Tachysurus fulvidraco (yellow catfish): 113653942
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Entry
113653942 CDS
T08119
Symbol
ambra1b
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1B isoform X2
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
tfd04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113653942 (ambra1b)
04137 Mitophagy - animal
113653942 (ambra1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113653942 (ambra1b)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113653942 (ambra1b)
Membrane trafficking [BR:
tfd04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
113653942 (ambra1b)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113653942 (ambra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
113653942
NCBI-ProteinID:
XP_027019643
LinkDB
All DBs
Position
10:3740181..3753107
Genome browser
AA seq
1326 aa
AA seq
DB search
MAVQNRNAVLVLSGRERGARMLGSERLLQQLVEDRTRWMKLQSQKVELPDNPRSTFLLAF
SPDRNLMASTHVNHNIYITDVKTGKCLHSLVGHRRTPWCLTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTEGNIAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSETE
RVRLVRFDPLGHNLLTAIVNPTNQQNDEDSDVPMDSMEMALFRQRSVLRSPPVRRTPILH
NFLHILSSRSSGGTEPREQPPSMPLFQYPGRSDLADRPPQQTCTQHLGLGCLCSRCAATS
RNTQNPSTLQTTDSTHSHSYPHPQPPNQSRPSSDRPSAFSSVHSGAPGSSLHRALSSLRT
SLAMGSTQEPSARLPGTDWSSSLLGTSSGPTLGEAAVSIVGRGIVPPPRTSSSSVGLHSM
HRYPDSSSSSSPIYTSATEGRGLGLSGTDPRQGRASDGTSSGHHPFYDGSQQNNPASIRN
VLQCNLSRYFMEYERMQDLERAGSSRESGTQGPMQDLLSSNVDSERAGPSHRNSAYAGDG
TSSSNLQHNHPNCCRSCHNLLTFNHETQRWERSSQASSASAQEGPHWQMPVPAFEVPAQS
SREESHTTEEGQQPMQSQQPMGLVYNQDTGQWERVYQQATANPSTEAAQEALNPDVDNTD
EDSLRRRLLESSLFPFSRYDMSGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRESIRQRS
LQNRLRTLSTSSDNQAGNPSSTPAEGSDADYEDIEEPGERTRHRMPRNARMSAPSLGRFV
PRRFLLPEYLPYAGIFHERGQSGLATHSSINRVLAGASIGDGQSAVASNIANTTYRLQWW
DFTKFDLPEISNASVNVLVPHCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAVYS
LAPHNLGEMLYTKRFGPNAISVSLSPMGCYVMVGLASRRILLHPTTDHMVAQVFRLQQPH
GGETSIRMVYNVVYPMAPDQRRHVSINSARWLPEPGMGLAYGTSKGDLVICRPVDYRNEG
DSSTDQSSDPLFTASSSSRTRGVERTSRSGWRLDRDMGLMSAIGLQPRQPAPSVTSQGTQ
TPVVRLQNAETQTERELPSTSAFQTIHAPPQLAETSEVQTASTETRPHSEPPDTVAQGAA
SHNPSTHTDSLNTNYGESQVDPGPGEDALSRIRRLMAEGGMTAVVQRERSTTMASMGGFG
NNIVVSHRIHRGSQTPAGAAQTSNPAPSGENSLNTRPNPLPSDNPAPLESHGGTLLSEIP
SRPALPSSGPSAVVFQAPAMEDTMEDSQNEEPHPPSRSGYLANISNNNSNNNESSSRNYP
DDPYSR
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcagaaccggaatgcagtgttggtcctgtctggacgagagcgcggagctcgg
atgttaggatccgagcggctcctgcagcagcttgtggaggacaggacacgctggatgaaa
ctgcagagtcagaaagtggaactccctgataatcctcgctcaactttcttgcttgctttc
agcccagacaggaatctcatggcttccacccatgtcaatcataacatttacatcacggac
gtgaaaacaggaaagtgcctgcactctctggtgggtcaccgtcgtaccccatggtgtttg
actttccatccaacaattccaggcttggtggcttcagggtgccttgatggggaagtgcga
atctgggacctacatggtggtagtgagagctggttcacagaagggaacatagccattgca
tccctggccttccaccccacagcccaactgctgcttattgccaccaataacgagctgcac
ttctgggactggagtcggccagagcccttcgctgtggtcaagactggcagtgagacagag
cgtgtcaggcttgtaaggtttgaccctcttggccacaatctgttgacagctattgtgaac
ccaaccaaccaacagaatgatgaagactctgatgttcccatggacagcatggaaatggcc
ctgttccgccagcgttctgtgctccgttcccctcctgttcgccgcactccaattttgcac
aacttcctgcacatattgtcgtctcgctcctctggaggaacagaaccccgtgaacaacct
cctagcatgcctctgtttcagtatcccgggcggagtgacctagcagatcggcctcctcag
cagacctgcactcagcacctggggcttggttgcctgtgcagtcgctgtgctgccacatct
cgaaacactcagaatccttcaactctgcagacaacagactctacccattctcactcttat
ccacacccacagcctccaaaccaatcacgtccttcctcagacaggccctctgcttttagc
agcgtgcatagcggtgctccaggtagctctctgcacagagcgctgtcatctctcagaact
agtttggctatgggcagcactcaagagccctcagctcggttgccagggactgactggtcc
agtagtttgctaggcaccagttctgggcctacgctgggcgaggcagcagtgagtattgtg
ggaagggggattgtaccccctcccaggaccagctcctcttccgtgggtctgcactccatg
cataggtaccctgatagctcttcctcctcttcacccatctatacgtcggccacagagggt
cgtggcctgggactatctggcactgaccccagacagggcagagccagcgacggaaccagt
agcggccatcaccccttttatgacggctcccaacagaacaacccagcctccatccgcaac
gtactccagtgcaacctgagccgctacttcatggaatacgagcgcatgcaggatctggag
agagcaggttctagtcgggaatcaggcactcaggggcccatgcaggacctgctatccagc
aatgtagactcagagagagcagggccttcacatcggaactcagcatacgctggggatggc
accagcagttccaacctacagcacaaccaccctaactgctgccgctcatgccacaacctc
ctcactttcaaccatgagacccaacgttgggagcgttcaagccaagcttcttctgcctca
gctcaggaagggccccactggcagatgcccgtacctgcctttgaggtacctgcacagagt
tcgagagaagaatctcatactacagaagaggggcagcagccaatgcagagccaacagcct
atgggcctggtatataatcaagacacaggacaatgggagagagtgtatcagcaggccaca
gccaacccctccactgaagcagcacaagaagccttaaacccggatgtggacaatactgat
gaggactccctcagaaggaggcttttggagtcatcgctctttcctttctcccggtatgac
atgtccggttcccgtgatcatcctatttacccagaccctgccaggttgtctccagctgcg
tattatgcccagaggatgattcagtatctgtctaggagagaaagtattcgtcagcgttcc
ttacagaaccgcctgcgcaccctatccacatcctctgataaccaggcgggcaatccttcc
tccacaccagcagagggcagtgatgccgactacgaggacatagaggagcctggagagcgg
acaagacaccgaatgcctcgcaatgcacggatgtctgcgccctcgcttggtcgctttgtg
ccacgaaggttcctgttgcctgaatatcttccttatgctggtattttccacgagagaggt
cagtcgggcctggcaacccactcctccattaacagagtattagcaggagcttcaattggt
gatgggcagtctgcagttgccagtaacatcgccaacaccacctacagactgcagtggtgg
gatttcaccaagttcgacctgcctgagatcagcaatgcttctgtgaacgtcctggttcca
cactgcaaaatatataatgatgctagctgcgatatatcagcagacgggcagctcctggct
gtttttatacccagcagccagcggggctttccagatgagggcatccttgctgtctactct
cttgcacctcacaacctgggagagatgctctatacaaagcgattcggtcccaatgccatc
tctgtgagcttgtctccgatgggttgctatgtgatggtgggcctggcatcacgcagaatc
ctgctccatcctaccactgaccacatggtggcgcaagtgttccgtctgcagcagcctcat
ggaggagaaacttccattaggatggtgtataatgtggtgtaccctatggctccagaccag
cgtagacatgtgagcattaactctgcacgctggcttcctgaacctggcatgggtctggcc
tacgggaccagcaaaggagacctggtcatctgcagacctgttgattaccgtaatgaggga
gacagcagcaccgatcagagctcagatcctctgttcactgccagcagtagcagtcggaca
cgcggagtggaacggacaagcaggtctggctggcgattggacagagacatgggattaatg
agtgctattggcctgcaaccccgtcagcccgccccctcagtgacctcccagggcacgcag
acacccgtggtccgtctgcagaacgcagagacacagacagagagagagctgccctcgaca
agtgcatttcagaccatacacgcaccgccacagttggcagagaccagtgaagtgcagact
gccagtactgagacacgcccacacagtgagccaccagacacagtggctcaaggagctgct
tctcacaatcccagcacccacactgactcactgaacaccaactacggagagtcccaggtg
gatcctggtccaggtgaagatgctctttcccggatccggcgtctgatggctgaaggtggg
atgacggctgtggtccagagagagcgcagcaccaccatggcctctatgggaggcttcggc
aacaacatagtggtgagtcaccgtattcaccgtggctctcagacaccagcaggagcagca
cagacgagtaatccagcaccttcaggggaaaacagcctcaacacaagaccaaacccgctc
ccctctgacaatcctgcacctcttgagtcccatggtggcactcttctatcagaaattccc
tctaggcctgctcttccctcttctggccctagtgcagtagtgttccaggctccggccatg
gaggacacgatggaggacagtcagaatgaagaacctcatccaccttctaggagtgggtac
ttggctaacatcagtaacaacaacagcaacaacaatgagagtagcagcagaaattacccc
gatgacccgtacagcagatag
DBGET
integrated database retrieval system
