Tachysurus fulvidraco (yellow catfish): 113653374
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Entry
113653374 CDS
T08119
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04020
Calcium signaling pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113653374 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113653374 (grin1b)
04082 Neuroactive ligand signaling
113653374 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113653374 (grin1b)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113653374 (grin1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
CoA_binding_2
DUF3663
Motif
Other DBs
NCBI-GeneID:
113653374
NCBI-ProteinID:
XP_027018737
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All DBs
Position
9:4872326..4904997
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AA seq
937 aa
AA seq
DB search
MRLVLFAFLVSCSCARGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANNIYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSYDNKRGPKAEKVLLFSPDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPKGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVMMNTQRKIIWPGGDTEKPRGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEHTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDGKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDSKKKASFRSIS
TNLASNIKRRRSSKDTPYPTDITGQLNLSDPSVSTVV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctcttcgccttcctcgtgtcctgctcgtgtgcacggggaggctgcgag
cccaagatcgtcaacatcggcgccgtgttgagccagaagcggtacgaacaggtgttcaag
gacgcggtgacccaggccaacaatatctacggcaaagacaagttcaagatgaacgcgatc
tccgtcacgcacaagcccaacgccattcagatggcactgtctgtgtgtgaggatctcatc
tcaaaccaggtctatgccattttggtgagtcatcctccccagtccaatgaccatctaacc
ccgacaccagtgtcctacacagctggattctatcgcatacctgtagtgggactgaccacc
cgcatgtccatctactcagacaagagcatccatctgtcgttcttgcgcacggtgcctcct
tactctcaccaggctcaggtgtggtttgacatgatgcgagaattccgctggaatcacatt
atcctgatcgtgagcgatgaccacgagggccgtgcagcacagaagaggctggagactctc
ctggaggagagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagtgctcttgttcagcccagacacaaat
ctgactgcactgctccaggaggccaaagagctggaggcaagagtcatcatcctgtctgcc
agtgaggacgaagcagcggccatttacaaagctgctcgccagctgaatatgaccggctcc
ggttacgtgtggctggtgggagaaagggagatgtctggtaaagcactaagtgaagctcca
gatggcttgctcggcctccagctgatcaacggcaagaacgagtcggcgcacatctacgac
gccgtggccgtggtggcccagtccatccaggagctcttcgagaaggagaacatcaccgag
cctccgaaaggatgcgtgggcaacacaaacatctggaagaccggcccactcttcaaacga
gtactgatgtcatccaagtatccagatggcctcacaggccgggtggagtttaacgatgat
ggagacaggaggttcgcccactacagcatcctcaactaccagaagacccggttggtccaa
gtgggcgtctataacggctcacaagtcatgatgaacacacagaggaagatcatttggcca
ggaggagacactgagaagccaagaggctatcagatgtcaacaagattgaagatcgtgacc
attcatcaggagccgtttgtgtacgtgaagccgacgctgcgagacggaacctgtaaagaa
gaacacaccgtgaacggagtgctgatcaaaaaagtcatctgcactgggcccaacgagacg
attcctggtcgtcccatagtgcctcagtgctgttatggattttgcatcgatctcttgatc
aagctcgcaatgacaatgaacttcacctacgaagtgcacctagtggctgatgggaaattt
ggcactcaggagcgtgtgaataacagcaataagaaggagtggaacggcatgatgggagag
ctgctgggtggcctggcagacatgatcgtggctccacttaccatcaataatgagcgagcc
cagtacatcgagttctccaaaccatttaagtaccaggggctcaccattcttgtcaaaaag
gaaatacctcgcagtacgctggactcgttcatgcagccctttcagagcactctttggtta
ctggtgggtctttcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccatttggaaggtttaaagtgaatagtgaagaggaagaagaagacgccctcaccttatcc
tctgccatgtggttctcttggggggtacttctgaactctggtattggagaaggtgcccca
cggagcttttcggcaagaattttaggtatggtgtgggctggttttgctatgattatagta
gcatcttatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagataaattcatctacgccacggtg
aagcagagctctgtggacatttacttccggcgtcaagttgagctgagcaccatgtaccgc
cacatggagaagcacaactacgagagcgccgctgaggccatccaggctgtgcgagacggc
aaactccatgcttttatctgggattcagccgtgttggagtttgaagcctcgcagaagtgc
gacctggtcaccaccggagagttgttcttccgttcaggcttcggcatcggcatgcgcaaa
gacagtccttggaagcagaatgtttccctggccatcctcagctctcatgagaatgggttc
atggaggaccttgataaaacatgggtgagataccaggagtgtgactccaggagcaatgcc
ccagccacgctcacctttgagaatatggcaggcgtgtttatgcttgtggctggcggcatc
gttgccgggatcttcctcatcttcatcgagattgcatacaagcgccacaaagatgctcgc
aggaagcagatgcagttggccttcgcagcggttaacgtctggaggaagaacctacaggat
aggaaaagtggtagagcagagcccgactccaaaaagaaagcctcttttaggtccatcagt
accaacctggcctccaacatcaagagacgtaggtcctccaaagacacgccatatcccacg
gacatcaccggccagctcaacctgtctgacccttccgtcagcacggtggtgtga
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