Tachysurus fulvidraco (yellow catfish): 113653017
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Entry
113653017 CDS
T08119
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113653017 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
tfd04031
]
113653017 (trim23)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113653017 (trim23)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113653017 (trim23)
GTP-binding proteins [BR:
tfd04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
113653017 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
MMR_HSR1
zf-RING_2
zf-C3HC4
FemAB
Motif
Other DBs
NCBI-GeneID:
113653017
NCBI-ProteinID:
XP_027018186
LinkDB
All DBs
Position
20:21685403..21694207
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AA seq
579 aa
AA seq
DB search
MAAAVGVNKQTNAASMEPCVRHGRGTAGNTVKVLECGVCEDVFSLQGDKVPRLLLCGHTV
CHDCLTRLPLHGRAVRCPFDRQATELGDSGVWGLKKNFALLELLERLQNGASNQSGMSEE
ALREMGECIIRCDEDESHTASVYCTVCATHLCADCSQLTHSTRTLAKHRRVPLADKPHEK
TLCPQHQVHAIEFVCLEEGCQPGLLMCCVCKEYGKHQGHKHAVLEAEANQIRASILDMAH
CIRSFTEEVSEYSRKLVGIVQQIEGGEQIVEDGVGMAHTEHVPGTAENARSCVRAYFADL
HETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVL
AKQEINRLLETLQKQQQQFTEMADHVQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDGA
GKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAV
VFVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHKL
CCGRSWHIQGCDARSGTGLHEGLDWLSRQLVAAGVLDVA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgtcggtgtcaataagcaaacaaacgcagcatcgatggagccgtgtgtc
cgccatggcagaggaaccgcgggcaacacggtgaaggtgttggagtgtggagtgtgtgag
gacgtgttctctctgcagggtgataaagttcctcggctgctgctgtgtggtcacaccgtg
tgtcacgactgtttaacacgtctccctcttcatggcagagccgtacgctgtcctttcgac
agacaggccacggagctgggagactcgggtgtgtggggtttgaagaaaaactttgctctt
ctggagctgctggaacggctgcagaacggtgcgtccaatcagtctggcatgtcagaagaa
gccctgagagagatgggagagtgcatcatacggtgtgatgaggatgagagccacactgca
tcagtgtactgcaccgtgtgtgccacacacctctgtgccgactgctctcagctcacacac
tccacccgcacgctggccaaacaccgccgtgtcccgctggccgacaaaccgcacgagaag
acgctgtgtcctcagcaccaggtccacgctatcgagtttgtgtgtctggaggagggctgt
cagcccgggctgctaatgtgctgcgtctgcaaagagtacggcaagcaccagggacataag
catgcagttctggaagccgaagccaatcagatccgggcgtccatcctggacatggcgcac
tgcattcgctccttcacagaggaagtgtccgagtattccaggaagctggtgggcatcgtg
cagcagattgagggaggagaacagattgtagaggatggagtggggatggctcatacagaa
catgttcctggcacagcggagaacgctcggtcctgtgtgcgggcgtacttcgccgacctc
cacgagacgctgtgtcgccaggaggagatggcgctcagcgtggtggacgctcacgtcagg
gagaggctcatctggctccgacagcagcaggaggacatgaccatcctcttgtctcaggtg
tcaactgcctgcctgcactgtgagaaaaccctgcagcaggacgactgcagggtggttctg
gcaaagcaggagattaacaggttgctggagactctgcagaagcagcagcagcagtttaca
gaaatggctgatcatgttcagctggatgcaggtatccctgtaaccttcaccaaggataac
cgagtacacatcggccccaagatggagatccgggtggtgacactggggctggatggtgca
ggaaaaaccaccatcctgtttaaactgaaacaagacgagttcatgcagccaatccccact
ataggctttaacgtggaaacagtggagtataaaaacctgaagttcaccatctgggacgtt
ggagggaaacacaagctgaggccgctgtggaaacactactacctgaacacacaggcggtg
gtgtttgtgattgacagctgtcacagagacagactgatggaggctcacagtgaactggcc
aagctgctgacagagaaggagctgagagacgctttactgctcatcttcgccaacaaacag
gacgtccccggtgctgtgtcggtggaggagatgacggaactcctgagcctccataagctg
tgctgtgggcggagctggcacattcagggctgtgatgcacgcagtggtacgggtttgcac
gagggactggactggctctcacgccagctggtggctgcaggggttctggacgtggcgtaa
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