Tachysurus fulvidraco (yellow catfish): 113653005
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Entry
113653005 CDS
T08119
Name
(RefSeq) protein SOGA3-like isoform X1
KO
K27704
microtubule cross-linking factor
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113653005
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113653005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
ATG16
APG6_N
DUF6003
Halo_GVPC
VasI
Motif
Other DBs
NCBI-GeneID:
113653005
NCBI-ProteinID:
XP_027018169
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All DBs
Position
23:825528..830292
Genome browser
AA seq
732 aa
AA seq
DB search
MWRSGHTHTQTHTPHTHHTHTTHTHTHSHRLERPKHSNSSNMQSEPTEPEPRRDEELRSL
QDENEALRTEIQEMRVEMEEMHDAFYEEDTCQMHELRRELERANKNCRILQYRVRKAERK
HLRFTSGREIDEELLRNLEQDLKVAKDVSVRLHNELKNVEEKRTKTEEENERLREKLIQL
EVNKETLQNELERAREKRRSNKDAQRSERKNTQTLSEEDSEDLKCQLSFINEEMTLMRKK
MAKLDKEKDDAEQELQKYRSFYGDFDSLQFKGEAVGPPTARQSELRLRLRLVEEEANILG
RKIVELELENRALRAELDNMRGGEEVCPGATEGVVDVNQGELSELRQQLQLVEDEAELLR
RYLADAEEQNRKVKSELKKLRFKEASRHAAEGGALSSEGGATAMEMLKEELKAARMQVND
LSGKVMQLQYEKRVMLNKQSDDRRREERGGQRQTGGGEIGATGAKEEGGGKESRGTTEED
EEATGAEKKGGEGNLQEGTTADEGERGGGGGEEEKGERGADGQGRGETADHGGRERERSG
GEERGGREGESDDSSSSLLLPLHQKREGPIGGESDSEDMLHSSVSPHPLIRRSTPPLLPR
SPRERQRMTEIRAEAERLTHTIELLIAHTQEFVADSEQAGGEDGDDEDVRTRERQLLHRI
GTQMNEFRTELQCFMGIIEKMDGSKRDEPHAEERLSMFQPLILLILILLLFSSLSYATMF
RLVFLFTLFFVL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggtccggtcacacacacacacagacacacacaccacacacacaccacacacac
accacacacacacatacacactcacaccggcttgagcgacccaaacactcaaacagcagc
aacatgcaaagcgaaccgacggaaccggaaccgcgccgagatgaagagctccggagttta
caggatgagaatgaagctcttagaactgagattcaggagatgcgggtggagatggaggag
atgcacgatgcattttatgaggaagacacctgccagatgcatgagctgcggagagagctg
gagcgagccaataaaaactgcaggatccttcaataccgcgtgcgcaaagcagagcgcaaa
cacctgcgcttcacatcgggcagagagatcgacgaggaactgctgaggaacctggagcaa
gacctgaaggtggcaaaggacgtgtcagtgagactccacaatgagctgaagaacgtggag
gagaaacgcacaaagacagaagaagagaacgagagactgagagagaaactcattcagctg
gaagtcaacaaggagacactgcagaatgagctggagcgagccagagagaagaggagaagc
aataaagatgctcagaggagtgagaggaagaacactcagaccctcagcgaggaggacagc
gaggatctgaagtgtcagctgtccttcattaatgaggaaatgacgctcatgaggaagaag
atggcgaagctggacaaggagaaggatgatgcagagcaggagctgcagaagtatcgatcc
ttttacggtgacttcgacagcctccagtttaaaggtgaagcagtgggaccgcccaccgct
cgtcagtcagagctgaggctccgcctccgactggtggaggaggaagccaacatcctgggg
cgcaagattgtcgagctggagctggagaaccgagctctgagggcggagctggacaacatg
agaggaggagaagaagtgtgtccaggagcgacagagggtgtggttgatgtaaatcaaggt
gagctttctgaactgaggcagcagctacagctagtggaagacgaggcagaattattgagg
cggtatttggcagatgcggaggagcagaacaggaaagtgaagagcgagctgaagaagctg
cggtttaaagaggcgtcgagacatgcagcagagggcggagctctatcatcagagggcggg
gctacagctatggagatgctgaaggaagagctgaaagcagctcgaatgcaggtgaatgac
ctgagtgggaaggtgatgcagctgcagtatgagaagagagtaatgctgaataaacagagt
gatgacagaagaagagaagaaagaggaggacaaagacaaaccggagggggagaaatagga
gcaacaggagcaaaagaagaaggaggaggaaaagaaagcagaggaacaactgaagaagac
gaagaagcaacaggagcagaaaaaaaaggaggagaaggaaatttgcaagaaggtactaca
gcagatgaaggagaacgaggaggaggaggaggtgaggaagagaaaggagaaagaggagca
gatggacaaggaagaggagaaactgcagatcatggtggaagagaaagagaaagaagtgga
ggagaagaaagaggaggtagagaaggagaaagcgatgactcctcgtcctcattacttctc
cctcttcatcagaagcgtgaaggccccatcggaggtgaaagcgactcggaggacatgctg
cactcgtctgtctctcctcatcccctcatccgtcgctccactcctccactcctccctcgc
tcaccccgcgagcgccagcgcatgacggagatccgagccgaggcagagcgtctgacgcac
accatcgagctcctcatcgctcacacgcaggagtttgtggctgacagcgagcaggctgga
ggagaggatggtgatgatgaagatgtgaggacacgtgaacgacagctgctccatcgcatt
ggcacgcagatgaacgagttcagaactgagctgcagtgcttcatgggaattatagagaaa
atggatgggtctaagcgggacgaaccacatgcggaggagcggctgtctatgttccagcca
ctcatcttactcatcctcatcctcctgctcttctcttcgctttcctatgccaccatgttc
agactcgtttttcttttcaccctctttttcgtgctgtga
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