Tachysurus fulvidraco (yellow catfish): 113653137
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Entry
113653137 CDS
T08119
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113653137 (cwc22)
Spliceosome [BR:
tfd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113653137 (cwc22)
Complex C
U4/U6.U5 tri-SnRNP related factors
113653137 (cwc22)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Cnd1
DUF7026
PRP38
Motif
Other DBs
NCBI-GeneID:
113653137
NCBI-ProteinID:
XP_047670820
LinkDB
All DBs
Position
6:complement(6085578..6121347)
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AA seq
1348 aa
AA seq
DB search
MATENEAVVDLNSPVKDEHSSPSGTRDPERTTRSSSSSSDSDGDKHLRSRDEARRSPSPL
SRDVAEEQTEQDAVPRRSSASRSSDDDDDSSSEEDSDDGVMHRMKSSVAHIRRDVQDESS
RPRRRSSSADRNGSGRSYSRSRSRSPSPQRRTDRARRSRDRDGHWRSERRSSRERDGDRE
RFRPRRGRSSSPSQRDKTPADEPPVKKRKEELDPILTRTGGAYIPPAKLRMMQAQITDKS
SLAYQRMSWEALKKSINGLINKVNVSNIGNIIQELLQENIVRGRGLLARSVLQAQSASPI
FTHVYAAVVAIINTKFPQIGELILKRLILNFRKGFRRNDKQQCLTASKFVAHLINQNVAH
EVLCLEILTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNVLHESEIDK
RVQYMIEVMFAIRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLEDDYNTEDILNVFKMDPD
FLENEEKYKTIRKEILDEGSSDSDGDAEGSDDEDGDNEDEAAEAGEDEDKITIFDKTEVN
LVSFRRTIYLAIQSSLDFEECAHKLIKMNFPENQTKELCNMILDCCAQQRTYEKFFGLLA
GRFCLLKKDYMESFEAIFQEQYETIHRLETNKLRNVARMFAHLLYTDSVPWSVLECIRMS
EETTTSSSRIFVKILFQELCAYMGLPKLNERLKDMTLQPYFEGLFPRDNPRNTRFAINFF
TSIGLGGLTDELREHLKNAPKMIMTQNQDVESSDSSSSSSSSSNSSSSGSDSDSSESDDS
SGSSSSSDSDSDTKQKKISQHGKKHKEKSSKHSCPAEERQSKRNQKLDKSAEDPLRKRDK
SHKDMRERGRRDSPVQARGRKESPDLRERGQMHSPDLQARARRDSPDVRPRGRKDSPDKR
RRKESPDVQPRGKRDSPDESRRKNSPDVRTHGRRDSPDERRRKDSPDVRPYGRRDSPDKR
RGKGSPDVRPRGKRDSPDERGCERRDSPVAREKGRRDSPVAREKGRRDSPVARVKGRRDS
PFAREKERRESPVARLRRESPVMRGRRESPVARGRRESPVARGRRESPVERGRRESPVER
ERGRRESPVERGRRESPVARGRKESPVARERGRRESPVARKSGRRDSPVARGRRDSPDVR
GRRESPDVRGSGRRESPDVSGRRELPDARGRRESPDARGRRESPDARGRRESPDARGRRE
SPDARGRRESPDARGRRESPDARGRRESPDARGRRESPDARGRRESPDARGRRESPDARG
RRESPDARNRNWQYKNRDNEDSRKYKDTKRDRECRRSQEKERSKSKSQERTSRDSYRNGT
ERDNKENRYRESRRREDRSVERSPRRRR
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaaaacgaagcggttgtggatttgaattcgcctgtaaaagatgagcactcc
agtcccagtggaacccgtgatcctgagaggacaacaaggagctccagctcttcaagtgac
agtgatggagacaagcacctgaggagcagggacgaagcgcgccgtagcccttctcctttg
agcagagatgtcgccgaagagcaaaccgagcaagacgcagtgccgagacgctcatctgcg
tccagaagttcagacgacgacgacgacagcagcagtgaggaggacagcgatgatggtgtg
atgcacaggatgaagagcagcgtggcacacatcaggcgtgacgttcaggacgagagcagc
agaccccgacgaaggagctcctctgcagacaggaacggcagtggaaggtcgtattcccgc
tctcgctccagatctccgtccccacagagacgcacagacagagcccgcaggtctcgagat
cgggacggacactggcgttccgaacggcgctccagccgtgagcgagatggggatcgagag
aggttcaggcccaggaggggaagatcttcctctccatcacagagagacaaaaccccagct
gatgagcctccagttaagaaaaggaaggaggagctggaccccatcttgactcgcaccggt
ggagcgtacatccctccggccaagctgcgcatgatgcaggcccaaatcactgacaagagc
agtctagcgtaccagaggatgagctgggaagcgctgaagaagtccatcaatggtctgatt
aacaaagtaaacgtgtccaacatcgggaacatcatccaggagctgctgcaggagaacatc
gtccgcggcagaggtctgctggcgaggtctgtgctccaggctcagagcgcttctcccatc
tttacccacgtctacgccgccgtggttgccatcatcaacaccaaattccctcagatcgga
gagctcatcctcaagaggctcatcctcaacttccgcaaaggcttcaggagaaacgacaaa
caacaatgtctcacagcctccaaatttgtggctcatctcatcaatcagaacgtggctcac
gaagtgctgtgtctggagattctgactctgctcttggagcggcccactgatgacagcgtg
gaggtggccatcagcttcctgaaggagtgtggcctcaaacttacagaggtttccccgcgc
ggcattaatgccatcttcgagcgcctgaggaacgtcctgcacgaatcagagatagataaa
cgtgtgcagtacatgattgaggtgatgtttgccatcaggaaggatggctttaaggaccat
cccataattcctgaaggcctggacctggtggaggaagaagaccagttcactcacatgctt
cctctagaggacgactacaacacggaggacattctcaatgtcttcaagatggatccagac
ttcctggagaatgaggagaagtataagacgattagaaaggaaattctggatgaggggagt
agcgattcagatggcgacgcagaaggcagcgacgatgaagacggcgacaacgaagacgaa
gctgcagaagccggagaagatgaagacaaaatcaccattttcgacaagaccgaggtgaac
ctggtatcattccgccgcaccatttatctggccattcagtcaagcttggactttgaggaa
tgtgctcacaagctgatcaagatgaacttccctgagaaccagacgaaggagctgtgtaac
atgatcctggactgctgcgcccaacagagaacctacgagaagttctttggtcttctggct
gggcgcttctgcttgttgaagaaggactacatggagagttttgaggccatcttccaggag
cagtacgaaaccattcacaggctggagaccaacaaactccgcaacgtggctcgaatgttc
gcacacctcctctatacagactccgtcccgtggagcgttctagagtgcatccgaatgagt
gaagagacgacgacgtcctcaagccgtattttcgtcaagatcctcttccaggagctgtgt
gcctacatggggcttccgaagctcaacgagagactcaaggacatgaccctgcagccctac
ttcgaaggcctgttccctcgcgacaacccgaggaacaccagattcgccatcaatttcttc
acctccatcggtctcggaggcctcacagatgagctaagagagcatctaaagaacgcccca
aagatgatcatgacccagaatcaggacgtcgagtcttctgactcttcctcctcctcatct
tcctcatcaaactcgtcgtcctcgggcagcgactcggactccagtgagtcagatgactcg
tctggcagctcgagctcttcagattcagactcagacacgaagcagaaaaagatttcccaa
catggaaagaagcacaaggagaagagctctaaacacagctgtcctgcagaagagagacaa
agtaaaagaaaccagaaactagacaaaagtgcggaggaccctctaagaaaacgggacaaa
tcccataaggatatgcgagaacgtgggcgaagggactcgcctgtgcaagctcgtggacgg
aaagaatctcctgatttgcgagagcgtgggcaaatgcactctcctgacttgcaagcacgt
gcgagaagggactctcccgatgtacggcctcgtggaagaaaagactcacctgataaacgc
aggcgaaaggagtctcctgatgtacaacctcgtgggaaaagagactctcctgatgaaagc
aggcgaaagaactctcctgatgtacgaactcatggaagaagagactctcctgatgagcgc
aggcgaaaggactctcctgatgtacgtccttatggaagaagagactcacctgataagcgc
aggggaaagggttctcctgatgtacgtcctcgtgggaaaagagactcacctgatgagcgt
gggtgtgaaagaagggactcgcctgttgcgagagagaaggggagaagggactcacctgtt
gcgagagagaaggggagaagggactcgcctgttgcaagagtgaaagggagaagggactca
ccttttgcaagagagaaagagagaagggagtcaccagttgcgcgcttgagaagggagtcg
cctgttatgcgcggcagaagggagtcaccagttgcacgcggcagaagggagtcaccagtt
gcgcgcggcagacgggagtcgcctgtagagcgcggcagaagggagtcacctgtagagcgc
gaacgcgggagaagggagtcgcctgttgaacgcgggagaagagagtctcctgttgcacgc
gggagaaaggagtcgcctgttgcgcgcgaacgggggagacgggagtcgcctgttgcacgc
aagagcgggagacgggactcgcctgttgcgcgcggaaggcgggactcgcctgatgtgcgc
ggaagacgggagtcgcctgatgtgcgcgggagcgggaggcgggagtcgcctgatgtgagc
gggaggcgggagttgcctgatgcgcgcgggaggcgggagtcgcctgatgcgcgcgggagg
cgggagtcgcctgatgcgcgcgggaggcgggagtcgcctgatgcgcgcgggaggcgggag
tcgcctgatgcgcgcgggaggcgggagtcgcctgatgcgcgcgggaggcgggagtcgcct
gatgcgcgcgggaggcgggagtcgcctgatgcgcgcgggaggcgggagtcgcctgatgcg
cgcgggaggcgggagtcgcctgatgcgcgcgggaggcgggagtcgcctgatgcgcgcggg
aggcgggagtcgcctgatgcgcgcaaccgcaactggcaatacaaaaaccgagataatgag
gactcgcgtaaatacaaggacaccaagagagacagagagtgcagacgcagccaagagaaa
gagaggtcaaagtcaaaatctcaggagagaaccagcagagactcgtataggaacggaacg
gagcgtgacaacaaggagaaccggtacagagagtccaggaggagagaggacagaagtgta
gagagatcacccagaagacgcagatag
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