Tachysurus fulvidraco (yellow catfish): 113653323
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Entry
113653323 CDS
T08119
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
tfd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113653323
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113653323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113653323
03009 Ribosome biogenesis [BR:
tfd03009
]
113653323
04131 Membrane trafficking [BR:
tfd04131
]
113653323
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113653323
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113653323
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113653323
Membrane trafficking [BR:
tfd04131
]
SNARE
SNARE associated proteins
Others
113653323
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113653323
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113653323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_lid_PRS2_C
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
113653323
NCBI-ProteinID:
XP_027018644
LinkDB
All DBs
Position
9:complement(6319882..6329272)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDSCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNINWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGSVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPIAKDVDLDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
GGPSQGSAGGSGGNVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggcggagaatctaaaaacgatgacctttctactgctattctaaaacaaaag
agcagacctaacaggttgattgttgatgaatccatcaatgaagataacagtgtggtctcc
ctctctcaggccaagatggatgagcttcagcttttcaggggggacactgtgctgatgaag
ggcaagaaaaggagggagaccgtttgcatcgtactgtcagatgatagctgctctgatgag
aaagtgcgtatgaacagggtggtgcgcaataacctcagggttcgtctcggtgatgtcatc
agcattcagccatgcccagatgtgaagtatgggaaacgcatccatgttctgcccattgat
gacacagtggagggaatcactggcaacttatttgaggtctacctgaagccttacttccta
gaggcttaccgaccaatccgtaaaggtgatatcttcctggtcagaggaggcatgcgtgct
gttgagtttaaagtggtggagactgaccctagtccctactgtattgtggctccagacact
gtcattcactgtgaaggagaacctattaagcgtgaggatgaagaagaatccctgaatgaa
gtaggctatgatgacattggaggtgtgaggaagcagctggctcagatcaaagaaatggtg
gagctgccactcagacacccagcactcttcaaggccatcggtgtgaaacctcctcgtggt
attcttctgtacggaccccctggaactggaaaaactctgattgctcgtgctgttgcaaat
gaaactggagcattcttcttcctgatcaatggccctgaaattatgagcaaactggccggt
gaatccgagagcaacctgcgtaaagcttttgaagaagctgagaagaacgctcctgccatc
atcttcattgatgaattggatgctattgcacccaagagagagaagactcatggtgaagta
gagaggcgcatcgtgtctcagctgctcaccctgatggacgggctgaagcagcgggctcac
gtcatcgtcatggctgccaccaacagacccaacagcatcgacccagctctcaggagattc
ggacgctttgacagagaggtggacattggcattcccgatgctacaggcagactggaaatc
ctgcagatccacaccaagaacatgaagctggctgatgatgttgacctagagcaggttgcc
aacgagacccacggtcatgttggtgctgatttggctgccctgtgctcagaggcggcactg
caggccatccgcaagaagatggacctcattgacttggaggacgagacgattgatgcagag
gtcatgaattccctggctgtcaccatggatgactttaggtgggccctgagccagagcaac
ccatcagccctgcgtgagactgtggtggaggtgcccaacatcaactgggaggacattggt
ggactggatgatgtcaagagagaactgcaggaactggtgcagtacccagtggagcatcca
gacaaattcctgaagtttggaatgaccccatctaagggtgtgttgttctatgggccgcca
ggttgtggtaaaaccctcctggccaaggccattgcaaatgagtgccaggccaacttcatt
tccatcaaaggtcctgaactgctaaccatgtggtttggagaatctgaggctaatgttcga
gaaatctttgataaggctcgtcaagctgccccctgtgttctcttctttgatgagctggac
tccattgctaaagcccgtggtggaagcgttggtgatggtggtggagcagctgaccgtgtc
attaaccagatcctgaccgagatggatggcatgtccagcaagaagaatgtcttcatcatt
ggtgccaccaacaggccggatattattgaccctgccatcctcaggcctggccgcttggac
cagcttatctatatcccactgcccgatgagaaatcccgcatggccatccttaaagctaac
ctcaggaagtctccaatcgcaaaggatgtagatctggactacttggccaagatgaccaac
ggcttctctggagctgacttgacagaaatttgccagagagcctgtaaactggctattcgt
gagtctatcgagaacgagatcaggagggaacgtgagaggcagacaaacccatcagccatg
gaggtggaggaggacgacccagtgcctgagatcaggaaggaccactttgaggaggcaatg
cgtttcgcccgtcgctctgtcagtgacaacgacattcgcaaatacgagatgtttgcacag
acactgcagcaaagcagaggcttcggcagcttcagattcccttccggtaatcagggagga
ggtggaccaagccaaggttctgcaggtggcagcggcgggaacgtctttaacgaggacaac
gacgatgacctttacggataa
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