Tachysurus fulvidraco (yellow catfish): 113653668
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Entry
113653668 CDS
T08119
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113653668
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113653668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
LIG3_BRCT
CTNNB1_binding
ERCC3_RAD25_C
BRCT_2
Selenoprotein_S
Motif
Other DBs
NCBI-GeneID:
113653668
NCBI-ProteinID:
XP_027019191
LinkDB
All DBs
Position
5:complement(4087007..4116414)
Genome browser
AA seq
983 aa
AA seq
DB search
MSRFLKAVRKYRINPEESELSEDDLQTWGLTGVVLRPYQLLGVQWMEQCMKSLTGCILGD
EMGLGKTCQAISLMVYARGCLHMKGPFLVLCPLVAIDNWKNELKRFFPRMSVVLYSGDID
ERTKKQSNMEKEAFHILLTNFEICLNDAAVLKRWKWSIMMVDEAQRLKNEFSKLHQKLTE
FTVDFRLLITGTPIQNRLEELYSLLSFIQPNDFPPDSAKDFCTTYDSVDTNQTKAEELHR
VLQPFLLCRFKDEVERDLPKKLEVVVYHGMSSLQKKFYKAIRNKDRSVFGQHQGKGNQLT
NIQIQLRKCVCHPYLFNGVESEPFEIGEHLVEASAKLSLLDAMLSQLHEEGHKVLLFSQM
IRMLDILQDYLTYRGYTYERLDGSARAEERSLAIKNFRDEDTFIFLVSTRAGGVSLNLME
ADTVIFYDSDYNPQNDLQAESRAHRIGQRRPVKVFRLLGMGTVEEDIYSHANTKLKLYKA
VIKSGLFPLSRDSQDAAESSEIKKLGVHKRPPSDKSSVSRVNVQQILGQSGDKQWLIDEE
NLRLAEDLEIKTHMYIFEGTDYSISPTEDDDEMIPENSGDEGRSQQHKVKGSVSEELPLK
TRLRSLLTESELEKRRQTEEENAAEKARAQKEKKQQREEQKHKKKMDLWASCGYKSLSLP
SADSEGEDEYEDDYDEEEDNSNVTLADSDIQFVSGDVTHPQAESEDAIIVHCVDDSGKWG
NGGLFTALLRRSVEVKNQYEMAGRMLDLDIGNVLLIPIDDKQSRECGKDFVTLIVAQRRY
KSNKLSGISLTALEEGLKKIYRTAKAKNASVHLPRIGETTKDFNWYGTERLIRKHLASRG
IPTFIYYYKRPAFQSTTRTPSPDTETPSTSSSATSPPEASGTTQWCGLPDFMRGVSVFFY
NIGAAERKQLTRHLIAYDGDKEDIMSSQVTHIVAEVESPAHTQELQDMCQQYPHAILVQK
RWLRSCFVTQKKLSSSKYILKLE
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggtttcttaaagcggttcgtaaatacagaattaatccggaagagtctgagctt
tcagaggacgacctgcagacatggggactaacaggagttgtgttgaggccgtaccagctg
cttggggtgcagtggatggaacaatgtatgaagtctcttacaggctgcatcctgggggat
gaaatgggtttagggaaaacctgtcaggccatcagtttgatggtgtatgcacgaggatgt
ctccacatgaagggtccatttctggtgctctgtccactggtggctatagacaactggaaa
aatgagttaaagcgtttcttccccagaatgtctgtggttttgtactctggtgatatagat
gaaagaaccaagaaacagagtaacatggaaaaggaagctttccacatcttactgactaac
tttgagatatgcttgaatgatgcggcagtattaaaaaggtggaaatggagtattatgatg
gtggatgaagctcagcggctgaagaatgaattttctaagcttcaccaaaaacttacagag
ttcactgtggacttcagacttttgataactggaactcccatccagaatagacttgaggaa
ctctactcgctcctctcctttatccagcccaatgatttcccacccgattctgcgaaagat
ttttgcaccacatatgacagcgtagacactaatcaaacaaaagctgaggagctccacagg
gttctccagcccttcctgctgtgcaggttcaaggacgaagtggaaagggacctgccaaag
aagttggaggtggtggtttatcacgggatgtcttctctccagaagaagttctacaaagcc
attcggaataaggaccggtctgtctttggacaacatcagggcaaaggtaaccagctcacg
aatattcagattcagctcaggaagtgtgtgtgccacccctacctgttcaacggtgtggag
tccgagccatttgaaattggggaacacttggtggaagcgagtgcgaaactctctctgctc
gatgcgatgctttcccagctgcatgaggagggccacaaggttctgttattctctcaaatg
atcaggatgttggatattttgcaggactacctgacgtacagaggttatacctatgagcgt
ctggatggatcggcgcgagcagaagagcgctcacttgccatcaagaacttcagagacgag
gataccttcatcttcttggtcagcaccagggctggcggggttagtttgaacctgatggaa
gctgacactgtaatcttctatgacagcgattataatccacagaatgacctgcaagcagag
tctcgtgctcaccggatcggacagaggaggcctgtgaaagtgttccggttgctggggatg
ggcacggtggaggaggacatttactcccacgctaacaccaaactgaaactctacaaagca
gtgatcaagagcggactgttccctctgtccagagatagtcaggatgctgctgagtcaagt
gaaatcaagaagttaggagtccacaaacggccgccatcagataagagctcggtttcgcgt
gtgaatgttcagcagatactgggacagtcaggagacaaacagtggctgatagacgaggag
aacctcaggcttgctgaggatctggagataaagactcatatgtacatctttgaggggacg
gactactccataagccccaccgaggacgacgatgaaatgattccggagaactctggggac
gagggacgcagtcaacagcacaaagtcaaaggttcagtctctgaagaattaccattgaag
acaagactaaggagccttttgaccgagtcggagctggaaaagaggcgtcagacggaagag
gaaaatgctgctgaaaaagccagggctcagaaagagaagaagcagcagcgtgaggagcaa
aaacacaagaagaagatggatttgtgggcatcatgtggctataaatctctgtccctgccc
tctgctgatagcgaaggtgaggatgaatatgaggatgattatgatgaagaagaggacaac
agcaatgtgaccttagcagactcggatattcagtttgtgagcggtgacgtcacacaccct
caggctgagagcgaggacgccatcatcgttcactgtgtggatgattctggaaagtgggga
aacggtggcttgtttacagctctgttgcgccgttcagtggaggtgaagaatcagtatgaa
atggccggacgcatgttggacctggatatcgggaacgtgctgctgattcccatcgacgac
aagcagtcgagggagtgcggaaaagactttgtgactctgatcgtggcacaaaggagatat
aaaagcaacaagctgtcagggattagcctcactgccctggaggaggggctcaagaagatc
tacagaactgccaaggccaagaatgcaagcgtccaccttccacgaatcggggaaaccact
aaagacttcaactggtacggcactgagagactgatacgcaagcacttagcctcgcgaggc
attcccaccttcatatactactacaagcgtccagcctttcagtccaccacgaggactccg
tctccagacacagagaccccgtctacctcaagctcagcaaccagtccaccggaagcttcc
gggacgacgcagtggtgcggtttacccgactttatgagaggagtcagtgtgtttttctac
aacatcggagcggcggagagaaagcaactcacacgccacctcatcgcgtatgacggagat
aaagaagacatcatgagctcacaggtcactcacatagttgctgaggtggaaagtccagct
catacccaggagttacaggatatgtgtcagcagtatcctcatgccatcctggtacagaag
agatggctgaggtcttgttttgtcacccagaaaaaactctcttcttcaaagtacatcctg
aagttagaataa
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