Tachysurus fulvidraco (yellow catfish): 113652473
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Entry
113652473 CDS
T08119
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113652473 (ctcf)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113652473 (ctcf)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113652473 (ctcf)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113652473 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_ZN142
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
DTHCT
Motif
Other DBs
NCBI-GeneID:
113652473
NCBI-ProteinID:
XP_027017365
LinkDB
All DBs
Position
13:complement(14861957..14869414)
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AA seq
803 aa
AA seq
DB search
MEGGPSEAVVDETGDAFKAKDCKTYQRRREDEEVEADLLQAAGLEAVDQSVAEGEVTDAV
VDAQQQLVEGVVSVNSGVEMMVMDSLDPTLLQMKTVEGTMATAVGVAGAAHEATVTTVDD
TQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTATTVEELQGTLVDATAMPKDGEPVIC
HTLPLPEGFQVVKVGANGEVETVEQEELHGHEEQSLQQEEEEIPESQNDDPTWAKDPDYT
PPVKKTKKTKKSKLRYNTEGEKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKI
KKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHT
GTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGER
PFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKF
HCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCEAVFHERYALIQHQKSHKNEKRFKC
DQCDYACRQERHMVMHKRTHTGEKPYACSHCEKTFRQKQLLDMHFRRYHDPNFVPTSFVC
SKCGKTFTRRNTMARHADNCTGLEGGDGENGAPTKRGRGGRKRKMRSRKDDDDDDSDDQA
EPDLDDIDEEDEEEEDVLDDMEMEVEQAPPTVPVPAPAEPPVKRKRGRPPKNPPKPPPAK
NTAIAPTATAIIQVKDEGTGAIENIIVKKEQDGVDSSVVASAEPVVEEVEATEGEVEAEQ
LSVPEAAPNGDLTPEMILSMMDR
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggaccgtctgaagccgtagtggacgagacaggggacgccttcaaggccaag
gattgtaagacatatcaacgacgacgtgaggatgaagaggttgaagccgatctactgcag
gccgctggtctagaggcagtagatcagtctgtagctgagggtgaggtgaccgatgcagtg
gttgatgcacagcagcagctggttgaaggtgtggtgagcgtaaatagtggtgtagaaatg
atggtgatggattccctagacccaacgctgctgcagatgaagacagtggagggtaccatg
gccactgctgtgggtgttgctggagcagcccacgaggccacggtcaccacagtagatgac
acacagatcatcaccctgcaggtagtcaatatggaggaacaacaacttggtctgggtgaa
ctgcaactagtgcaggtgcctgtttctgctgtgcctgtcactgccaccaccgtggaagag
ttgcagggaacattggtggatgctactgccatgcctaaagatggagagcctgtcatctgt
catacactgccactcccagagggcttccaggtcgtgaaagtaggtgccaacggtgaagtg
gagactgtggagcaggaagagctccatggccatgaagagcagtctttgcagcaggaagag
gaggagattcctgaatcccagaatgatgatcctacttgggccaaggatcctgactacaca
cctcctgtcaaaaagaccaaaaagacaaagaaaagcaagctgcgttataacacagaggga
gagaaggacatggatgtgtctgtttacgactttgaggaggaacagcaagaaggcctgctc
tcggaggttaatgcagagaaggttgttggcaacatgaagcctccaaaaccaaccaaaatc
aaaaagaaaggtgtgaagaagacattccagtgtgagttgtgtagctacacctgcccaaga
cgctcaaacctcgaccggcacatgaagagccacacggatgaaaggccgcacaaatgccac
ttgtgtggacgtgccttcaggactgtaactcttctgaggaaccatctcaacacacacaca
ggcacaaggccccacaaatgtacggattgtgacatggcgtttgtgactagcggtgagctt
gtgcgacatcgccgctataagcacacccatgagaagcccttcaagtgttcgatgtgtgac
tatgccagtgtggaggtcagcaagctgaagagacacattcgctctcataccggagagcgt
ccattccagtgcagcctgtgcagctatgccagtagagacacctacaagctgaagagacac
atgagaacccattcaggagagaagccctacgaatgctacatctgtcatgcacgtttcacc
cagagtggcactatgaagatgcacatcctgcagaagcataccgagaacgtggccaagttc
cactgccctcactgtgacaccgtcattgctcgcaagagtgatttgggtgtgcatctgcgc
aagcagcattcctacattgagcagggcagaaagtgccgttactgtgaggctgtgtttcat
gagcgctacgctctcatccagcaccagaaatcccacaagaacgagaaacgcttcaagtgt
gaccagtgtgactatgcctgccgacaggagcgtcacatggtgatgcacaaacgtacccac
actggggaaaagccatatgcctgcagccactgtgagaaaacgttcagacagaaacaactc
ctggacatgcattttcgacgctaccatgaccccaactttgtgcccacttcttttgtgtgc
agcaagtgtggcaagaccttcactcgcaggaacaccatggccagacatgctgataactgt
actggactggaaggtggtgatggggagaatggtgctccgaccaagagaggccgtggtggc
agaaagaggaagatgcgctctaggaaggatgatgacgatgatgatagtgatgatcaagca
gagcctgacttggatgacattgatgaggaagatgaggaggaggaagatgttctcgatgac
atggagatggaggtagaacaggctccaccaaccgttcctgtcccagcccctgctgagccg
cctgtcaagaggaaacgtggccgacctcccaagaatcctcccaaacctccccctgctaag
aacacagccatagcacccactgcaactgccattatccaggtgaaggatgaaggcacggga
gccattgagaacatcatagtgaagaaggagcaggatggtgtggattcttcagtggtagca
tcagcagagccagtggtggaggaggttgaagccacagagggggaagtggaggcagagcag
ctctctgtccctgaggcagcacccaatggagacctcacccctgagatgatcctcagcatg
atggaccggtga
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integrated database retrieval system
