Tachysurus fulvidraco (yellow catfish): 113653329
Help
Entry
113653329 CDS
T08119
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X18
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04010
MAPK signaling pathway
tfd04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113653329 (cacna1ba)
04020 Calcium signaling pathway
113653329 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113653329 (cacna1ba)
Ion channels [BR:
tfd04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113653329 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
113653329
NCBI-ProteinID:
XP_027018650
LinkDB
All DBs
Position
9:4981720..5111321
Genome browser
AA seq
2288 aa
AA seq
DB search
MARFEDDLPVRYAGGSPSAAGRVPSRQQGPPGAPRVYKQTMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNVIRKYAKRVTEWPPFEYMILATIIANCIVLALEQHLPADDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTTVGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRACFRNDTNELVAEFPCGLEPPAHVCENGTTCREYWPGPNFGITNFDNILFAVLTVFQ
CITMEGWVEILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKHAEEKSPLDGAWYKRKCNNPVLKR
SKKSKNDLINAEEGEDHFTDILSVAPQGSPFARASVKSSKNESSSYLRRKEKRVRFFIRR
MVKSQGFYWTVLCLVGLNTLCVAIVHYDQPRWLTYALYLAEFVFLGLFLIEMSLKMYGLG
PRSYFHSSFNCFDFGVIVGSIFEVVWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVGSGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAISKKLALQKAKEVKEVSPMSAASLSLAANYVCSPAHHYLSQEQRRSLKM
MSVWEQRTTQIRKHIRASSEALYNEELNPRLTSTQHLRPDITTHLDRPLVVEPRCDWDKP
RDLRVEAGTPEDPNLQATPDPLSMEPPQSQPPRKHHHRRRERTSNEGRENGENGASRHHV
HHSRSKETEGTRAKDGKTERSHSRDARAEHRHHRSHRAGHEGNGIVGAKSERRSHHREGS
RSARGDGERSSRGEEGGNGGRRRHRQRAGKVQSSLEGGEQRENGDREESKPPENRQTELG
GDMLPAPSQQLAVGNRWGLEKPEDSDNQRNVSRIGGLGVHIPVTITSPPGETTLIAMNSI
DSETAPITEKNLEEVNQSGPRPILPYSSMFIFSPTNPVRRLCHYIVSLRYFEMCILMVIA
MSSIALAAEDPVNANALRNYVLKYLDYVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNI
LDFIVVSGALVAFAFSSFMGSHQSPNRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKA
VFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLERDCRGQFLEYD
KHEVSAQPREWKKYDFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDKGPSPGYRI
EMSIFYVVYFIVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLT
RYMPQNQQSFQYRMWKFVVSPPFEYSIMIMIALNTVVLMMKYYDAPYAYEAMLKYLNIVF
TALFSLECVLKIIAFGPLNYLKDAWNVFDFVTVLGSITDILATEINTTDRLINLSFLRLF
RAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNEDT
AINHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRACDVNSGTPGNECGSDFAYFYF
VSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYKD
MYNLLRIISPPLGLGKNCPNRVAYKRLVKMNMPIAEDTTVHFTSTLMALIRTALEIKLAS
GIMAQRLCDAELKKELATVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRA
KKLQMQQQQFKDQPGPQNNVGALLEPILCPMQEKSRSMMDCPSDILHPISLSSATLNNGH
TLHDNAIKGSSSWASEKTKDVQRSKKRPMLRGQSVDISNTNTAQVSVEMRKMENNANTIQ
QPAGLEGQGRAVSMPKLNAEMQRSHSRHSPGTLLAPIPDSPLRRSVSTFSSQRPPEVTVN
DYILEKPAQERPHHHHHHHRCHHRKDREKKQRSLDRSPGGQPNSTGGTAADSAGNSSFQE
RGQDRGRSHERKHHSSAAEKQRYYSCDRYGSREHFPTKPAPASCATSPGEAQETTFTKQG
SGWAKGSLVLLSSGSSTPSRWRRQLPQTPVTPRPAVTYRTANSSPVSSAVAQNTLPPPSP
VMRISSEPYLRPQTTLPSPQQIVTLPTLSQHSLLGMPNGYHYIMGMGTGGSSDNIQRYYP
EAEKEEWC
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtttcgaagacgacctgccggtccggtatgcaggcggctctccgtcggctgcg
ggccgagtgccgagcaggcagcagggccccccgggtgcccccagggtctacaaacagacc
atggcccagcgagcccgtaccatggccatctacaaccccatccctgtcaaacagaactgc
ctcacagtcaaccgctctctcttcatcttcagcgaggataacgtgattcggaagtacgcc
aagagagtcaccgagtggcctccatttgagtacatgatcctcgccaccatcatagccaac
tgcattgtcctggctttggagcagcatttacctgcggatgataaaaccccaatgtccgag
cgcctggatgacacagagccctattttattggcatattttgctttgaggctgggattaag
atcattgcacttggctttgcttttcataaaggctcctacctccgtaacggctggaacgtg
atggatttcgtcgttgtgctgacggggattttgaccaccgtcgggacagattttgacttg
cggacactcagggcagtgcgagtactacggccactcaaactggtgtctggaattcccagt
cttcaggtggtcctgaagtccatcatgaaagccatggtgcctctgctgcagatcggcctg
ctgcttttctttgcaatcctcatgtttgccatcattggtctggacttctacatgggcaag
ttccatcgtgcctgcttcaggaacgatactaatgaactggtggctgagttcccatgtggc
ttggagcctccagcacatgtctgtgagaacggcaccacatgtcgggagtactggcctggc
cccaactttggcatcaccaactttgataacatcctcttcgccgttctcacagtcttccag
tgcattaccatggagggctgggtggaaatcctttacaatgccaacgatgcctcagggaac
acctggaactggctgtacttcatccccctcatcatcattggctccttcttcatgctgaac
ctggttctgggagtgctatcaggagagtttgctaaggagcgggaacgtgtggaaaagagg
caggagttcctaaagctacgcaggcagcagcagattgagcgagagctcaccggctacctg
gagtggatctgtaaagcagaggaagtcatgctcgctgaggaggacaagcatgcagaggag
aagtctccactggacggtgcctggtacaagaggaaatgcaacaacccagttctgaaacga
tccaagaagagcaagaacgacctgatcaacgcagaagaaggggaggatcatttcacagat
atcttgtcagtcgcaccccagggctccccttttgctcgggccagcgtgaagagcagcaag
aacgagagctcttcgtatttgcgcaggaaagaaaagcgagtgcgttttttcatccgccgc
atggtgaagtctcagggcttctactggacggtgctgtgtttggtgggtctgaacacgctg
tgtgtggctatagtgcactacgaccaacctaggtggctcacctacgctctctatctggca
gagtttgtattcttgggcctgttcttgattgagatgagtctgaagatgtacggcctcggc
cctcggagctacttccattcttccttcaactgtttcgactttggcgtgattgtagggagt
attttcgaggtggtatgggcggcagttaaacccggggcgtctttcggcatcagcgtgtta
cgagctcttcggctgctgaggatcttcaaggttacaaagtattggaactctttgaggaac
ctggtggtgtctctgctgaactctatgaagtccatcatcagcctgttgttcctcctgttc
cttttcattgtggtgttcgctctgcttggaatgcagctctttgggggacagtttaatttt
gaagacgagaccccgacaacgaactttgacaccttcccagcagcaattctgacggtgttc
cagattctgacaggagaagactggaatgcagtgatgtaccatgggatcgaatctcaggga
ggagtgggcagtggcatgttctcctcagtctacttcatcgtcctcacgctgtttggaaac
tacactcttcttaacgttttcctggctattgctgtcgacaaccttgcaaatgcacaggaa
ctcacaaaggatgaagaggaacaggaagaggctatcagtaagaaactggctctccagaag
gctaaagaggtgaaggaagtcagccccatgtcagctgctagcctttctctcgcagcgaat
tatgtctgctcccccgcccatcactacttgagccaagagcagcggcgctcgctgaagatg
atgtccgtatgggagcagcgtaccacacagatccgtaagcacatcagagccagcagtgaa
gccctgtacaacgaggaactcaaccctcgcctgacctccacccagcacctacggccagac
atcaccactcacctggaccggccgctggtagttgagccgcgatgcgactgggataagccc
agggacctgagagtcgaagcaggtacacctgaggaccccaacctgcaggcaacccctgat
cccctctccatggagcctcctcaatcacagcccccacgtaaacaccatcaccggagacgt
gaaagaacttccaacgaaggcagagaaaatggtgaaaatggagcctcacgtcatcacgtg
caccacagccgcagcaaggagactgaaggaacacgagccaaagatggcaagaccgaacgc
agccacagccgtgatgcgagagcagaacacagacaccaccggtcgcatagggcaggacat
gagggcaacggtattgttggcgccaagagtgagagacgctcgcaccacagagaaggctca
cgctcggccaggggggacggggagaggagctcacgaggggaggaggggggcaacggaggc
cggaggaggcaccggcaacgggctggcaaggtgcagtcttcactagagggtggggagcag
agggagaatggagatcgagaagagagcaagcctccagaaaacagacaaactgaactgggt
ggagatatgctgcctgcaccttctcagcagcttgcagtggggaaccggtggggtctggag
aaaccagaagattcggataaccagcgaaatgtcagtcgcataggaggcctgggggtccac
atccccgtcaccatcacttctccacctggagagaccactctcatagccatgaacagtata
gacagtgagacggcacccataactgagaagaacctggaggaggtgaaccagagcgggcca
cgtcccatacttccttacagctccatgtttatcttcagcccaactaatccggtgagacgt
ttgtgccattacattgtaagtctgcgttactttgagatgtgtatcctgatggttatagcc
atgagtagcattgcactggctgcagaagacccagttaatgccaacgctctgcggaactac
gtcctgaagtatttggactacgttttcaccggtgtgttcacatttgaaatggtaattaag
atggtagatttgggcttgctgctgcatccaggctcctacttcagagacttgtggaatatt
ctggacttcattgtggtcagtggagctctggtggcattcgctttctcgagcttcatggga
tcgcatcaaagcccaaacagagggaccaaaggaaaagacatcagcaccatcaagtctctc
agggtgttaagagtcctgcggccattgaagacgatcaaacgcttaccgaagctgaaggct
gtgttcgactgcgtggtgaactccctgaagaacgtgctgaacatcctcatcgtctacatc
ctcttcatgtttatcttcgccgtcattgctgtacagcttttcaagggcaagttcttttac
tgcacggatgaatccaaaggcctagagagggactgcagagggcagtttctggagtacgat
aaacacgaggtctcggctcagcccagggagtggaagaaatatgactttcattatgataat
gtgctgtgggcttttcttacactcttcactgtgtcaacaggagagggctggcctacggtt
ctgaagcactctgtggatgccacctttgaggacaagggtccaagtcctggttaccgcatc
gagatgtccatcttctacgtggtctactttattgtcttccctttctttttcgtcaacatc
ttcgtggccttgattattatcacgttccaggagcagggcgacaaagccttgtccgagtgt
agtctagagaaaaacgagagagcctgtatcgactttgccatcaatgccaaaccgctgaca
cgctacatgccccagaatcagcagtctttccagtaccggatgtggaagtttgttgtttca
ccaccttttgaatactccatcatgatcatgatcgcactcaacaccgtggtcctcatgatg
aagtactacgacgcaccgtacgcctacgaagcaatgctgaagtatctcaacatcgtcttt
actgcccttttttcactggagtgtgttctgaagatcattgcttttggtccactgaactac
ctaaaggacgcatggaatgtcttcgactttgtgacagtgctggggagcatcacggatatc
ttggctactgaaattaatactacggatcgtctgataaacctaagcttcctgaggctgttc
cgagccgcccgtctcatcaagctcctccggcagggttacaccatccgcatcctgctttgg
acgtttgtgcagtcctttaaggctcttccttatgtctgccttctgatcgctatgctgttc
ttcatttatgccattataggaatgcaggtctttggaaacatcgacctgaatgaggatacg
gccatcaaccaccacaataacttccgcactttcctacaagctctcatgctgctcttcagg
agcgctacaggagaggcctggcacgagatcatgctgtcatgtctgagtcaccgtgcatgc
gatgtgaactcgggcacgccgggaaatgagtgcggcagcgactttgcctacttttacttt
gtctccttcatcttcctttgctctttcctgatgctgaatctgtttgtggctgtgatcatg
gataattttgaatacctgacccgggactcctccatcctgggtccccaccacctggacgag
ttcatccgcgtgtgggctgagtacgacccggccgcatgcggacggatttcctataaggat
atgtacaatttgttgcgaattatctcaccccctcttggcttagggaagaactgccctaat
agggtagcatacaagcgtctggtgaagatgaacatgcccatcgcagaagacacaacggtc
cattttacctccacgctcatggctcttatccgcaccgcgctggagatcaaactggcctca
ggaatcatggctcagcgtttatgtgatgcggagctaaagaaggagctggcaaccgtctgg
ccaaacctgtctcagaagaccatggatctgctggtgactccccataaacctaacgagctg
acggttgggaaagtctatgcagccctcatgatcttcgactactacaaacagaacagagcc
aagaaactgcagatgcagcagcagcagttcaaagatcagccaggacctcagaacaatgtg
ggagctctcctggagcccattctgtgccctatgcaggagaagagcaggagcatgatggac
tgtccatcagatatcctgcatcccatcagtctcagctctgcaactctgaacaacggacac
acactccatgacaacgccattaaaggctcctcgtcttgggcttcagagaaaaccaaagac
gttcagaggtcaaaaaagcgacccatgctgagaggccagtcagtggacatctcaaacaca
aacactgcccaggtgtcagtagagatgagaaaaatggagaacaatgccaacacaatccaa
caacctgctggtttagagggtcaaggacgagcagtatctatgcccaaactcaatgcagag
atgcagagaagtcattcgcgtcactctccaggaaccttacttgcgccgattcctgattcc
cccctgaggcgatcggtgtccaccttttcctcacagcgtcctccggaggttactgtgaac
gattacattctggagaagcctgcacaagagagaccgcatcaccatcatcatcatcaccgc
tgccatcaccgaaaagacagagagaagaagcagaggtcgctggataggtcacctggtgga
caacctaatagtacaggtggcacagcggctgactctgcgggaaactcctcatttcaggag
agagggcaagaccgaggccgttcccacgaaaggaaacaccattcgtcggcagcggagaag
caacgctactactcgtgcgatcgctacggcagtcgagagcattttcccaccaaaccagcg
ccagccagctgtgccacctcacccggagaggctcaggagaccaccttcaccaagcagggc
agtggttgggctaaagggagcctggtgttgttgagttcgggctcgagcacgcccagccgc
tggcgcaggcagctgccccagacgcccgtgacccctcgcccagcggtgacctacaggact
gccaactcctcccctgtgtcctctgcagtcgcccagaacaccctccctcccccgagcccc
gtaatgcgcatcagctctgagccgtacctccggccccagacaacgctgccgagcccacag
cagatcgtgacgctcccgacgctatcccagcattccctgctcggtatgcccaatgggtac
cattacattatgggcatgggcactggcggcagcagcgacaacatccagcgttactaccct
gaagcagagaaggaagaatggtgctag
DBGET
integrated database retrieval system
