Tachysurus fulvidraco (yellow catfish): 113653728
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Entry
113653728 CDS
T08119
Symbol
rpp40
Name
(RefSeq) ribonuclease P protein subunit p40
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113653728 (rpp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfd03009
]
113653728 (rpp40)
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113653728 (rpp40)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113653728 (rpp40)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
113653728 (rpp40)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
113653728 (rpp40)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
113653728 (rpp40)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
113653728 (rpp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
DUF1163
Motif
Other DBs
NCBI-GeneID:
113653728
NCBI-ProteinID:
XP_027019313
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All DBs
Position
22:complement(18626094..18631206)
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AA seq
357 aa
AA seq
DB search
MPADLEKCPRSLLVCEKSNFLNEASRHEAHVSKHSFNYKVSLLIPECGVLPADIAKVISK
FSSYYLVRDLPVYRFLEEDMLKIIKKGTFYSLSYKTRLDEDNIIALSSRKLILSLDKDTY
EQLGLEGKPSLYNHRKPMRFVVTVDLTDISLVPGTKRYQQVLMSLKERVPLRSDFLLTDC
RSDQDGHLKALLSQYTYENCRPTLSSHSLTDVLCPSLQSSDLQGKSLSCSPELFLEWLGA
ANLNISCENSATSFLSTYTCPEPRSSVSQALICTVTGLIPPEDISVLLQELRRYFDAPKF
TAWVSLTVHGFVDSPVSWGTTEHGFLKGGDNFYNFVCFKNQDYWLHMATGAHDGCPP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagacttggagaaatgtcctaggagtttgttagtgtgtgaaaaatccaacttc
ttgaatgaagcgtcacgtcatgaagcgcacgtttctaaacatagcttcaactataaggtt
tctttactgatacctgaatgtggagtgctgcctgctgacattgcaaaagtcatcagtaaa
ttcagttcatattaccttgtgcgggacctaccagtgtatagattcctggaagaggacatg
ctcaaaataattaagaaaggcactttttattcgctctcctacaaaacccgtcttgatgaa
gacaatattattgctttatcgagcagaaagttaatattgtctcttgataaggacacgtat
gagcagcttggcttggagggaaaaccatctctatacaatcacagaaagcccatgagattt
gttgtaactgtggacctcactgatatatctttggttcctgggacaaagcgataccagcaa
gttctgatgagtctgaaagaacgagtgccgctgagaagcgactttcttttaacggactgt
cgttcagaccaagatggacatctgaaggctctcctgtctcagtacacatatgagaactgt
aggcctactctcagtagccacagtctgacagatgtgttgtgcccatcacttcaatcctca
gatcttcagggaaagagtctttcatgcagcccagagctgttcctagagtggctgggggca
gccaacctgaatatcagttgtgaaaactcggctacaagtttcctgtccacttatacgtgt
ccggagccacgcagttccgtgagccaggcgctgatttgcacagtaacaggactcattcct
cctgaagacatctctgtgctactacaagaactaagaaggtattttgatgcaccaaagttt
acagcttgggtctccctcactgtgcatggctttgtggatagtcctgtgtcctggggaaca
acagaacatggcttcctcaaggggggagataacttctacaattttgtttgcttcaagaac
caggattactggttgcacatggctactggtgcacacgatggctgtcccccttga
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