Tachysurus fulvidraco (yellow catfish): 113653327
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Entry
113653327 CDS
T08119
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
tfd03015
mRNA surveillance pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113653327 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
113653327 (eif4a3)
03015 mRNA surveillance pathway
113653327 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113653327 (eif4a3)
03041 Spliceosome [BR:
tfd03041
]
113653327 (eif4a3)
03009 Ribosome biogenesis [BR:
tfd03009
]
113653327 (eif4a3)
03012 Translation factors [BR:
tfd03012
]
113653327 (eif4a3)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113653327 (eif4a3)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113653327 (eif4a3)
mRNA cycle factors
Stress granule specific factors
113653327 (eif4a3)
Spliceosome [BR:
tfd03041
]
Complex C
Other components
EJC/TREX
113653327 (eif4a3)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
90S particles
Helicases
113653327 (eif4a3)
Translation factors [BR:
tfd03012
]
Eukaryotic type
Initiation factors
eIF-4
113653327 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
113653327
NCBI-ProteinID:
XP_027018653
LinkDB
All DBs
Position
2:complement(36225349..36230175)
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAPVSGRKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVA
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcacctgtaagtgggaggaagcgactcctgaaggaagaagatatgactaaa
gtggagtttgagaccagtgaggaggtcgatgtgactccgacgtttgatacgatgggcctg
agggaggatttactccgcgggatctacgcttacggttttgaaaaaccatcagctattcag
cagagagccattaaacagatcataaaggggagagatgtcattgctcagtcacagtctggt
actggaaaaacggccacattttgtgtatcagtgctgcagtgtctggacattcaggtgcgt
gagacccaggcgctaattttggctccaaccagagagttggctgggcaaattcaaaaggtt
cttcttgctctgggtgactacatgaatgtccagtgccatgcctgtatcggcggaacgaat
gtgggtgaggacatcaggaagcttgactatggtcagcatgttgtagcaggaaccccgggc
agagtttttgatatgattcgtcggagaagtctgaggacacgtgccatcaagatgttggtt
ctggatgaagctgatgaaatgcttaacaaaggttttaaggagcagatttatgatgtgtat
cgatacctgcctcctgctactcaggtggttctaatcagtgccaccttaccacatgagatc
ctggagatgaccaacaaattcatgacagaccccattcgcatcttggtcaagcgtgatgag
ttgacactggagggcataaagcagttcttcgtggctgtggagagagaagagtggaagttc
gacacgctgtgtgatctgtacgacacactgaccatcacgcaagccgtcatcttctgcaac
accaagcgaaaggtggactggctgactgaaaagatgagggaggcaaatttcaccgtggcc
tctatgcatggagacatgccccagaaagaaagagagtccattatgaaggagttccgatct
ggagcaagccgagtgctgatctcgacagatgtgtgggctagagggttggacgtaccacag
gtctctcttatcatcaactacgatctgcccaacaacagagaattgtacatccacagaatt
ggacgatcaggtcgttatggccgtaagggtgtggccatcaactttgtaaagaacgatgac
atccgtatcctccgtgatattgagcagtactattccacacagattgatgaaatgccaatg
aacgtggctgatctgatctga
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