Tachysurus fulvidraco (yellow catfish): 113652818
Help
Entry
113652818 CDS
T08119
Symbol
rbbp8
Name
(RefSeq) DNA endonuclease RBBP8 isoform X3
KO
K20773
DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113652818 (rbbp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113652818 (rbbp8)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-C complex
113652818 (rbbp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CtIP_N
SAE2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
113652818
NCBI-ProteinID:
XP_027017899
LinkDB
All DBs
Position
3:32873031..32881897
Genome browser
AA seq
589 aa
AA seq
DB search
MSGSQCPDEVLTPGSSAGAAESMRLFHDLLESLRDCHANAVQELQLKVNKLKKERCSDAQ
RLEEFYKKNQHLREQQKTMQDSIRLLQERLKSGPCDRCRETEKQVKKTQDSVEYLPILNE
LQSERNLLKEENRKLRLQLERTRGQIFQQTSFSEPEEGVIPDSPKQPLSFPVVNKMKRKR
DQSHVRYAEKLLALTVLCSTDPQNREQATPPHLPAEAVFVPETCDLDVTCISKSSTKIHG
RTVVAESCCVDLHTEQVDMPESDVNSESFLSQPKHKANNLTRCPGAEEQNKGKTHDGMKS
SQKHTGTHLEQDACKRRSWETEQTESDTPSPRTPRQDSSPNEESWSMDPGVGLSQYDTSI
LPHPQPKLQTETIDLDCTYVSHSLLVAHRKQTELNQTNGITGIGQKANDSLANIFDTTGH
EDYESCPQDETSALEKEYVLENEEEEEWDEQNEGMKHDEQMEEDGEEAQFMDEEKPIGAP
AESAKNTSVACVVVVRKKAERRKLHGHTCKECEIYYRDLPEEERQKKLSSCSRHRFRFIP
PSTPENFWDVGFPSTQTCIERGYIREDKQTDPRLRRKKPYLATFSPKAP
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctctcagtgtcctgatgaagtcctcaccccaggcagcagtgcaggagccgcc
gagagcatgaggctgttccatgacctgctcgagagcctcagagattgtcatgctaatgca
gtgcaagaattgcagttaaaggtgaataaactgaagaaagaacgttgttctgatgcccaa
agactggaggagttttataaaaagaatcagcatttacgtgagcagcagaagaccatgcag
gactccatcagactactgcaggagagattaaaatccggaccgtgtgatcgctgcagagaa
acagaaaagcaggtgaaaaaaacacaagactcagttgaatatctgccgattctgaatgaa
ctccaatctgagagaaatctgcttaaagaggagaacaggaagctccgtcttcagcttgag
cgaacacgtggacaaattttccagcagacctcattctcagagccggaggaaggcgtgatc
ccagactcgccaaagcagccactgtcctttcctgttgtcaacaagatgaagcgtaagaga
gatcagagccacgttcgctatgctgaaaaactgctagcattaactgttttgtgttctaca
gacccccagaatagagagcaggccacaccgccgcacctccctgccgaagctgtgtttgtt
ccagagacatgtgatctggatgtcacgtgtatttcaaagagcagcactaagattcatggc
agaactgtggttgcagaaagttgctgtgtagacctacatactgagcaggttgatatgccc
gagagtgatgtaaactctgagagctttctcagtcagcctaagcacaaggcaaacaatctc
actcgttgtccgggtgccgaagagcagaataaggggaagactcacgatgggatgaagtct
tcacagaaacacactggcactcatctcgagcaggacgcatgcaaaagaagaagctgggag
accgaacagactgagtctgatactccgagtccacgtactccgagacaggattctagtcca
aatgaagagagctggagcatggacccaggtgtcggtctgtcccagtatgacaccagtata
cttcctcatccacagcccaaactacagactgagaccatagacctggactgtacatacgtg
agtcacagtctgctagtagctcatcgaaagcaaactgagttgaaccaaacaaatggcatc
acaggaatagggcagaaggctaatgacagcttagcaaatatctttgataccactgggcat
gaagattatgagtcttgccctcaggatgagacaagtgccttggagaaagagtatgttctt
gagaatgaggaggaggaagaatgggatgaacagaacgagggcatgaaacacgatgaacag
atggaggaagatggagaagaagcacagtttatggacgaagagaaacccattggagctcct
gctgagagcgctaagaacacgtctgttgcttgtgtggtggttgtacgtaagaaagctgaa
cgaaggaaacttcatggtcacacatgcaaagaatgtgaaatttattacagggacctccca
gaggaagagagacagaagaaactgtcgtcctgctcacggcatcgctttcggtttattccc
ccttccaccccggagaacttctgggacgtgggcttcccttctacacagacctgcatagag
agaggatacatcagagaggacaagcagacagatccacgtttgaggaggaagaaaccttac
cttgctacgttctcacccaaagctccgtag
DBGET
integrated database retrieval system
