Tachysurus fulvidraco (yellow catfish): 113652981
Help
Entry
113652981 CDS
T08119
Symbol
toporsb
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113652981 (toporsb)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113652981 (toporsb)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tfd03037
]
113652981 (toporsb)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113652981 (toporsb)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113652981 (toporsb)
UBL E3 ligases
113652981 (toporsb)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
113652981 (toporsb)
Cilium and associated proteins [BR:
tfd03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113652981 (toporsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
zf_PCFS4
zf-ANAPC11
zf-RING_10
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
113652981
NCBI-ProteinID:
XP_027018135
LinkDB
All DBs
Position
23:complement(695838..701895)
Genome browser
AA seq
961 aa
AA seq
DB search
MMAPTKMKLRVRKKEKGSAKSSQQQQQPLRPETSPDSKCPICLDRFVNVASVERCLHRFC
FRCIREWAKNKAECPLCKQPFRSIFHSVRAENDFKEFVVMEENAQSATTSASAAVTLTAA
ALSVAPASQNDPEATATRTRSRATRTRQRRSQIPQDPAPSASSVEGVPLDHAALIQRDPA
CLRQLLPLLRRERVIGANPSELRPFLLARTDHILHELVSFARSIEAMQCPQPPSYEEDSG
SQSSIINISEDDDDSVEADVTKDSTQDHVPQFPMANSSEMSLSQSAWDDETPGPSYSTLG
HPEAEDVEPDVNQSEGTSAATEQREHNEDDDNGEEEECMIVGYVKPMAERTPELVQLSSD
STEEEEGGNEAASTETIMKAEISLPSHEQAPLSPKPYPSTSHTKRGENLEQSAEQDARMI
SHHRRKEHAPRHSFRKSSHSVSGSRSQSSSESSPQSKHSVKISRANIRLTCREQRRQSHH
MLGQSPSAFAEREGSSSEEHVQARSGYVREKSFKSFSPWDSPSHEGERRKKRRKKRREKE
TERSRSPHRKSQHCHGDRELWLPSSSSSDVDLCREKPAGKRKYKTRHLERTARRRSSGKS
RERERERERSPSVEIIFERRAADTHSRGRRHKKRCRRKEREQNSPTIITIDSDSSSDHTS
QTCHTEANSHTADLQNRIIDEDKDQIGNDLTADCQVRIADDNEHITDFSDHTIDYQERIA
ELSDRTTDDKDCVTDWRNFNRDSKDHFSEQTTDYQNCGTVLSDHMAEYEDGVAGDGIQTS
NHKDKVSEVADYTTDCRHGVRKAPDQDRSTDVSGRRAEYKHRVTEVNSKSTDCKGSVKDV
RGYTADSNHDHTTDLQESLLDVDNVSDQFQDSVADMRNRGEPSASVLDMLNLEHCFVDMV
QPTGDTGRMAATSLSGAPLLDVQDSMLGEGQRVLRNCTVDQQEVGLEAHRDQSEGGAKTA
H
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgatggcacccacaaagatgaagctgcgtgtgagaaagaaggagaaaggctctgcaaaa
tcgtctcagcagcagcagcagccgctccgtccggagacgtccccggactcgaagtgtccg
atctgtctggaccgctttgtgaacgtggcgtctgtggagcgctgcctgcaccgtttctgc
ttccgctgcatccgtgagtgggccaagaacaaagcggagtgcccattgtgcaagcagccg
ttccgctctatctttcactcggtgagggccgagaacgacttcaaagagtttgtggtgatg
gaggagaacgctcagagtgcgaccacgtcagcatcagctgctgttacactgactgctgca
gcattatcagtggcaccagccagccaaaacgaccctgaagctacagcaactcgaactcgt
tctagagcaacgaggaccaggcagaggcggagtcagatacctcaagaccccgccccttct
gcgtcctcagtggaaggtgtgccactggatcatgcagcattgattcagcgagatccagct
tgcctgcggcagcttctgccattgctacgccgtgagcgagtcattggagcaaatcccagt
gagctccgccccttcctgctggcacgaactgaccacatcctgcatgaactggtgagcttt
gcacgctccatcgaggccatgcagtgccctcaacccccaagctatgaggaggacagcggt
tcccagtcctctataatcaacatctcagaggatgatgatgacagtgttgaagcagatgtc
acaaaggacagcacccaggatcacgtgcctcagtttcctatggcaaatagcagcgaaatg
tccctcagccaatctgcctgggatgacgagactccaggcccttcctactccacccttggc
catccagaagcagaggatgtggagcctgatgtgaaccaatcagaaggaaccagtgctgct
acagaacagcgtgagcacaatgaggatgatgataacggtgaagaggaagagtgtatgatt
gtgggttatgtgaagccaatggcggaacgaactccagaacttgtgcagctttcttcagac
tccactgaagaggaggagggagggaacgaggcggcttccacggagaccattatgaaggca
gagatatcattgccatctcatgagcaggctccactctctcctaagccttatccttccacc
tcacacacaaagagaggagagaacctggagcagtcagcagagcaagatgccaggatgatc
tcacatcacaggaggaaggaacacgctccgagacacagcttcaggaaatcatcacactcc
gtttcagggtcccgttcccagtcgagcagcgagagctctccccaaagcaaacattcagta
aaaatcagcagagccaatataagattgacctgtcgagaacaaaggagacagagtcatcac
atgttaggacagagcccctccgcttttgctgaaagagagggttcctcctcagaggaacat
gtccaagctcgttccggttatgtgagagagaaatcatttaagtctttctctccgtgggat
tcgcctagccatgaaggtgaacgcagaaagaagaggaggaaaaagaggagagagaaagaa
acagagaggagtaggtcccctcatcggaaatcacaacattgccatggtgaccgcgagctc
tggctcccaagcagcagcagtagcgatgtggatttatgccgggaaaaacctgctgggaaa
cgcaaatacaaaactcggcacctagagagaacggctcggcgtcggagcagtgggaaatcc
agggagagggaacgggagagggagcgaagtccaagtgtggagatcatctttgagcgccgg
gccgcggacacgcactcgaggggccggaggcacaaaaaaaggtgtcggagaaaagagcga
gagcagaactcccctaccattatcactatagacagcgacagcagcagcgatcacaccagt
cagacctgtcacacggaggctaacagtcacactgccgacttacagaaccggattatagat
gaggacaaagaccaaataggtaacgatctcaccgctgactgtcaagttcgcattgctgat
gacaacgaacacatcactgactttagtgatcacaccatcgattatcaggaacggattgct
gagctcagcgatcgaaccactgatgataaagactgtgttacagactggagaaactttaac
agagactctaaagatcattttagtgagcagaccactgactatcagaactgcgggacagtg
ttgagtgaccatatggctgaatatgaagacggcgttgcaggtgatggcattcaaacctct
aatcataaagacaaagtatcagaggttgccgactacaccaccgactgcagacacggtgtt
cggaaagctcccgatcaggaccgctctacagacgtgagcggccgcagggctgaatataaa
caccgtgttacggaggttaacagtaagagcactgactgtaaaggtagtgttaaagatgta
aggggttacacggctgactctaatcatgatcacaccactgacttgcaagagtcccttttg
gatgttgacaatgtttcagaccaatttcaggactctgtagccgatatgaggaaccgaggt
gagccaagtgcaagtgttttggacatgctgaacctggagcactgctttgtggacatggtg
cagccaaccggggacactggccgcatggcagcgacatcgctctcgggtgcaccgctgctg
gacgtacaggatagtatgttgggggaggggcaaagggtgcttaggaattgtactgtggac
caacaggaggtggggcttgaagctcatagagaccaatcagagggaggggcgaagacagca
cactga
DBGET
integrated database retrieval system
