Tachysurus fulvidraco (yellow catfish): 113652828
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Entry
113652828 CDS
T08119
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113652828 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113652828 (prpf3)
Spliceosome [BR:
tfd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113652828 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
113652828
NCBI-ProteinID:
XP_027017912
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All DBs
Position
3:32690365..32697785
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AA seq
698 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCLGKGLDKRKTTDQLRPFLDESAS
SFVERLFEALEESRNSRGNKGTVEKNRKRELKDVFGDEVEMQKDLEAGETTGKRKRVPRF
EEVEEPEVLPGPPTESPGMLTKMQIKQMMEAATRQIEERKKQLSITQPRLPLPTPQPSAP
GMRSLQPPAPGPGQSIAPSQAASFMNDAIEKARKAAELQAKIQSTLAMKPGILGAVPSAG
PHNLVALANLHAMGIAPPKVEAREITKPTPLILDELGRTVDASGKEVELTHRMPTLKANI
RAVKREQFKQQLKEKPSDDLESASYFDTRLAIPQPQRQKKGFRFHERGRFEKIGQRIRTK
AQLERLQMEIAQAAKKTGIQASTKLALIAPKKELGEGDVPSMEWWDSFILPNNVEFSPQA
VFNISDFHGITNLVEHPAQMAPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQKEMQEKV
RLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQ
RKEKKVKKLKEDLSHGVHIAVYRIRNLHSPSKKFKVEANANQLYLTGTVVLHKDVNIVVV
EGGPKSQKKFKRLMLNRIKWEEPSSKRDDPDGSDDEGSKKPNKCSLVWEGTAMERSFGDM
KFKQCPTENMAREHFKKHGAEHYWDLALSESVLETADD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcccaagagggaggtggaggagctgcggccctgggtggagcgcacggtgaag
aaggtgctgggcttctcagagcccactgtggtcactgcggctctgcactgcctgggcaaa
gggctggacaaaaggaaaacaacagaccagctgaggccgtttctggacgagtcggcgagc
agcttcgtagagaggctcttcgaagcgctggaagagagcaggaactctcggggcaacaaa
ggcacggtggagaaaaaccgcaagagagaactgaaggatgtgtttggcgacgaggtggag
atgcagaaagatctcgaggcaggcgaaacgacagggaagaggaagagagtacctcgattc
gaggaggttgaagagccagaagttcttcctggacctcctacagaaagtcctggcatgctc
acaaagatgcaaataaagcagatgatggaagcagccacacgccagatagaagagaggaag
aagcagcttagtatcacgcagcccagactgcccctacctaccccccaaccatcagcgcct
ggcatgcgctctctccagcctcctgctccaggcccaggtcagtctattgccccctcacag
gctgctagcttcatgaacgacgccattgagaaggcacgcaaagccgctgagctccaggcc
aagattcagtctactctggccatgaagccgggcatcctgggagctgtacccagtgctgga
ccacacaaccttgtggcactcgctaacctgcatgccatgggcatcgcaccacccaaagtg
gaggcccgtgagatcacaaagcccacgccactcattctggacgagctcgggagaaccgtc
gacgccagcggcaaagaggtggagctcacacaccgcatgccgactctgaaagctaacatc
agagcagtgaagcgagagcagtttaagcagcagctgaaggaaaagcccagcgatgacctc
gagtctgcgtcttacttcgacaccaggttggccattccacagcctcagagacaaaagaag
gggttcaggttccatgaaaggggtcgctttgagaaaataggccagcggatacgcaccaag
gctcagttagagaggttacagatggagattgcgcaggcagccaaaaagacgggcatccag
gcgtctaccaagctggctcttattgcccctaagaaggagctcggtgaaggtgacgtgcct
tccatggagtggtgggactccttcattctgcccaacaatgtcgaattctcgcctcaggct
gtgttcaatatctcggacttccacggaatcaccaatctggtggaacatcctgcacaaatg
gctcctccagtggatacggacaagccggtgactctgggtgtgtacttgactaagaaggag
cagaagaagctgaggaggcagacgcggcgtgagggtcagaaggagatgcaggagaaggtc
agactcggcctcatgcctccaccagaaccaaaagtacggatctctaacctgatgcgagtg
ctgggcacagaagccgtacaggatcccaccaaagttgaggcacatgtccgagcacaaatg
gccaagagacaaaaagctcacgaggaggcaaatgcagcacgcaaactgacagcagagcaa
aggaaggagaagaaggtgaagaagcttaaggaagatctgagccatggtgttcacatcgct
gtctataggatccgaaacctgcacagcccatctaagaaatttaaagtggaagccaacgct
aatcagctgtatctgaccggcaccgtggtgctgcacaaagacgtcaacattgtggtggtg
gaaggaggacccaaatcccagaagaagtttaagaggctgatgctgaacaggatcaaatgg
gaggagccgagctctaagagagatgaccctgacggctcggacgacgagggatcgaagaag
ccgaacaagtgctcgctcgtctgggagggcacagccatggagcgcagcttcggggacatg
aagttcaagcagtgtcccacagagaacatggcacgtgaacacttcaagaagcatggcgca
gagcactactgggatctggctctgagcgagagcgtgctggagacagccgatgactga
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