789052)
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AA seq
330 aa
AA seq
DB search
MSPTTRLQPVYSWKGVFKLFTCVAARTASKPKEVHTFQEKKIALLGNHMDEEMSRQTATA
LPTGTSKCPPSQRVNTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCC
PTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPG
ASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLV
LEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIM
NSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccaccactaggctacagcctgtctactcatggaagggggtgttcaagctcttc
acatgcgtagctgcccgaacggccagcaagcctaaagaggtccacacatttcaagagaag
aaaatagccttactggggaatcatatggacgaagaaatgagtcgccagactgccaccgcg
ctgcccacaggaacctcaaagtgccccccctctcagcgtgtgaacaccactgcctcaaac
agtgacctagccagcctgttcgagtgcccggtgtgttttgactatgtgctgcctccaatc
ctgcaatgccagagcggccatctggtgtgcagcaactgccggcccaagctgacgtgctgt
ccgacgtgccgtggcccgttgggctccatccgtaacctagccatggaaaaggtggccaac
tccgtgctatttccgtgcaagtacgcctcgtcgggctgcgaagtgacattgccacacacg
gacaaggccgagcacgaggagctgtgtgaattccggccgtactcctgcccatgtccgggt
gcttcgtgcaagtggcagggctcactggatgccgttatgccgcacctcctgcatcagcac
aagtccatcactacactgcagggcgaggacatcgtcttcctggccacggacatcaatctg
cctggtgccgtcgactgggtcatgatgcagtcttgcttcggtttccacttcatgctggtc
ctggagaagcaggagaagtatgatgggcaccagcagttctttgccatcgtgcaattgatt
ggcacacgcaagcaggcagagaactttgcctaccggctggagttgaatggccaccggcgg
cgccttacttgggaagccacaccacgatccatccatgagggcattgccacagccatcatg
aacagtgactgtctagtgttcgacacctccatcgcccagctgtttgctgaaaatggcaac
ctgggcattaatgtcaccatatccatgtgctga
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integrated database retrieval system
