Tachysurus fulvidraco (yellow catfish): 113653803
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Entry
113653803 CDS
T08119
Symbol
cica
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113653803 (cica)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113653803 (cica)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
CsgH
Motif
Other DBs
NCBI-GeneID:
113653803
NCBI-ProteinID:
XP_027019432
LinkDB
All DBs
Position
7:complement(13904190..13940428)
Genome browser
AA seq
2484 aa
AA seq
DB search
MKPFKKQGRRSPPSTRAKGSKRKGLIDSSPEEEKRETEEKPRLSPSSPKRLISSNSDSSQ
DELVRAIRTTEREGKREVILDTSGDYGKPKEHSLSFKSGGTQSDRNSPNPPSSRKTATFK
ARVPKKKYTSEHYAGNHANDGNSSTPPQSNSSTPHSCSTSSQCSTTGAEYLDTVNQSNQV
PVANTSGVMQNSMAPQSNRMGDEHTEREKINTSSPQRCSSTDTASEHSADVEVTSQQLGS
HSSVQGGQSHVSPEPPLENLPAGLSQTLAKGLKNQRVLARVSTGRGDKWPPDRGPESSGV
FRAGVVREVSGEHGIVEVQLHGEETLCKYPFRVATDMVDVILDAPPPGHASVPTGTHVCV
PYGGDSAGSDGAQQWYREGLITQVDPHPAVSFPYRVQLQKDPAEKMDRNGPEEDWRGKTA
QAVWVSRQSLRLLVPPWDLELPQHSDHGKDGHRVGIREREWEDKEEIEVESELHHFSMVH
GVTGPVLVTGLLHPEPSSLPLSSSCSVSTAITSVLSITPDRSWDCSRQKELEKERELQRQ
SEKERERERISLQAPAPEEDMEVSHFSMAPLREGSLTLAMGTKTLGVPSQHRPILSKTDY
LSSHLSVVRGIGTTLTPHLSLGPSSVLLGMDATAGTAVISSTPQLPPLPPSSSRSSLEKT
STSSSHGTSGGGSSSSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWRRLCSRE
GCSKESQRRGYCSRHLSMRTKEMEAGGGLGRDRSGASSTGTLTPDLRLGGRTSSEIDWDE
TSHDSSEASSRGGDSRPRLILPSLLPQELPRDLSRFDFDECEAANMLVSLGSSRSGTPSF
SPVSNQSPFSPAPSPSPSPLFGFRPANFSPITAPSSLTPRRPRHLSGTKLGTPSSEQDRH
LSGIMPTFQTNLTFTVPMSPSKRKLDAPPPPLPIAPDYVKSDPQLSDLQLGLNPAAFRAV
SPQSQLNTPSSLSFTRPRSTTSRPSSSAASTPPPMLVSPTPPSPLPQDPSSRRIVPLRDS
PVIVRNPDVPLAKFSDGPLSRRTGSRTREHSQPPHLAVGLQAPIPINRAATNGTVLLRNS
ASTLVLVTSDQSLTTVSAGHQTYSSQSPSCVSSSSIATDPASSGSGRRDQDKKLGDHTDV
QGGILPQPMACHPSPTALLPLILPAESPHPAPRKDIIMGRPGTVWTNVEPRSVQVFPWHS
LVPFLETSQSNSSNHPDGQIQSKEPQCGVTLMTDDQSVAERASPSCPPPSVGDPPAERGG
GDSETESDADDLFYSVGIQDPGLLTGPGKRRTQSLSALPKDSDKKREKDHIRRPMNAFMI
FSKRHRALVHQRHPNQDNRTVSKILGEWWYALGAKEKQKYHDLAFQVKEAHFRAHPDWKW
CNKDRRKSLSEGRGTPGAKETRERSASESTETQSISHRVENKAAGPSCLSTESEHWGGPA
GDQVTRHRALSQNAVHSPERREEEKDLVKNGVCSFKTRPPPISQCGTSDDVTSDEEPMVI
CEEEGDDDVIGDSFPEGSIDLKCKERVTDSDEENDPADETDGKRLVHPLLLSSPGGESAN
KETEDKGDSAESKIKQETEAGELCEGIKEGKGEGGEMGEGGSGQVPKCFTLNGTFLSEPK
ELQVPGTVRTAPTVVTNVVRPVTSAPIAISSKPAEGGMSLEAPSPDGKPKLLIGGGGAAG
SGAIAGGGYFSATSPKPVGQGGLVTGLVLGGSFPNPSTVQLITPPQPLPGHTTSNGAPNN
SALPLSLLQPQFLPAASLTPPTNGKQVTQVQYILPTLPATVPLNSPSTQQTNQSAGVLAL
PTALPTHLSLSNGLHAGAGPGVRYASVPAVGGVSPGGRARSPVLQNKMLVPMTTVRPGST
PSQPISLVAQPLPVQNGVQPGSKLIQIAPMPVVQTNVQPARTVHPAASFPVSMATATVMA
SGGTSPQTVLLTPSATRITYVQSTTSVPTPLSLGSTTAVSTQRAVPPQTQAFLPSAMATL
GFTAIAPAGPTLVHPIVAGQPPLLAQVPSPSCLPQSTASETSRQVVTALYPGPSVTLATG
MVSMTTTSQNVTSPLSVLTSPSSPHMNTSIASNVHLHSQTFTDAQSQVLLKMESLKRPEA
DTHQEAVLSNTSNQMDELGLLASPTPHLHSGSSSASPELPLSPQKIKVQVEHPLSRQEGE
DQDGKKANRVEHDSERDGGGMRSTWVEKAVRDRGTEGAPKSLLTNNKEEHEREAGQKEVF
GLDLPPPPTQSDTPALRKNKSRPPPLKSTTGSVDKVLSDTYFEERLAELPEFKPDDALPS
PSLQNLATSPRAILGSYRKKRNSTDLDSVDDPSSPRRKSRRLSSCSSEPNTPKSAAKCEG
DIFTFDRTAETEDILGELDRVPYSLRRTLDQRRALVMQLFQEQGSFFPSAQATVAFQTRY
SDTFPNKVCLQLKIREVRQKIMQTATPSGSEATGMGGAFSGSDSACAPGPSNPVASEDGV
AEVDEKGCEWEKPKPGMDDSQDLR
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttttaaaaaacaaggcagacgatcacctccatccacacgagccaaagggagt
aagagaaaagggctgattgattcaagtccagaagaggagaagagagaaacagaggaaaaa
ccaaggctctcaccctcctctcctaagagactgatatcctcaaattcagattcatcacag
gatgagctagttagagccatcagaaccacagagagagagggaaaaagagaagtaatactg
gatacatcaggggattatgggaagccaaaggagcattctcttagcttcaagtcaggtgga
acacagagtgatcgcaacagccccaatcccccatccagccgcaaaacagccacctttaag
gcccgtgtgccgaagaaaaagtatacctctgagcactatgctggaaaccatgccaatgat
ggcaattccagtactcccccacagagtaacagcagtacacctcacagctgctccacttct
agtcagtgcagcaccactggagctgaatacttagacacagtcaatcagagcaaccaggta
cctgtggccaacacctcaggggtcatgcaaaacagcatggcaccacagtcaaacagaatg
ggagatgagcatactgagagagaaaagataaatacatctagtcctcagcgttgctcctcc
acagacacagccagtgagcactcagcagacgttgaggtgacatcacagcaacttggatcc
cactccagtgttcaaggaggccaatctcatgttagtcctgagcctccattggaaaactta
ccagctgggctgtcacaaacacttgctaagggtttaaagaaccagagagtcctggccaga
gtgagcacaggaagaggggacaagtggccacctgatagagggccagagtcatcaggggtt
tttcgtgctggtgttgtacgagaagtcagtggagagcatgggattgtggaggtgcagtta
catggagaggaaacattatgcaaatacccattccgagtggctactgatatggtagatgtt
atattggatgcaccccctccaggtcatgcatctgtgcctacaggaacacatgtgtgtgtg
ccctatggaggtgatagtgcaggcagcgatggagcacaacagtggtacagagaaggccta
atcacccaggtggaccctcaccctgctgtctctttcccttatcgtgtccagctccaaaag
gatccagcagaaaaaatggatagaaatggaccagaggaggattggaggggcaaaaccgct
caagcagtttgggtctcaagacagagtctccgccttcttgttccaccatgggaccttgag
ctgcctcaacattctgaccatgggaaggatggtcatagagtggggataagagagagggag
tgggaggataaagaggagatagaagtggaatcagagctgcaccatttcagcatggtgcat
ggggtaacagggccagtcttagttactggactgttacaccctgaaccttcttcattacca
ctctcctcatcttgttcagttagcactgccatcacttctgtactcagcataactccagac
agatcttgggactgcagccgacaaaaagagctggagaaagagagggagttgcaaaggcaa
tctgaaaaagaacgagaaagggaaaggatttctttacaagcgccagccccagaagaggac
atggaggtaagccatttcagcatggctccactcagggagggtagcctcactttagccatg
ggcaccaaaactttgggtgtaccctctcaacatcgacccattctttctaagactgactac
ctcagctctcatctgtcagtggtgagaggtataggcacaacattaacaccccacttatcc
cttggcccctcctctgtgctgttgggaatggatgcaactgcagggactgcggttatttct
tctaccccacagttgcctccactgcctccttcttcatctcgcagctctctggagaaaacc
tctacttccagctcccatggtacatcagggggaggttctagctcatcttcttcatcacgt
tcccgtacacctcttacagctgctcagcagaagtacaagaagggggatgtggtatgcact
ccaacaggaatccgaaaaaagtttaatgggaagcagtggcggcgactgtgctcccgtgag
ggctgctctaaggagtcccagcgacgtggctactgctcccgtcatctgtctatgcgcact
aaagagatggaggcaggaggtggtttgggcagagacagaagtggtgccagcagtacaggc
acgctcacaccggatcttcgcttaggaggtcgtaccagcagtgagattgattgggatgag
acatcacatgacagcagtgaagccagcagtcgtggaggagactcgcgtcctcgtctaatt
ttgccttccctcctcccacaagaactgccacgtgatttgtcacgctttgactttgatgag
tgtgaggcagcaaatatgttggtgtctctgggcagctcacgctcaggtactccgtcattc
tcgcctgtgtccaatcaatcaccattctcccctgccccatctccttcaccatctccactt
tttggttttcgcccagccaatttcagccccatcactgcaccttcatctctcaccccccgc
cgtccacgccatctaagtggtaccaagttgggtacacccagttcagagcaggatcgccac
ctctctggcattatgcccactttccagaccaacctgacttttacagtgcctatgagtccc
agcaagcgtaagttggatgctcctccacccccacttccgattgcacctgattatgttaag
tctgatccccaactaagtgacttacagttgggtctcaatcctgcagccttcagagcagta
tcacctcaaagccagttaaacacaccctcttctctttcttttactcgaccaaggagcaca
accagtcgtccctcatcttctgctgcatccaccccaccaccaatgttggtttctcctaca
ccaccatcaccactaccccaggaccccagctcacgccgtattgttcccctgcgtgattcc
cccgttatcgtccgcaatcctgatgtgccactggcaaaattcagtgatggtcccttgagc
agaagaacaggctcccgcaccagggagcatagtcaaccacctcatctggctgtgggtctc
caggctccaattcctattaacagagctgccacaaatggtacagtactgctccggaactct
gcctccaccttggtgctggtaacctctgaccagtcactaactactgtatcagctggtcat
caaacctactcaagccagagccccagctgtgtttcttcttccagtatagccactgatcct
gccagttcaggctctggaaggagagaccaagacaagaagttaggtgatcatacagatgta
caaggagggattctaccacaacccatggcctgccatccgagtcccactgcgctactgcca
ctcattctaccagcagaatctccgcatcctgcccctcgcaaagacattataatggggcga
cctggcacagtctggactaatgtggagcctcgctcagttcaagtgtttccctggcattca
ctggttccatttctggagaccagccaatcaaattcatccaaccatcctgatggtcaaata
caaagcaaagagccacagtgtggagtaactctcatgactgatgaccagtctgttgctgaa
agagcatcaccctcttgcccgccaccttctgtaggtgatcctccagcagagagaggagga
ggagatagtgagacagagagtgatgctgatgatctcttttactcagttggaatccaagat
cctggactattgactggtccaggaaagagacgtacccaatccctcagcgctctgcccaaa
gacagtgacaagaagagagagaaggaccacatacggcggccaatgaatgctttcatgatc
ttcagcaagaggcaccgtgctctggtgcaccagaggcacccgaaccaggataaccgcaca
gtcagtaagatcctgggtgagtggtggtatgctctaggtgccaaggagaagcagaagtac
catgaccttgccttccaggttaaggaggctcatttcagggctcaccctgactggaagtgg
tgtaataaggacagaaggaagtctttgtctgagggcagaggcactccgggggctaaagaa
acacgagaacggagtgcttctgaaagcacagagacacagtctatttctcaccgggtggag
aacaaagcagcagggcctagctgcctgtcaacagaatctgagcactggggaggaccagca
ggggaccaggtaacacggcatcgtgctttgtcccagaacgcagttcatagcccagagaga
agagaggaagaaaaggatctagtaaagaatggtgtatgttcatttaagactcgcccccct
cctatctcacagtgtgggactagtgatgatgtaactagtgatgaagagccaatggtcata
tgtgaggaagaaggagatgatgatgtcataggtgattcatttccagagggttcaatagac
ctaaagtgcaaagagagagtgacagacagtgatgaagagaacgaccctgcagatgaaact
gatggcaagcggttggttcaccccctcttgctctcatctcctggaggtgaatcagcaaac
aaagagacagaagacaagggggacagtgcagaaagtaagataaagcaggagacagaggct
ggagaactgtgtgaaggaataaaagaaggaaagggagaaggcggtgaaatgggagaagga
ggatcagggcaggtccctaaatgctttaccctaaatggcactttcttatctgaaccaaaa
gaattacaggttccagggacagtccgaacagcccccaccgtagttacaaatgtggttaga
cctgtaaccagtgcacccattgcaatatccagcaaacctgctgaagggggcatgtctctt
gaggctccatcccctgatgggaagcccaagcttctgattggtgggggaggagcagcagga
agtggggccattgctggaggtgggtacttttctgcaacctctcccaaacctgttgggcaa
ggaggtttagtcacaggtttagttcttggaggatcattcccaaacccatccactgttcag
ctcataaccccacctcagcccttgccaggccacaccaccagtaatggagcacctaacaac
agtgccttgcccctttctttgcttcagcctcagttcctcccagcagcttctctcacccct
ccaaccaatggcaaacaagtcacccaggtgcagtacattcttcctacactaccagcaaca
gttcccctaaacagtccctctacgcagcagaccaaccagtcagccggggttcttgccctg
cccactgccctgccaacacacttatcattgtctaatggattgcatgcaggggctgggcca
ggggtgagatatgcctcagtgccagcagtgggaggagtcagcccaggaggaagagcacgg
tctccagtcttacaaaacaagatgctggttcccatgacgacagtaaggccaggatctaca
ccttcacaacctatttccctagttgctcagccactccctgttcaaaatggggtgcaacct
ggaagtaagcttattcagattgccccaatgccagtggtccaaactaatgtccagcctgca
agaacggtacatcctgctgcatctttcccagtctctatggcaacagcaactgtcatggcc
tcaggtggcacatctcctcagacagtgctcctgactccatctgctacaaggattacatat
gttcaatcaaccactagtgttcctacccctttgtcactggggtccacaacagcagtctcc
acacaacgagcagtgccccctcaaactcaagcatttttgccctctgctatggccacactg
ggtttcactgccattgcgcccgctggacctacactggtgcatccaatagtggcgggccag
cctccactcctggctcaggttccatcccccagctgtttgccccagtccacagcctcagag
accagtcgacaggtagtgactgctctgtaccctggcccaagtgtcaccctagcaactgga
atggtttccatgacgactacatctcaaaatgtgactagtcctctgtcagttttgacatcc
ccctcatcacctcatatgaacacatctatagcatcgaatgtgcacttgcattctcagacc
ttcacagatgcacagtcacaagtcttgttgaagatggaaagtcttaaaaggccagaggca
gatacacaccaagaagcagtgttgtcaaacacctcaaatcagatggatgagttaggactg
cttgctagtccaaccccacacctgcattcaggaagtagttcagcgtcccctgaactgcct
ctgagccctcagaagatcaaagttcaagttgaacatcctctgtcaagacaagaaggggaa
gaccaagatggaaagaaggcaaacagagttgagcatgacagtgagagagatggtggagga
atgaggtctacttgggtagagaaagcagtgagggacaggggaacagagggagcgccaaaa
agtctgttaactaacaacaaggaggaacatgaaagagaggctggacaaaaagaggtgttt
ggtttggacctgcctcctccaccaacgcaaagtgacactccagcactcaggaagaacaaa
tcccgtcctccacctctcaaaagcaccactggctctgtggacaaagtgttgtcagacact
tattttgaggagcgcctagctgagctgccggagtttaaaccagatgacgccttgccttcc
cccagcctacaaaatctagctacatctccccgggcaatactcggcagctatcgcaagaag
agaaattcaacagatttggactctgttgatgatcccagctctccaaggaggaagagtcgt
cgattatcgagctgtagctcagaacccaacacacccaagagtgctgccaagtgtgagggg
gacatattcacctttgatcgaactgcagagacagaggacattttaggtgagctggaccgt
gtaccatactctctacgccgcacgttggatcagcgccgagctcttgtcatgcagctcttt
caggagcaaggctccttcttcccatcagcccaggccacagttgctttccagacccgctac
tctgatactttccccaataaagtgtgtttgcagctgaagattcgtgaagtgaggcagaag
atcatgcagaccgccacgcccagtggttcagaggccactgggatgggaggagctttcagt
ggctcagattctgcttgtgcaccaggaccatccaatcctgtagccagtgaagatggtgtg
gccgaggtagacgaaaagggctgcgagtgggaaaagcctaagcctggcatggatgactca
caggatcttagatga
DBGET
integrated database retrieval system
