Tachysurus fulvidraco (yellow catfish): 113653843
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Entry
113653843 CDS
T08119
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113653843
04121 Ubiquitin system [BR:
tfd04121
]
113653843
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
113653843
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113653843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
GSH_synth_ATP
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
113653843
NCBI-ProteinID:
XP_027019481
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All DBs
Position
10:22875218..22878426
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AA seq
635 aa
AA seq
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MAESVSETEELVKKTGATSIIWTWFGFKPSDEQQKNILCRVCGAKVPAKSGNTTNLFYHL
KTKHVVEYHQHCQAMQPTARSSTKNAGQKKQELIQTSIQQSFSKGTPYIRKSPRWIEITR
AITVYLCKDMVPFQTVERRGFKAMIRAIDPRYEVPSRKYFTETEMPKLYAELRENVEKEL
CDLKYFATTTDLWSSRTMEPFLSLTIHYITDDWNLGSRCLQTSYFPAEHSAEEIAQGLKE
ALESWGFKEESQVCITTDNGTNVVKAASLNDWTRLQCFGHRLHLAIEKSMKDPRTDRAVG
VCKKIVSAFSYSWKRRKELKKAQAEHHLPFHRLITDTPTRWGSRQMMIQRVLEQEKALSQ
VLKADKKTKHLVPTWQDTDVLESISRTLGPLLEFTDALSGEDYVSVSYIKPVLHIFNNTV
LAAADDDTELTKDMKRVILEYLNEKYSDPKMVDLLDMASLVDPRFKDAYIADDRQEFIKT
RAVAEILSLLEVQAATVREPLPHTSTEAAADGAEAAEVAVERQSKKVKRSLGSFFKKASS
DGTAALTDREAIKVELKSYLQTMQVDAETDPLDWWRLYQANFPRVARLAQKYLCIPATSA
PSERAFSFGGNIVTCHRSLLKPETVDKLVFLANNL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagcgtcagcgaaacagaggagctcgtgaaaaagaccggtgcaacgtctatt
atttggacttggtttggatttaagccgtctgatgagcagcagaaaaatatactctgtaga
gtgtgtggggcaaaagttccagctaagagtggtaacactactaatctgttctaccacctc
aaaactaaacatgtcgttgaataccaccagcattgccaggcaatgcagccaaccgcaaga
tccagtacaaagaatgcaggacagaaaaaacaggaactgatccaaacctcaatccaacag
tcattttcaaaaggtactccttatattaggaagagcccgcgatggattgaaattaccagg
gccataactgtttacttgtgtaaggacatggtcccttttcaaacggtagagagacgcggc
tttaaagccatgatcagagctattgatccacgatatgaggtgccaagccgcaaatacttc
acagaaaccgagatgccaaaattgtatgccgagctccgcgaaaatgttgaaaaagagctg
tgtgacttgaaatactttgctactacaacggacctgtggtcgagccgtaccatggagcct
ttcctcagtctgaccattcactatataacggatgattggaatcttggcagccggtgtttg
cagacgtcgtacttccccgctgaacattcggccgaggagatagcacaaggactcaaggaa
gcgcttgagtcatggggttttaaagaagaaagccaagtttgcattactactgataacgga
acgaacgtggtcaaggcagcgtctctgaatgattggaccaggctgcaatgctttggacac
agactgcacctcgccatcgaaaaaagtatgaaagacccccgaactgaccgtgctgttggc
gtatgcaagaagattgtgagtgccttttcatactcttggaaaagaagaaaagagttgaag
aaagcccaggcagagcaccatcttccctttcatcggctcatcacagacacaccaacaagg
tgggggtcacgccagatgatgatccagagggtgcttgaacaagagaaggcactatcacag
gtactgaaagcagacaagaaaaccaaacacctggtacccacttggcaagatacagatgtc
ttggaatctataagccggaccctcggcccactgctggaattcacagacgcgctgtctggt
gaagattatgtcagtgtgtcgtacatcaaacctgttctccatattttcaacaacactgtt
cttgctgcagctgatgatgacactgagctgaccaaggacatgaaaagagtcatcctagag
tacttaaacgagaagtactcggacccaaaaatggttgacctgttggatatggcctccttg
gtcgacccacggtttaaagatgcatatatagctgatgaccgccaggagttcatcaagacc
agagcggtagcagaaattctgtcactgttagaggtgcaagctgcaacagtcagagagcca
ctgccacacacaagcacagaagctgcagctgatggtgctgaagctgctgaagtagctgtt
gagaggcaatcaaagaaagtaaaacggagcctgggaagctttttcaaaaaggcctcctcc
gatggcacagctgctctcactgacagagaggccataaaagtggagctaaaaagttacctg
cagacaatgcaggttgatgcagagactgatccactggactggtggcggctgtaccaagct
aattttccaagggtggctagactggcccagaaatatctctgtatcccggccacaagtgct
ccttcagaaagggcatttagctttggtggcaacattgttacatgccaccggtctctgttg
aagccagagactgtggacaagcttgtgttcctggctaataatctttag
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