Tachysurus fulvidraco (yellow catfish): 113653349
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Entry
113653349 CDS
T08119
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03030
DNA replication
tfd03410
Base excision repair
tfd03420
Nucleotide excision repair
tfd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113653349 (rfc5)
03410 Base excision repair
113653349 (rfc5)
03420 Nucleotide excision repair
113653349 (rfc5)
03430 Mismatch repair
113653349 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfd03032
]
113653349 (rfc5)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113653349 (rfc5)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113653349 (rfc5)
DNA replication proteins [BR:
tfd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113653349 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
113653349 (rfc5)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113653349 (rfc5)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113653349 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
113653349 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
AAA_14
ResIII
AAA_16
RuvB_N
AAA_assoc_2
DEAD
DUF815
PhoH
AAA_7
ATPase_2
AAA_5
AAA_19
AAA_30
TIP49
TniB
nSTAND3
DNAX_ATPase_lid
AAA_2
Thioredoxin_6
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
113653349
NCBI-ProteinID:
XP_027018709
LinkDB
All DBs
Position
9:4238078..4245654
Genome browser
AA seq
332 aa
AA seq
DB search
MASTSKLQARNLPWVEKYRPQTLDDLISHQDILSTIQKFMNEDRLPHLLFYGPPGTGKTS
TILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDEAD
AMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQCQMIPRLEH
VIQQESIDITPDGMKAIVTLSTGDMRRSLNILQSTHMAYGKVTEETVYTCTGHPLRSDIA
NILDWALNKDFTAAYNQILQLKTLKGLALHDILTELHLLVHRVDFPPAIRMALLIKLADI
EYRLASGTSEKIQLSSMVAAFQAVRDLVVSDG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaagcaagcttcaggccaggaatttgccatgggttgaaaagtacagacca
cagacgctggatgatttgatttcacatcaggatattttgagtacaattcagaagttcatg
aatgaagaccggctgcctcacctgctgttttacgggcctccaggaacaggaaagacctcc
accattttagcctgcgctaagcagctctacaaggataaagagttcaactccatggttctg
gagctcaacgcttcagacgatagaggtatagacgtggttcgaggccccatcctcagcttc
gccagcaccaggaccatattcaagaagggttttaagttggtgattctggacgaggcggac
gccatgacccaggatgctcagaacgctttaaggagagtgattgagaagttcacagagaac
actcggttctgtctgatctgtaactacctgtctaaaatcatccctgctctgcagtctcga
tgcacacggttccgtttcgggcctctgtcccagtgccagatgatccccagactcgagcac
gtcatccagcaggagagcatcgacatcactccagatggcatgaaggctattgtgactctg
tcaacaggagacatgaggcgatcgttaaacattctacagagcactcacatggcctatggg
aaggtgacggaggagacggtttacacgtgtacaggacatcctctgcgttcagacatcgcc
aatatattggactgggccttgaataaagacttcaccgctgcatataaccaaatcctgcag
ctgaagacgctgaaaggtttagcgctgcacgacattctgaccgagctgcatctcctcgta
cacagagtggattttcctccagccattcggatggctttgctgattaagcttgcagacatc
gagtatcgcctggcttctggaaccagtgagaagattcagctgagttcaatggtggctgct
ttccaggcagttagagatctagtcgtcagtgatggatag
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integrated database retrieval system
