Tachysurus fulvidraco (yellow catfish): 113653539
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Entry
113653539 CDS
T08119
Name
(RefSeq) integrin alpha-M-like isoform X1
KO
K06461
integrin alpha M
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagosome
tfd04514
Cell adhesion molecules
tfd04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113653539
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113653539
09142 Cell motility
04810 Regulation of actin cytoskeleton
113653539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113653539
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113653539
04515 Cell adhesion molecules [BR:
tfd04515
]
113653539
04090 CD molecules [BR:
tfd04090
]
113653539
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
113653539
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
113653539
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113653539
Cell adhesion molecules [BR:
tfd04515
]
Integrins
Integrin alpha subunits
113653539
CD molecules [BR:
tfd04090
]
Proteins
113653539
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
113653539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Copine
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
113653539
NCBI-ProteinID:
XP_027018995
LinkDB
All DBs
Position
8:23966549..24016082
Genome browser
AA seq
1133 aa
AA seq
DB search
MDWNLALYMFLISVSQSVLAFNIDPNPWKDFTQPQNIAFGYKVIQRDRDSVIVSDPLLQS
QNQRGKVYTCAVSNGQCSPMQINVPSEAVNMSLGLSMTKDRRSTNVVVCGPTIPKDCKQF
TSYNGMCFKLGSNSPIPRTLRDCPSRTDIAFLLDGSGSVSESDFTIMKEFVINMINEFKD
RDFQFAVAQFSLNSVIHVQFNTFSSTEQIRTIRQLRGRTHTASAINKVVDEVFTIMAGAR
ENANKVLVVITDGQSNDRIPLPDAVQNAERKNIIRYAVGVGNAFQTNAAEQELNTIASDP
DNKHVFKVDDFSVLKEIQKTLEANIIAIEGTQASGDSTRMEFAQDGFTADFDENSNMIMS
AVGAFQWKGGYQKYSSTSGTPLNSFQKGNGNESYLGYSMVVAQTSFGQFYIIQGAPRDKH
MGAVIIYNGDNVFQALYPPEPQIGAYYGAELCVVDLNRDNITDLLLVSAPMYTEKDQEGK
VFIYTFQGSFGSQLQYIRAVKGIQGQRGRFGLTLASPADLNEDSLVDVVVGAPLEENNQG
SIYIFNGRNEDIAPTFSQRITGSSVRNGLQFFGISLSPSALDLSKDQLPDLAVGSKGAVL
LLRSRPTVDLQNTVTFSPSKIPTKDVNCNKPLTNTVKLCFKMTRPNNDKQDLSAKINYTL
TLDAKRQSYRAYFSEKKRILTDTIDVLLQERCKEHVFSLEACPNDALNPIINELKYTFEG
LPLNQQDNLRPILRPNTKTTSDYNLDFEINCGDDNICIDNLKVDFNFSGYSVIQVGIIQE
LNVTVSIVNRGENSYNSRVILKYPFGLSFRRSGTKEGRVECESVDSDEKATLGTTTCFIS
KPIFKNNGLAIFDVTYSINRESNFDRMMKFTASASSDNDKHSPNNELFREKTIDVKYAIY
VAMIRHENSTIHINFTAGQNNLEKPLHQIFKVENFLRDLSFNIFIRVPIKLGVKDIWTNN
NLEIQGCSADNDEQPTIQDFVTALKKQPEVNCSVAVCRVFKCAASLIKNQAIYYSISGNV
SSGWLEQIGLKSAIFELVSTATLDYNETTYIYSPSGSINTAPIGKVNTQVELYEEKFPLK
EVIGGGVGGIMLLAVITAVLYKTGFFKSNYKTMLEEAGAAAGDGGTGDGLVAE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggactggaatcttgcattgtacatgttcctgatttctgtatctcagtcagtgttggct
ttcaacattgatccaaatccatggaaagattttacccaaccacaaaacatagccttcggg
tacaaggtgatacagagagatcgtgacagtgtgattgtgagtgatccattactccaaagt
cagaatcaaagagggaaagtctacacgtgtgctgttagtaacggacaatgttcaccaatg
caaattaatgttccctctgaggctgtcaacatgtcacttgggttgtcaatgactaaagat
cgcaggtctacaaacgtagtggtctgtggcccaaccattcccaaggactgtaagcagttt
acttcttacaatggcatgtgttttaaactgggttccaatagtcctataccacgcactttg
agagattgtccatcaagaacagacattgctttcttgctggatggctctggaagtgtcagc
gagagtgattttactataatgaaggaatttgttataaacatgattaacgagttcaaagac
agagattttcagtttgcagttgcacaattttctttaaacagtgtaatacatgtacaattc
aacacgttttcaagcactgaacaaatacgtacaatcagacaattgcgtggtaggacccac
acagcctctgctatcaacaaagttgtggatgaagtatttaccattatggcaggggccaga
gaaaatgctaacaaagtgttggtggtcatcactgatggccaatcaaatgatagaattcca
ctgccagatgctgttcagaatgcagagaggaagaacattattcgctatgctgtaggggtc
ggcaatgcctttcaaactaatgcagcagaacaagagttgaatactattgcgtcggatcca
gacaataaacatgtatttaaagtggatgacttttctgtattaaaggaaattcaaaaaaca
ctggaagcaaatatcattgcaattgagggaacccaggcttcaggagactccaccaggatg
gaatttgcacaggatggcttcactgcagactttgatgaaaatagtaacatgataatgagt
gcagttggagcatttcagtggaaaggtggttatcagaagtacagcagtacaagtggaaca
ccactaaactcctttcagaagggcaacggtaatgaaagttatctaggttattccatggtg
gtagcacaaacatcctttgggcaattctacatcattcagggagctccaagagataagcac
atgggggcagtgatcatatacaatggagacaatgtctttcaggcactgtatcctcccgag
cctcaaattggtgcctattatggtgctgagttatgtgttgtggacttgaatcgggacaac
atcacagacctcctacttgtttctgctccaatgtatactgagaaggatcaggaaggaaaa
gtcttcatctacacctttcaaggatcttttggttcccagctacaatacataagggcagtg
aaaggcatccagggacaaagggggaggtttggcctgacgctggcgagccctgcagatcta
aatgaagacagcctggtggatgtagtggtaggagcacctctagaagagaataaccagggc
agcatctacatctttaatgggagaaatgaagacattgccccaaccttctcccagagaatc
acaggctcgtctgtgcgcaatggactgcaattttttggtatttctctgagtccatctgct
ctggaccttagtaaagaccaactgccagatcttgctgtcggttccaaaggagctgtcttg
cttttaagatccagacccactgtggatttgcagaacacagtaactttcagcccgtccaaa
attcccaccaaagacgttaactgcaacaaacctttaacaaacacagtaaaattgtgtttc
aaaatgacgaggccgaataatgacaaacaagatttgtctgcaaagataaactatacatta
acgcttgatgccaaacgacagagctaccgggcctacttttcagaaaaaaaacgtattcta
actgacaccatagatgtgttgctacaagagagatgcaaggaacatgtattcagtctagag
gcctgccctaatgatgcactaaacccaataattaatgagttaaagtatacatttgagggt
cttcctcttaatcaacaggataatttgcgaccgatactgcgacctaatacaaagactacc
tcagattacaacctggattttgaaataaactgtggagatgataacatctgcattgataat
cttaaagtggattttaatttttctggatactcagtcatacaagttggaataattcaagaa
ctgaatgtaactgtttccatagtgaacagaggggaaaattcctacaacagtcgagtaatt
cttaagtacccttttggactatctttcaggagatctggcactaaagagggtagagtggag
tgtgaatccgtggatagtgatgaaaaagctacactggggacgacgacttgtttcatcagt
aaaccaattttcaagaataatggtttggctatctttgatgttacatatagcataaacaga
gaaagtaactttgacaggatgatgaaattcactgcatctgcttccagtgacaatgacaaa
cattcacctaacaatgaactcttcagagaaaaaaccattgatgttaaatatgccatctac
gttgcgatgatcaggcatgaaaattccactattcatatcaactttactgcaggacaaaat
aaccttgagaaaccactccatcaaatattcaaggtggaaaatttcctcagggatttgagc
ttcaacattttcatcagagtacccataaaattaggagttaaggacatctggactaataac
aatttggagattcaaggctgcagtgcagacaacgatgagcaacccacaatccaagatttt
gtaacagcactgaaaaaacagccagaggtgaattgctctgtagctgtgtgcagagtgttt
aaatgtgctgcaagtctcattaaaaatcaagcaatatactacagcatctctggtaatgtc
agctctggatggcttgaacagataggactgaaatcagccatttttgagctggtcagtaca
gcaaccctggactacaacgaaacaacatatatctactccccctctggttctataaacact
gcacctattggcaaggttaatacccaggtggagctgtatgaggagaaattcccacttaag
gaggtaattggtggtggtgtaggaggaattatgcttttggctgttatcactgctgttctc
tataagactgggttcttcaaaagcaactataagacgatgttggaggaagcaggagcagca
gccggagacggaggaactggagacggcctcgtggcagagtga
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