Tachysurus fulvidraco (yellow catfish): 113653331
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Entry
113653331 CDS
T08119
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113653331 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113653331 (ppil2)
03110 Chaperones and folding catalysts [BR:
tfd03110
]
113653331 (ppil2)
04121 Ubiquitin system [BR:
tfd04121
]
113653331 (ppil2)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
113653331 (ppil2)
Spliceosome [BR:
tfd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113653331 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
113653331 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
113653331 (ppil2)
Chaperones and folding catalysts [BR:
tfd03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
113653331 (ppil2)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
U-box type E3
113653331 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
113653331
NCBI-ProteinID:
XP_027018666
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All DBs
Position
9:4428991..4463861
Genome browser
AA seq
525 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTNFYGGKKAEIPKSDFRRLPFDHCSLSLQPFEYPMCTEEGVV
FDLMSIVPWIKKFGTNPISGEKLEAKSLIKLNISKNSEGKYHCPVLYSVFTNNSHIVANK
VTGNVFSYEAVEQLNIKTKSYKDLLTDEPFTRQDIITLQDPTNLDKFNVSNFFHVKNNMK
VLDPDEEKAKQDPAYHLKSTNLETRETLAELYKEYKGDELLASTMKEPEAKKTDKFNAAH
YSTGRVSASFTSTAMTPATAHVADAIADDTVRYQYVKKKGYVRLHTNKGDLNLELHCDKV
PKAGENFIKLCKKGYYDGTIFHRSIRNFMIQGGDPTGTGTGGESYWGKPFKDEFKPNLSH
TGRGVLSMANTGPNTNKSQFFITFRSCTYLDKKHSVFGRVVGGFETLTAMENVESNPKTD
KPKTEIKLISTSVFVDPYEEADAQIAAEREKEAQKQEEERAQTSASISKVKTEQEPKKYR
AGVGKYINMAVTKRAATDEDSKPSSSETAAKKPKGRTGFGDFSSW
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccagaaagataagatgtacatcacctgtgcagagtacactaac
ttctatggagggaagaaggcagaaattcccaagtctgacttcaggcgattgcccttcgac
cactgcagtttgtctcttcagccattcgagtatccgatgtgtaccgaagaaggcgtggtg
tttgacctcatgagtatagttccctggatcaagaagtttggaacgaaccccatctcagga
gagaaactcgaggccaagtccctcatcaagctcaacatcagcaagaacagtgaagggaag
taccactgccccgttctgtacagcgtcttcaccaacaactcacacatcgtagccaacaaa
gtcaccggcaacgtcttctcatacgaggctgtagagcagctcaacatcaagacaaagagt
tacaaagacctgctgactgatgagccgtttactcgccaggatatcatcacattgcaggac
ccaaccaatttggataaattcaacgtctcaaatttcttccatgtgaaaaacaacatgaaa
gttttggatccagacgaggagaaagccaagcaggacccggcgtatcacctgaagagcaca
aacctggagacacgtgagactctggccgagctctataaggagtataagggcgatgagctg
ctggcttctaccatgaaggagcccgaggccaagaagaccgacaaattcaatgcagctcat
tactccacaggtcgagtctctgcctctttcacctccactgctatgactccagccacagca
catgtagcagatgccattgcggatgacacggtgcgctaccagtatgtgaagaagaaaggc
tatgttcgccttcataccaacaaaggagacctgaaccttgagctgcactgtgataaggtt
cctaaagctggtgagaactttataaagctgtgtaagaaaggctactacgatggaaccatc
tttcaccgctccattagaaacttcatgattcaaggtggagacccgacaggcaccggtaca
ggtggcgagtcgtactggggtaaaccatttaaggacgagttcaagcccaatctctcacac
acaggccgtggtgtgctcagcatggccaacactgggcccaacaccaacaaatctcagttt
tttataacattccggtcgtgcacctacctggacaaaaaacactccgtatttggcagggtg
gtgggtggattcgagaccctcacagccatggagaacgtggagagcaatccgaaaacagat
aaacccaagactgagattaagctgataagcacttctgtgtttgtggatccatatgaggag
gcagatgcacagattgcagctgagcgtgagaaggaagctcagaaacaggaggaagaaaga
gcgcaaacatcagcatcaatcagcaaagttaaaactgaacaagaacccaaaaagtatcga
gccggagtgggcaaatatattaacatggctgtcactaagcgtgcagcgaccgacgaggac
agcaaaccatctagcagcgaaacggcagctaagaagcctaaaggcaggacgggattcgga
gacttcagctcctggtaa
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