Tachysurus fulvidraco (yellow catfish): 113653068
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Entry
113653068 CDS
T08119
Symbol
cnga1b
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
113653068 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113653068 (cnga1b)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113653068 (cnga1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Sec62
Connexin
Tim54
EMC3_TMCO1
Piezo_TM1-24
DUF3043
CDC45
Peptidase_U57
OATP
TCP
Neur_chan_memb
Menin
BSMAP
SLC52_ribofla_tr
NPR3
Serinc
DUF2828
ADI
Motif
Other DBs
NCBI-GeneID:
113653068
NCBI-ProteinID:
XP_047663315
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All DBs
Position
23:418116..421958
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AA seq
661 aa
AA seq
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MDRWLSQSAAMSNSVKPLIPPIILLEGVEEVTVSNTEDTTXAIHPSYGSNVNNSNNNEEE
DKKEKKKKEKKEKKEKKEKKEKKEKREKKKAKEQEEKEKEKEKEKAKKEEPKEIYVIDPA
GNTYYNWLFVITCPVMYNWVLIIARACFEELQHDYLLLWFITDFLADLVYLADMVFRTRT
GYLEQGLLVKDEQKLRARYMESVQFKLDLISMIPTDLCYFFVGLNYPEIRMNKLFRVNRL
FEFFQRTETRTNFPNVFRISNLVMYIVIIIHWNACLYYSFSKAIGFGADRFVYPDIRDPE
FGRLARKYAYSMYWSTLTLTTIGETPPPEKDSEYFFVVTDFLVGVLIFATIVGNVGSMIT
NMNAARADFQARIDAIKQYMSFRNVTKDLEKRVIKWFDYLWTNKKAVDEREVLKYLPDKL
RAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKE
GKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDL
MEALTEYPDAKAMLEEKGRQILMKDNLLDLEVARQGPDPKDMEEKVIKIGTVLDDMQTRF
SRLLAQHEATQSRLKRRVTKLESKIPTATGVTFTEMTKTEPVVLPPPEKEEKISEEKKAE
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggataggtggctcagccaatcagctgccatgtcgaatagcgtaaagccactcatacct
cccataatcctcctggagggggtggaggaggttaccgtgagcaacacagaggacacgacg
tgagcaatacatccatcttatggctccaacgtcaacaacagtaacaacaatgaagaagag
gacaagaaagagaaaaagaagaaagaaaagaaagagaaaaaagagaaaaaagaaaagaaa
gaaaagaaggaaaagagggaaaagaaaaaggccaaagagcaagaggagaaagaaaaggag
aaggagaaagagaaagcaaagaaagaggagccaaaggagatttacgtcatagatcctgca
ggaaacacctactacaactggctgttcgtcatcacctgtcctgtcatgtataactgggtc
ctgatcatcgccagagcctgttttgaggagttacagcacgattatttgttattatggttc
atcactgattttctagcagacctggtttacctggcagacatggtgttcaggacaagaaca
gggtatctggagcagggtctgctggtcaaagacgaacaaaagcttcgagcccgatatatg
gagagtgtccagtttaagctggacctcatttctatgattcccacagacctttgttacttt
tttgttggtctgaactacccagagatccgcatgaacaagctcttccgggtcaaccgcctc
tttgagtttttccagcgtactgaaacgaggaccaactttcccaatgtcttccgaatctcc
aaccttgtcatgtacattgtcattatcatccactggaatgcttgcctttactactcattc
tccaaggctatcggttttggagctgatagatttgtctatccagacattagggacccagaa
tttggccgtttggcgaggaaatatgcatacagcatgtactggtccactctcaccttgacc
accattggtgaaactccacctcctgagaaggattctgagtacttttttgtggttacggac
ttcctagtgggagttttgatctttgctacaatcgttggtaatgtgggttccatgatcaca
aacatgaatgcagcaagagcagattttcaagcccgaattgacgccatcaagcagtacatg
agctttcgtaatgtgaccaaggatctggagaagcgtgtcataaaatggtttgattacctc
tggaccaataagaaggctgtagatgagagggaagtgctcaaataccttccagacaagtta
agagcagaaatcgccatcaatgtgcacctggacactcttaagaaagtgagaatctttgct
gattgtgaggccggacttctggtcgaacttgtgctgaagctccagccgcaagtttacagt
cctggtgattacatttgcaaaaaaggtgatattggccgtgaaatgtacatcattaaagaa
ggaaagcttgctgtggtagctgatgatggcatcacacaatttgttgtcctcagtgatgga
agctactttggcgagatcagcatcctcaatatcaaaggcagcaaagctggaaaccgaaga
acggccaacattcgcagcatcggatactctgatttgttctgcctttccaaggatgacttg
atggaggcactgaccgaatatccagatgcaaaggcaatgttggaggagaagggacgccag
atcctcatgaaggacaacttgctggatcttgaggtggcaagacagggaccagaccccaag
gacatggaggagaaagtgataaaaatcggcacagtattggacgacatgcagacacgtttc
tcccgtttacttgctcaacacgaggccacgcagagccgcttgaagagacgtgtcaccaaa
ctggagagcaaaatcccaaccgccactggggtcacattcactgagatgaccaagaccgag
ccggtggttctgcctcctcctgagaaagaggagaaaatatcagaggagaagaaagccgaa
aagtaa
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