Tachysurus fulvidraco (yellow catfish): 113652471
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Entry
113652471 CDS
T08119
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113652471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113652471
03036 Chromosome and associated proteins [BR:
tfd03036
]
113652471
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113652471
Coactivators
SAGA/TFTC/STAGA complex
113652471
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113652471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
113652471
NCBI-ProteinID:
XP_027017362
LinkDB
All DBs
Position
13:complement(23721784..23808582)
Genome browser
AA seq
1078 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGRSGNKACGAKQHIGKALCSRVTTTSE
QQQQQQQQHKAGTERGSHPAEITPAGTAASPESCVKASTSGSRSHSSSSSSSSSSSPSSS
VKISGVCAQDGAASLAASISDTGRRAASDPGSMETPRHYGTRKKRGGARSVNGAATSSVS
SNSPSSAGAAVSMAMARANSTTYTVSSTNKQVALDKGTPTIALHRLPSHIVASIAQGRNG
TSVSALIQQGRLNHGKNLERADDKSKAGLQQVQPESVNSVPSAMCNAVTQSQPQSQPQSQ
PQPQSQPQSKPQSQPQSKPQSQPQSKPQSQSQSKSQSQPQSQSQSQPQSQPQSKPQSQPQ
SQSQSKPQSQTQFQPQSTPQSKPQSKAQSQSQVVSQTQSQPQTQLPLPSKLQPQTQPQLQ
HQSTVQPQTKSQPQTQSQTQAQLQLQPQPRPAAPPQRITTPQLIVRPPQQQATIQLPPGF
TIPSGMVLVRTELGQLMMVPQQALAQAQAQSALSARPAAPTTTATFRVTTPQSPISVQAS
RVVPAVTNKVVQSQTLSPAPQTCTSTSSSSTTTTTTTTASATATTTTTTTPALTRPPLAV
AAPQQHPAALAPQGPTLAPPTAAGPAPGATVISQEMQENVKKCKNFLATLIKLASHNSPS
PETSRNVKSLVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQ
SLIQPLQPKTTASPTGAIAGAVTTGCSPRQPNSTVTPPQNIKRTGAIGGQVRMPVVITQT
VRTAGGVGKSPVVQAGKSPVAASVQLSGAQKNKVNDPGGGSFRDDDDINDVASMAGVNLS
EESARILATNSELVGTQIRSCKDEAFLPTGLLHRRILETAKKFGVTEVSLESVNFIAHAT
QTRLRTVLEKVSFIAQHRMDSCKDEEWHEQSSDVRTQLKFFEHLERLEKQRKDEQEREIL
LKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGAT
SGTEVSGSSAGSPASSLSSSRQFHRQRITRVNLRDFIFYLEQERETSRSLLLYRALLK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagatatgctgttctctgaggtggacgagaaggct
gtgagcgacctggtgggctcgctggagtcgcagctcgtcggcaggagcggaaacaaggct
tgtggcgcaaagcagcacataggaaaagcgttatgttcccgggttactactacatccgag
cagcagcagcagcaacaacaacaacataaagccgggacggagcgaggctcacatcctgct
gagatcaccccagcgggcacagcagcttctccggagagctgcgtgaaggcgagtacgagc
ggttcgcgttcacactcctcctcctcctcctcctcctcctcctcctcaccatcatcttcg
gtaaagattagtggcgtgtgcgcgcaggatggagccgcttctctcgcggctagcattagc
gacaccggccgcagagcagcatcagatccggggtccatggagacgccgcggcattacggt
acgcggaagaagcgcggtggcgcgcggagtgtgaacggcgctgcgacctcctccgtgagc
agcaactcgccgtccagcgccggggccgcggtttccatggcgatggcgcgcgccaactcc
actacgtacaccgtgtccagcacgaacaagcaagtcgctctggataaagggacacccacc
atcgcgctacaccgactaccgagtcacatcgtggccagcattgctcagggcaggaacggc
acgagtgtgtcggcgctcatccagcaagggcgcctgaaccacggcaagaacttagagcgc
gcagatgacaagagcaaagcaggtttgcagcaggttcagccagagagtgtgaactcggtc
ccgagtgctatgtgcaatgcggtgactcagtcccaacctcaatcccaacctcaatctcaa
ccccaacctcaatcccaacctcagtccaaacctcaatcccaacctcagtccaaacctcaa
tcccaacctcagtccaaacctcaatcccaatctcagtcaaaatctcaatcccaacctcaa
tcccaatctcaatcccaacctcaatcccaacctcagtccaaacctcaatctcaaccccaa
tcccaatctcagtccaaacctcaatcccagactcaattccaaccccaatccacacctcaa
tccaaacctcaatccaaagctcaatcccagtcccaagtagtatctcaaactcagtcccaa
cctcaaactcagcttccacttccctctaaactgcagcctcaaacacaaccacagctgcag
catcaatccacagttcaacctcaaacaaaatctcaacctcaaacccagtcccaaacccaa
gctcagcttcaactccaacctcagcctcgacctgcagcaccaccacagaggataacgact
cctcagctgatcgtcaggccgccacaacagcaggcgacgatccagcttccgccaggattt
accatcccgtcaggcatggtgttggtgcggacggagctgggtcagttaatgatggttcca
cagcaagcactggctcaagcacaggcccagagtgcactctcggcccgacctgctgccccc
acaaccacagccactttcagagtcactaccccacagtctcccatctcggtccaggcgtct
cgggttgttcctgctgtcacaaacaaagtggttcagtcccaaaccctgagtcctgctcct
cagacctgcacgtccacttcttcgtcttctaccactactactacaaccaccactgcttct
gctactgctactactactactactactactcctgcccttactaggccgcctttggcagtg
gcagcgccccagcagcaccctgcagctctggccccccaggggcccactctggctccaccc
accgcagctggccctgcccctggagcaactgttatctcccaggaaatgcaagagaatgtg
aaaaagtgtaagaacttcctggctacattgatcaaactcgcatcccataattccccttca
ccagagacgtcacggaacgtgaaatcactggtgcaggaccttctggatgccaaaatcgaa
ccagaggaattcaccagccggctgcagacggagctgaagtcatcgccacagccttatctg
gtgccttttctcaagaaaagcttgccagcattacgtttgtccctgctgaacagtcagcag
tcactcattcagcccctgcagcctaaaaccaccgcgtctccaacgggagccatcgccggg
gctgttaccacaggctgctccccccggcaacctaacagcacagttacaccaccacagaat
atcaagaggacaggggcaataggagggcaggttcggatgcccgtggtcatcacacagact
gtgcggacagcaggtggtgtagggaagagtccggtggtgcaggcgggaaaaagccccgta
gcagcaagcgtacagctctcaggggctcagaagaacaaagtgaacgaccctgggggaggc
tccttcagggacgacgatgacatcaacgatgttgcgtctatggccggggtaaacttgagt
gaggagagcgctcgtatcttagcaaccaactccgagctagtgggcacacagatccgctcg
tgtaaagacgaggccttcctgcccacgggtttactgcatcgacgcatactggagacggct
aagaaattcggcgtgacggaggtttctctggagtcggtgaacttcatcgctcacgccaca
cagacacggctgaggacggtgctggagaaagtgtccttcatcgcccagcatcggatggac
tcctgcaaggatgaggagtggcacgagcagtcatcagacgtccgaacccagctcaaattc
ttcgagcatttggagcggctggagaaacaaaggaaagacgagcaggagagagaaattctc
ctcaaagcagccaaaagtcgctcgaggcaggaggacccagagcaggctcgtttgaagcag
aaggcaaaagagatgcagcagcaggaactggcccagatgaggcagagggatgcgaacctc
acagctctcgccgccatcggacctcggaaaaaacgcaaagtggactcacctggagcgact
tcaggcaccgaggtgtcagggagctccgcgggttctccagcttcttcgttgtcgtcctca
cgccagttccaccggcagcgaattacacgtgtgaacctcagggacttcatattctatctg
gagcaggagcgagagacgagtcgatctctcctgctctaccgcgctctgctgaagtag
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integrated database retrieval system
